| Definition | Bifidobacterium longum subsp. infantis ATCC 15697, complete genome. |
|---|---|
| Accession | NC_011593 |
| Length | 2,832,748 |
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The map label for this gene is mdeA [H]
Identifier: 213691653
GI number: 213691653
Start: 879810
End: 881105
Strand: Direct
Name: mdeA [H]
Synonym: Blon_0757
Alternate gene names: 213691653
Gene position: 879810-881105 (Clockwise)
Preceding gene: 213691652
Following gene: 213691654
Centisome position: 31.06
GC content: 58.87
Gene sequence:
>1296_bases ATGGCGAGGGATTTCGTTACCGCGGCTATTCACGGCGGCTATGACCGGGCGGCTCACGGTGAGGCGGCGAACCCGCCGAT TTACGCCAGTGCGGCGTTTGACATGGTCAGCGCCGCGCATGGTGACGCGCTGGGTGCCGGCGAAGCTGAGGGCTTCTCGT ACTCGCGTGTGGCGAATCCCACTGTGGATGTGTTCGAGCGTCGTTTGGCGGAACTCGAAGGTGGTGTGAGCGCGGTGGCC GTCGCCTCCGGCATGGCCGCGGTGTCGTATGCGCTGTTGTGTGCCGCCGAAGGTGGTGGTCGCATCATCTCTCCGACCAA CCTGTACGGCGCTTCCGTCGATGCCATGGAGACCTTCTTCCCGCAGTTCGGAGTCCATGCCGATTTCGTGCGCGACATCA ACGACCTCGATGAGGTCGCTTCGAAGATCGGGCCGGACACCCGTGCCATCTACACCGAATCCGTTGCAAATCCATCCACT GAAATCACCGATATTGAACCATTGGCGGAACTCGCGCATCGCAACGGTATTCCGCTTATCGTCGACAATACCGTGCCTAC CCCGTACCTCTTCCGGCCCATCGAGTTCGGAGCCGATATCGTGGTGCATTCCACCACGAAAGGCATCACCGGGCACGGCA ACGCCATCGGCGGAGTGGTTATCGACGGCGGAAACTTCGATTGGGCCAACGGCAGATTCCCGCAGTTCACCACTCCCGAA CTGGTCGTCAGCGATGAACGCAAAGGAATAGCGCGCAGCTTCGCCAGCAGATTCGGCCGCGAGGCGTTCATTCGCCGTGT ACGCATCAAATATCTGCGCACTTTCGGCGCGGTGCCCAGCCCGTTCAATACATACCTGTCGATGGTGGGATTGGAGACAC TGGCTGTGCGTGAACGGCAGGAAGTCGAATCGGCCATGCATATTGCCGAGCATCTCACGCATGCGCCGCATGTGCTCAAG GTCAATTATTCCGGTTTGGGCAACACGGGTCAGTATGATCTGGTCGCCAAATACTTCCCCAAAGGGATCGGTACGATACT GTCGTTCCTCGTCGACGGCGATGAGAACAACGTGAGACGCATTCTCGACGGAACCGAGGTATTCTCCTATGTGCCGAACA TCGGTGACGCGCGTTCGCTGATTGTCGATCCGGCGCGCATCACCCATCGTGAAGTGCCGTTGGAATATCGGCATGCCGCG GGCGTAAGCGACAACCTTATCCGCCTGTCCATCGGATTGGAAAACGTCGATGATTTGATTGCGGACCTTGACCAAGCCAT TGCCAACGCATACTGA
Upstream 100 bases:
>100_bases CGTGTTACGGTGCTTCGCTTCCTACACTGGTGCCGTATCAGTATGGGCGTCCGTCGGTGTTCCCCTAAGGGACGGCGGCA TGACATTGAGGGGATAATTC
Downstream 100 bases:
>100_bases CGTGTATCGCTTACGTATGCGGATAATTGTTCGTTCTGAGAAAAACCTGCGCTGTTATTCTTGAGGCGTTGTGAATTTGG GTTGTTGTATTACGAAAGAA
Product: Cysteine synthase
Products: NA
Alternate protein names: L-methioninase [H]
Number of amino acids: Translated: 431; Mature: 430
Protein sequence:
>431_residues MARDFVTAAIHGGYDRAAHGEAANPPIYASAAFDMVSAAHGDALGAGEAEGFSYSRVANPTVDVFERRLAELEGGVSAVA VASGMAAVSYALLCAAEGGGRIISPTNLYGASVDAMETFFPQFGVHADFVRDINDLDEVASKIGPDTRAIYTESVANPST EITDIEPLAELAHRNGIPLIVDNTVPTPYLFRPIEFGADIVVHSTTKGITGHGNAIGGVVIDGGNFDWANGRFPQFTTPE LVVSDERKGIARSFASRFGREAFIRRVRIKYLRTFGAVPSPFNTYLSMVGLETLAVRERQEVESAMHIAEHLTHAPHVLK VNYSGLGNTGQYDLVAKYFPKGIGTILSFLVDGDENNVRRILDGTEVFSYVPNIGDARSLIVDPARITHREVPLEYRHAA GVSDNLIRLSIGLENVDDLIADLDQAIANAY
Sequences:
>Translated_431_residues MARDFVTAAIHGGYDRAAHGEAANPPIYASAAFDMVSAAHGDALGAGEAEGFSYSRVANPTVDVFERRLAELEGGVSAVA VASGMAAVSYALLCAAEGGGRIISPTNLYGASVDAMETFFPQFGVHADFVRDINDLDEVASKIGPDTRAIYTESVANPST EITDIEPLAELAHRNGIPLIVDNTVPTPYLFRPIEFGADIVVHSTTKGITGHGNAIGGVVIDGGNFDWANGRFPQFTTPE LVVSDERKGIARSFASRFGREAFIRRVRIKYLRTFGAVPSPFNTYLSMVGLETLAVRERQEVESAMHIAEHLTHAPHVLK VNYSGLGNTGQYDLVAKYFPKGIGTILSFLVDGDENNVRRILDGTEVFSYVPNIGDARSLIVDPARITHREVPLEYRHAA GVSDNLIRLSIGLENVDDLIADLDQAIANAY >Mature_430_residues ARDFVTAAIHGGYDRAAHGEAANPPIYASAAFDMVSAAHGDALGAGEAEGFSYSRVANPTVDVFERRLAELEGGVSAVAV ASGMAAVSYALLCAAEGGGRIISPTNLYGASVDAMETFFPQFGVHADFVRDINDLDEVASKIGPDTRAIYTESVANPSTE ITDIEPLAELAHRNGIPLIVDNTVPTPYLFRPIEFGADIVVHSTTKGITGHGNAIGGVVIDGGNFDWANGRFPQFTTPEL VVSDERKGIARSFASRFGREAFIRRVRIKYLRTFGAVPSPFNTYLSMVGLETLAVRERQEVESAMHIAEHLTHAPHVLKV NYSGLGNTGQYDLVAKYFPKGIGTILSFLVDGDENNVRRILDGTEVFSYVPNIGDARSLIVDPARITHREVPLEYRHAAG VSDNLIRLSIGLENVDDLIADLDQAIANAY
Specific function: Methionine biosynthesis; second step. [C]
COG id: COG2873
COG function: function code E; O-acetylhomoserine sulfhydrylase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the trans-sulfuration enzymes family [H]
Homologues:
Organism=Homo sapiens, GI21361334, Length=432, Percent_Identity=32.4074074074074, Blast_Score=188, Evalue=9e-48, Organism=Homo sapiens, GI299473759, Length=432, Percent_Identity=31.25, Blast_Score=164, Evalue=2e-40, Organism=Homo sapiens, GI25453487, Length=431, Percent_Identity=28.538283062645, Blast_Score=133, Evalue=3e-31, Organism=Escherichia coli, GI1790375, Length=424, Percent_Identity=30.8962264150943, Blast_Score=188, Evalue=5e-49, Organism=Escherichia coli, GI1789383, Length=407, Percent_Identity=27.2727272727273, Blast_Score=128, Evalue=7e-31, Organism=Caenorhabditis elegans, GI17538055, Length=430, Percent_Identity=32.5581395348837, Blast_Score=187, Evalue=9e-48, Organism=Caenorhabditis elegans, GI17560056, Length=384, Percent_Identity=34.1145833333333, Blast_Score=179, Evalue=4e-45, Organism=Caenorhabditis elegans, GI71980708, Length=407, Percent_Identity=29.7297297297297, Blast_Score=163, Evalue=2e-40, Organism=Saccharomyces cerevisiae, GI6323333, Length=447, Percent_Identity=35.7941834451902, Blast_Score=247, Evalue=2e-66, Organism=Saccharomyces cerevisiae, GI6319307, Length=434, Percent_Identity=32.4884792626728, Blast_Score=199, Evalue=6e-52, Organism=Saccharomyces cerevisiae, GI6321254, Length=449, Percent_Identity=26.5033407572383, Blast_Score=115, Evalue=1e-26, Organism=Saccharomyces cerevisiae, GI6321170, Length=196, Percent_Identity=29.0816326530612, Blast_Score=94, Evalue=6e-20, Organism=Saccharomyces cerevisiae, GI6321904, Length=435, Percent_Identity=25.9770114942529, Blast_Score=88, Evalue=3e-18, Organism=Drosophila melanogaster, GI19922554, Length=426, Percent_Identity=32.6291079812207, Blast_Score=201, Evalue=9e-52,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000277 - InterPro: IPR006237 - InterPro: IPR015424 - InterPro: IPR015421 - InterPro: IPR015422 [H]
Pfam domain/function: PF01053 Cys_Met_Meta_PP [H]
EC number: =4.4.1.11 [H]
Molecular weight: Translated: 46352; Mature: 46220
Theoretical pI: Translated: 4.83; Mature: 4.83
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MARDFVTAAIHGGYDRAAHGEAANPPIYASAAFDMVSAAHGDALGAGEAEGFSYSRVANP CCCHHEEHHHCCCCCCCCCCCCCCCCEEEHHHHHHHHHHCCCCCCCCCCCCCCCHHCCCC TVDVFERRLAELEGGVSAVAVASGMAAVSYALLCAAEGGGRIISPTNLYGASVDAMETFF HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHEEECCCCEEECCCCCCCCCHHHHHHHH PQFGVHADFVRDINDLDEVASKIGPDTRAIYTESVANPSTEITDIEPLAELAHRNGIPLI HHHCCCHHHHHHHHHHHHHHHHHCCCCCEEEEHHCCCCCCCCCCHHHHHHHHHCCCCCEE VDNTVPTPYLFRPIEFGADIVVHSTTKGITGHGNAIGGVVIDGGNFDWANGRFPQFTTPE ECCCCCCCCEEEHHHCCCEEEEECCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCC LVVSDERKGIARSFASRFGREAFIRRVRIKYLRTFGAVPSPFNTYLSMVGLETLAVRERQ EEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHH EVESAMHIAEHLTHAPHVLKVNYSGLGNTGQYDLVAKYFPKGIGTILSFLVDGDENNVRR HHHHHHHHHHHHCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHH ILDGTEVFSYVPNIGDARSLIVDPARITHREVPLEYRHAAGVSDNLIRLSIGLENVDDLI HHHHHHHHHHCCCCCCCHHEEECCHHHHHHCCCCHHHHHCCCCCCEEEEEECCCHHHHHH ADLDQAIANAY HHHHHHHHCCC >Mature Secondary Structure ARDFVTAAIHGGYDRAAHGEAANPPIYASAAFDMVSAAHGDALGAGEAEGFSYSRVANP CCHHEEHHHCCCCCCCCCCCCCCCCEEEHHHHHHHHHHCCCCCCCCCCCCCCCHHCCCC TVDVFERRLAELEGGVSAVAVASGMAAVSYALLCAAEGGGRIISPTNLYGASVDAMETFF HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHEEECCCCEEECCCCCCCCCHHHHHHHH PQFGVHADFVRDINDLDEVASKIGPDTRAIYTESVANPSTEITDIEPLAELAHRNGIPLI HHHCCCHHHHHHHHHHHHHHHHHCCCCCEEEEHHCCCCCCCCCCHHHHHHHHHCCCCCEE VDNTVPTPYLFRPIEFGADIVVHSTTKGITGHGNAIGGVVIDGGNFDWANGRFPQFTTPE ECCCCCCCCEEEHHHCCCEEEEECCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCC LVVSDERKGIARSFASRFGREAFIRRVRIKYLRTFGAVPSPFNTYLSMVGLETLAVRERQ EEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHH EVESAMHIAEHLTHAPHVLKVNYSGLGNTGQYDLVAKYFPKGIGTILSFLVDGDENNVRR HHHHHHHHHHHHCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHH ILDGTEVFSYVPNIGDARSLIVDPARITHREVPLEYRHAAGVSDNLIRLSIGLENVDDLI HHHHHHHHHHCCCCCCCHHEEECCHHHHHHCCCCHHHHHCCCCCCEEEEEECCCHHHHHH ADLDQAIANAY HHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8586629; 9190812; 3365412 [H]