| Definition | Bifidobacterium longum subsp. infantis ATCC 15697, complete genome. |
|---|---|
| Accession | NC_011593 |
| Length | 2,832,748 |
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The map label for this gene is 213691670
Identifier: 213691670
GI number: 213691670
Start: 897240
End: 898976
Strand: Reverse
Name: 213691670
Synonym: Blon_0775
Alternate gene names: NA
Gene position: 898976-897240 (Counterclockwise)
Preceding gene: 213691679
Following gene: 213691668
Centisome position: 31.74
GC content: 63.9
Gene sequence:
>1737_bases ATGGACGACAACGCGATTCACGAGTGGCTGATCAAATGCTTCGGCCCCATTCAGGGTGAGATGGCCTGGCAGCAGATCAG CCAGTTGCCTGAGGAGATCCGTGAACAGCTGATGAGTCAGGACCCCAGCCGGCTGCCCAATCCATCCGAAGTCCAGCAGA TGATGGCCGCGTTCAGCGCCGGCGGACTCAACACGATGGGCGATATGCAGCGCACTGTCGAGGAAGGGCCGATCAACGTC AAGCTCGCCAAGTCGATTGCCTTGCAGCAGGCCAACACCTCCGGTTCCGCGTCCAGCGTGTCCGCCGTGGATGGCGAGGC GGCTCGCCGCGCGATGAGTGAGGCGAACCTGTGGCTGGATACCGCCTGCGAGTTCAATCCCGCGCCCGGCGATCCGGATG TGCTGACCCGCGCCGGCTGGGTGGAGGGCACCATCGACCAGTGGGCGAAGTTCGCAGCTCCTGTGGCCGAGTCGATGAAC GACGCTTTGGCTTCGGTGATTTCAGAGCGTCTTGGCGGCGCGTTCGGCGATGGCGAGATCGCCGGCATGTTCGCCGGACC GGTGCCGATTCCGATTCCCGACGGCATGAAAGACCCAGCCCAACTGATGAAGCTGCTGGGAAACACGTCCTTTGCCATGC AGCTGGGGCATGCGGCCGGCAATCTGAGCCATGAAGTGCATGGCAGTTTCGATCAGGGCATCGCATTGCTGAAGAATCCG GCTGGTGGACTGATTGCCCAGAACGCCACCGAATACGCGAGGATGCTGAACGGTGAGGCTTCTGCGGCCAAGGCCGACAC GGCCGGCACTTCGGTGGACGCGACCAATCCGTTCTCCGCCTCCACCGACGCTTCCGCCAATCCCATTGGCTTCACTTCGG CCGGCAACAGCGATACTCCGGCAACTGACGGTACCGCCCAAGTCTCCGGCTCCGACGCCTCCGCCGACGCCGCCGCGTTC GAGGCTGCGCTCTCCGGATTCGAGACCACCGAGAAAATCCCCGAATCTGAAGTGCTTTCCTTCCTGGCCCTGCAGGAAAT GGCTCACGCCCGCCTGTATGCCTCGGTACCGTGGCTGATGCCGCGTTTCGAGGCGCTCATCGGCAAGTACGCACGCGGCA TCTCCATCGACCTGGATGCGATGGAGGAACAGCTGCGTGACGCCACGTCGATGGATCCGGAGTCGATCTCCGGCGCGGTG AACCTCACCAAGGTCGGCATCCCCGACACCCCCGAACAGCGCGAGGCGCTCTCTTCGCTGGAATCGTTGCTGGCGATGGT CGAGGGCTGGGTGGATTGCGTGGTGTGGCGCGCCGGCATGGCCCACCTGCCGCATATCGAACAGTTGCGGGAGATGCTGC GCCGAGAACGGGCGATGGGCGGCCCGGCCGAACGCACGTTCGAGAGTCTGCTCGGCCTGCAGCTTCGCCCCAAGCGCATG CGCGAGGCCGCCGGATTGTGGGAGATGATCACCGCCGCCGAAGGCCCTGAAGGCCGTGACGCCAAGTGGTCGCATCCCGA TCTGCTGCCTTCGCTGCCTAGCGACAAGCCCGCAGTTGGCGCGTCTCCGTCGTCCGACGCCCCTTCAGGCTCCTCTTCCG ATGCCAACGGTTCCGCTTCCCACCCTGCCGCAGACGGCAAGACCGGCGATATCGATTGGGATGCCGAACTGTCTAAGCTG CTCGGCGAAGATGGCGAAGACAGTGAAAACGGCAACTCGGAGGATACGCAGGCATAG
Upstream 100 bases:
>100_bases CGAAAACGAACATAAACCGAAAATATTGCTCGGCCACAAGCGAACAGGCCCGGGCAGACCCTACACTTGGGGTAACACAC CGCGGCAAAGAAGGATACGC
Downstream 100 bases:
>100_bases TCAACCGGCCTTCAGCCAATTCCCGCTCCTGAATGTTCAGGAGCATTCAGTATGCATGAACGACGCCCGTCACAAAAATC GTGATGGGCGTCTGTGTTGC
Product: narrowly conserved hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 578; Mature: 578
Protein sequence:
>578_residues MDDNAIHEWLIKCFGPIQGEMAWQQISQLPEEIREQLMSQDPSRLPNPSEVQQMMAAFSAGGLNTMGDMQRTVEEGPINV KLAKSIALQQANTSGSASSVSAVDGEAARRAMSEANLWLDTACEFNPAPGDPDVLTRAGWVEGTIDQWAKFAAPVAESMN DALASVISERLGGAFGDGEIAGMFAGPVPIPIPDGMKDPAQLMKLLGNTSFAMQLGHAAGNLSHEVHGSFDQGIALLKNP AGGLIAQNATEYARMLNGEASAAKADTAGTSVDATNPFSASTDASANPIGFTSAGNSDTPATDGTAQVSGSDASADAAAF EAALSGFETTEKIPESEVLSFLALQEMAHARLYASVPWLMPRFEALIGKYARGISIDLDAMEEQLRDATSMDPESISGAV NLTKVGIPDTPEQREALSSLESLLAMVEGWVDCVVWRAGMAHLPHIEQLREMLRRERAMGGPAERTFESLLGLQLRPKRM REAAGLWEMITAAEGPEGRDAKWSHPDLLPSLPSDKPAVGASPSSDAPSGSSSDANGSASHPAADGKTGDIDWDAELSKL LGEDGEDSENGNSEDTQA
Sequences:
>Translated_578_residues MDDNAIHEWLIKCFGPIQGEMAWQQISQLPEEIREQLMSQDPSRLPNPSEVQQMMAAFSAGGLNTMGDMQRTVEEGPINV KLAKSIALQQANTSGSASSVSAVDGEAARRAMSEANLWLDTACEFNPAPGDPDVLTRAGWVEGTIDQWAKFAAPVAESMN DALASVISERLGGAFGDGEIAGMFAGPVPIPIPDGMKDPAQLMKLLGNTSFAMQLGHAAGNLSHEVHGSFDQGIALLKNP AGGLIAQNATEYARMLNGEASAAKADTAGTSVDATNPFSASTDASANPIGFTSAGNSDTPATDGTAQVSGSDASADAAAF EAALSGFETTEKIPESEVLSFLALQEMAHARLYASVPWLMPRFEALIGKYARGISIDLDAMEEQLRDATSMDPESISGAV NLTKVGIPDTPEQREALSSLESLLAMVEGWVDCVVWRAGMAHLPHIEQLREMLRRERAMGGPAERTFESLLGLQLRPKRM REAAGLWEMITAAEGPEGRDAKWSHPDLLPSLPSDKPAVGASPSSDAPSGSSSDANGSASHPAADGKTGDIDWDAELSKL LGEDGEDSENGNSEDTQA >Mature_578_residues MDDNAIHEWLIKCFGPIQGEMAWQQISQLPEEIREQLMSQDPSRLPNPSEVQQMMAAFSAGGLNTMGDMQRTVEEGPINV KLAKSIALQQANTSGSASSVSAVDGEAARRAMSEANLWLDTACEFNPAPGDPDVLTRAGWVEGTIDQWAKFAAPVAESMN DALASVISERLGGAFGDGEIAGMFAGPVPIPIPDGMKDPAQLMKLLGNTSFAMQLGHAAGNLSHEVHGSFDQGIALLKNP AGGLIAQNATEYARMLNGEASAAKADTAGTSVDATNPFSASTDASANPIGFTSAGNSDTPATDGTAQVSGSDASADAAAF EAALSGFETTEKIPESEVLSFLALQEMAHARLYASVPWLMPRFEALIGKYARGISIDLDAMEEQLRDATSMDPESISGAV NLTKVGIPDTPEQREALSSLESLLAMVEGWVDCVVWRAGMAHLPHIEQLREMLRRERAMGGPAERTFESLLGLQLRPKRM REAAGLWEMITAAEGPEGRDAKWSHPDLLPSLPSDKPAVGASPSSDAPSGSSSDANGSASHPAADGKTGDIDWDAELSKL LGEDGEDSENGNSEDTQA
Specific function: Unknown
COG id: COG5282
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 60877; Mature: 60877
Theoretical pI: Translated: 4.13; Mature: 4.13
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 4.2 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDDNAIHEWLIKCFGPIQGEMAWQQISQLPEEIREQLMSQDPSRLPNPSEVQQMMAAFSA CCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHC GGLNTMGDMQRTVEEGPINVKLAKSIALQQANTSGSASSVSAVDGEAARRAMSEANLWLD CCCCHHHHHHHHHHCCCCCEEHHHHHHHHHCCCCCCCCCCHHHCHHHHHHHHHHCCCEEE TACEFNPAPGDPDVLTRAGWVEGTIDQWAKFAAPVAESMNDALASVISERLGGAFGDGEI CCCCCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCE AGMFAGPVPIPIPDGMKDPAQLMKLLGNTSFAMQLGHAAGNLSHEVHGSFDQGIALLKNP EEEECCCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHCCCCHHHCCCHHHCHHHHCCC AGGLIAQNATEYARMLNGEASAAKADTAGTSVDATNPFSASTDASANPIGFTSAGNSDTP CCCCHHCCHHHHHHHHCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC ATDGTAQVSGSDASADAAAFEAALSGFETTEKIPESEVLSFLALQEMAHARLYASVPWLM CCCCCEEECCCCCCHHHHHHHHHHHCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCHHH PRFEALIGKYARGISIDLDAMEEQLRDATSMDPESISGAVNLTKVGIPDTPEQREALSSL HHHHHHHHHHHCCCCEEHHHHHHHHHHHCCCCHHHHCCCEEEEECCCCCCHHHHHHHHHH ESLLAMVEGWVDCVVWRAGMAHLPHIEQLREMLRRERAMGGPAERTFESLLGLQLRPKRM HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCHHHH REAAGLWEMITAAEGPEGRDAKWSHPDLLPSLPSDKPAVGASPSSDAPSGSSSDANGSAS HHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC HPAADGKTGDIDWDAELSKLLGEDGEDSENGNSEDTQA CCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MDDNAIHEWLIKCFGPIQGEMAWQQISQLPEEIREQLMSQDPSRLPNPSEVQQMMAAFSA CCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHC GGLNTMGDMQRTVEEGPINVKLAKSIALQQANTSGSASSVSAVDGEAARRAMSEANLWLD CCCCHHHHHHHHHHCCCCCEEHHHHHHHHHCCCCCCCCCCHHHCHHHHHHHHHHCCCEEE TACEFNPAPGDPDVLTRAGWVEGTIDQWAKFAAPVAESMNDALASVISERLGGAFGDGEI CCCCCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCE AGMFAGPVPIPIPDGMKDPAQLMKLLGNTSFAMQLGHAAGNLSHEVHGSFDQGIALLKNP EEEECCCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHCCCCHHHCCCHHHCHHHHCCC AGGLIAQNATEYARMLNGEASAAKADTAGTSVDATNPFSASTDASANPIGFTSAGNSDTP CCCCHHCCHHHHHHHHCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC ATDGTAQVSGSDASADAAAFEAALSGFETTEKIPESEVLSFLALQEMAHARLYASVPWLM CCCCCEEECCCCCCHHHHHHHHHHHCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCHHH PRFEALIGKYARGISIDLDAMEEQLRDATSMDPESISGAVNLTKVGIPDTPEQREALSSL HHHHHHHHHHHCCCCEEHHHHHHHHHHHCCCCHHHHCCCEEEEECCCCCCHHHHHHHHHH ESLLAMVEGWVDCVVWRAGMAHLPHIEQLREMLRRERAMGGPAERTFESLLGLQLRPKRM HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCHHHH REAAGLWEMITAAEGPEGRDAKWSHPDLLPSLPSDKPAVGASPSSDAPSGSSSDANGSAS HHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC HPAADGKTGDIDWDAELSKLLGEDGEDSENGNSEDTQA CCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA