Definition Bifidobacterium longum subsp. infantis ATCC 15697, complete genome.
Accession NC_011593
Length 2,832,748

Click here to switch to the map view.

The map label for this gene is glnH [H]

Identifier: 213691643

GI number: 213691643

Start: 867844

End: 868746

Strand: Direct

Name: glnH [H]

Synonym: Blon_0747

Alternate gene names: 213691643

Gene position: 867844-868746 (Clockwise)

Preceding gene: 213691642

Following gene: 213691644

Centisome position: 30.64

GC content: 60.8

Gene sequence:

>903_bases
ATGAGTATCAAGGTTGGGAGATCATTCAAAGCACTGATTGCCGCAGGTGCGGCATTGGTAATGGCGGCATCCATGGCCGC
ATGCGGTCCGTCCGCAGGCACCCCGAGCGAAGCGAAGTCCTCTGACACAGGCACCAGCTCCGGCGCCAACGCCAAGGCCC
GCAGCCTCGACGAGATCAAGAAGAGCGGCAAGATCAAGATTGCCGTCTTCTCCGACAAGGCACCATTCGGCTACGTGGAC
AAGGACGGCAAGTACCAGGGCTATGACGTCTACTTCGCCGAACGACTGGCCAAGGATCTGGGCGTGAAGCCGGAATACAC
GTCGGTCGATCCGGCCGCCCGCGTGGATGTGCTCACCTCCAACAAGGTCGATCTGGTGCTCGCCAACTTCACCGTCACCG
AGGAGCGCAAGGAGAAGGTCGACTTCGCCAAGCCGTACATGAAGGTGGCGCTCGGCGTGGTCTCCCCGCAGAACGCGCCG
ATCACCGATGTCGGCCAGCTCGACGGCAAGACCCTGATCATCGCCAAGGGCACCACCGCCGAAACCTGGTTCGAGAAGAA
CGCGCCGAACGTCAAGCTGCAGAAGTACGACCAGTACGCCGATGCCTACAACGCACTGCTGGACGGCCGTGGTGACGCCT
TCTCCACCGACAACACCGAGGTGCTCGCCTGGGCCAAGTCCAACAAGGGATTCAAGGTCGGCATCACCCACCTTGGTGAC
GACGACACCATCGCCCCAGCGGTGCAGAAGGGCAACAAGGAACTGCTGGACTTCGTGAACGATGAGATCGTCAAACTCGG
CAAGGACGACTTCTTCCACAAGGATTACCAGGAGACCCTGGCACCGGTGTACGGCGACGAGGTCAATCCCGACGAGATCG
TGGTCGAAGGCGGTGAGGTCTGA

Upstream 100 bases:

>100_bases
CGCAGCAGTTCCTGCACACCTTCGAATTCGAGTGATTCGATTGTGCCATATCGACGTATTTGAGAAGAAATATCAATAAC
AACAAGAGAAGGAGAACTCA

Downstream 100 bases:

>100_bases
CGGACGGGTTCCGTCCAGCCGTTTGAACCGGATGGGGAACTGGATTATATCGCTTCATAACCAACGCATATAGCAACGCC
GGCCTTCGGGCCGGCGTTCT

Product: extracellular solute-binding protein, family 3

Products: NA

Alternate protein names: GlnBP [H]

Number of amino acids: Translated: 300; Mature: 299

Protein sequence:

>300_residues
MSIKVGRSFKALIAAGAALVMAASMAACGPSAGTPSEAKSSDTGTSSGANAKARSLDEIKKSGKIKIAVFSDKAPFGYVD
KDGKYQGYDVYFAERLAKDLGVKPEYTSVDPAARVDVLTSNKVDLVLANFTVTEERKEKVDFAKPYMKVALGVVSPQNAP
ITDVGQLDGKTLIIAKGTTAETWFEKNAPNVKLQKYDQYADAYNALLDGRGDAFSTDNTEVLAWAKSNKGFKVGITHLGD
DDTIAPAVQKGNKELLDFVNDEIVKLGKDDFFHKDYQETLAPVYGDEVNPDEIVVEGGEV

Sequences:

>Translated_300_residues
MSIKVGRSFKALIAAGAALVMAASMAACGPSAGTPSEAKSSDTGTSSGANAKARSLDEIKKSGKIKIAVFSDKAPFGYVD
KDGKYQGYDVYFAERLAKDLGVKPEYTSVDPAARVDVLTSNKVDLVLANFTVTEERKEKVDFAKPYMKVALGVVSPQNAP
ITDVGQLDGKTLIIAKGTTAETWFEKNAPNVKLQKYDQYADAYNALLDGRGDAFSTDNTEVLAWAKSNKGFKVGITHLGD
DDTIAPAVQKGNKELLDFVNDEIVKLGKDDFFHKDYQETLAPVYGDEVNPDEIVVEGGEV
>Mature_299_residues
SIKVGRSFKALIAAGAALVMAASMAACGPSAGTPSEAKSSDTGTSSGANAKARSLDEIKKSGKIKIAVFSDKAPFGYVDK
DGKYQGYDVYFAERLAKDLGVKPEYTSVDPAARVDVLTSNKVDLVLANFTVTEERKEKVDFAKPYMKVALGVVSPQNAPI
TDVGQLDGKTLIIAKGTTAETWFEKNAPNVKLQKYDQYADAYNALLDGRGDAFSTDNTEVLAWAKSNKGFKVGITHLGDD
DTIAPAVQKGNKELLDFVNDEIVKLGKDDFFHKDYQETLAPVYGDEVNPDEIVVEGGEV

Specific function: Involved in glutamine-transport system. Interacts with the glutamine-transport system glnPQ [H]

COG id: COG0834

COG function: function code ET; ABC-type amino acid transport/signal transduction systems, periplasmic component/domain

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 3 family [H]

Homologues:

Organism=Escherichia coli, GI1788228, Length=248, Percent_Identity=30.241935483871, Blast_Score=98, Evalue=7e-22,
Organism=Escherichia coli, GI1787085, Length=215, Percent_Identity=26.5116279069767, Blast_Score=79, Evalue=4e-16,
Organism=Escherichia coli, GI1787031, Length=221, Percent_Identity=31.2217194570136, Blast_Score=79, Evalue=4e-16,
Organism=Escherichia coli, GI1787088, Length=216, Percent_Identity=27.7777777777778, Blast_Score=79, Evalue=5e-16,

Paralogues:

None

Copy number: 1920 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 1060 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 80 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015683
- InterPro:   IPR001638
- InterPro:   IPR018313 [H]

Pfam domain/function: PF00497 SBP_bac_3 [H]

EC number: NA

Molecular weight: Translated: 32194; Mature: 32063

Theoretical pI: Translated: 4.80; Mature: 4.80

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSIKVGRSFKALIAAGAALVMAASMAACGPSAGTPSEAKSSDTGTSSGANAKARSLDEIK
CCEECCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHH
KSGKIKIAVFSDKAPFGYVDKDGKYQGYDVYFAERLAKDLGVKPEYTSVDPAARVDVLTS
HCCCEEEEEEECCCCCCCCCCCCCCCCEEHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEC
NKVDLVLANFTVTEERKEKVDFAKPYMKVALGVVSPQNAPITDVGQLDGKTLIIAKGTTA
CCEEEEEEEEEECHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHCCCCCEEEEECCCCH
ETWFEKNAPNVKLQKYDQYADAYNALLDGRGDAFSTDNTEVLAWAKSNKGFKVGITHLGD
HHHHHCCCCCCEEHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEECCCCEEEEEEECCC
DDTIAPAVQKGNKELLDFVNDEIVKLGKDDFFHKDYQETLAPVYGDEVNPDEIVVEGGEV
CCCHHHHHHCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCEEEEECCCC
>Mature Secondary Structure 
SIKVGRSFKALIAAGAALVMAASMAACGPSAGTPSEAKSSDTGTSSGANAKARSLDEIK
CEECCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHH
KSGKIKIAVFSDKAPFGYVDKDGKYQGYDVYFAERLAKDLGVKPEYTSVDPAARVDVLTS
HCCCEEEEEEECCCCCCCCCCCCCCCCEEHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEC
NKVDLVLANFTVTEERKEKVDFAKPYMKVALGVVSPQNAPITDVGQLDGKTLIIAKGTTA
CCEEEEEEEEEECHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHCCCCCEEEEECCCCH
ETWFEKNAPNVKLQKYDQYADAYNALLDGRGDAFSTDNTEVLAWAKSNKGFKVGITHLGD
HHHHHCCCCCCEEHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEECCCCEEEEEEECCC
DDTIAPAVQKGNKELLDFVNDEIVKLGKDDFFHKDYQETLAPVYGDEVNPDEIVVEGGEV
CCCHHHHHHCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 1856180 [H]