| Definition | Bifidobacterium longum subsp. infantis ATCC 15697, complete genome. |
|---|---|
| Accession | NC_011593 |
| Length | 2,832,748 |
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The map label for this gene is glnH [H]
Identifier: 213691643
GI number: 213691643
Start: 867844
End: 868746
Strand: Direct
Name: glnH [H]
Synonym: Blon_0747
Alternate gene names: 213691643
Gene position: 867844-868746 (Clockwise)
Preceding gene: 213691642
Following gene: 213691644
Centisome position: 30.64
GC content: 60.8
Gene sequence:
>903_bases ATGAGTATCAAGGTTGGGAGATCATTCAAAGCACTGATTGCCGCAGGTGCGGCATTGGTAATGGCGGCATCCATGGCCGC ATGCGGTCCGTCCGCAGGCACCCCGAGCGAAGCGAAGTCCTCTGACACAGGCACCAGCTCCGGCGCCAACGCCAAGGCCC GCAGCCTCGACGAGATCAAGAAGAGCGGCAAGATCAAGATTGCCGTCTTCTCCGACAAGGCACCATTCGGCTACGTGGAC AAGGACGGCAAGTACCAGGGCTATGACGTCTACTTCGCCGAACGACTGGCCAAGGATCTGGGCGTGAAGCCGGAATACAC GTCGGTCGATCCGGCCGCCCGCGTGGATGTGCTCACCTCCAACAAGGTCGATCTGGTGCTCGCCAACTTCACCGTCACCG AGGAGCGCAAGGAGAAGGTCGACTTCGCCAAGCCGTACATGAAGGTGGCGCTCGGCGTGGTCTCCCCGCAGAACGCGCCG ATCACCGATGTCGGCCAGCTCGACGGCAAGACCCTGATCATCGCCAAGGGCACCACCGCCGAAACCTGGTTCGAGAAGAA CGCGCCGAACGTCAAGCTGCAGAAGTACGACCAGTACGCCGATGCCTACAACGCACTGCTGGACGGCCGTGGTGACGCCT TCTCCACCGACAACACCGAGGTGCTCGCCTGGGCCAAGTCCAACAAGGGATTCAAGGTCGGCATCACCCACCTTGGTGAC GACGACACCATCGCCCCAGCGGTGCAGAAGGGCAACAAGGAACTGCTGGACTTCGTGAACGATGAGATCGTCAAACTCGG CAAGGACGACTTCTTCCACAAGGATTACCAGGAGACCCTGGCACCGGTGTACGGCGACGAGGTCAATCCCGACGAGATCG TGGTCGAAGGCGGTGAGGTCTGA
Upstream 100 bases:
>100_bases CGCAGCAGTTCCTGCACACCTTCGAATTCGAGTGATTCGATTGTGCCATATCGACGTATTTGAGAAGAAATATCAATAAC AACAAGAGAAGGAGAACTCA
Downstream 100 bases:
>100_bases CGGACGGGTTCCGTCCAGCCGTTTGAACCGGATGGGGAACTGGATTATATCGCTTCATAACCAACGCATATAGCAACGCC GGCCTTCGGGCCGGCGTTCT
Product: extracellular solute-binding protein, family 3
Products: NA
Alternate protein names: GlnBP [H]
Number of amino acids: Translated: 300; Mature: 299
Protein sequence:
>300_residues MSIKVGRSFKALIAAGAALVMAASMAACGPSAGTPSEAKSSDTGTSSGANAKARSLDEIKKSGKIKIAVFSDKAPFGYVD KDGKYQGYDVYFAERLAKDLGVKPEYTSVDPAARVDVLTSNKVDLVLANFTVTEERKEKVDFAKPYMKVALGVVSPQNAP ITDVGQLDGKTLIIAKGTTAETWFEKNAPNVKLQKYDQYADAYNALLDGRGDAFSTDNTEVLAWAKSNKGFKVGITHLGD DDTIAPAVQKGNKELLDFVNDEIVKLGKDDFFHKDYQETLAPVYGDEVNPDEIVVEGGEV
Sequences:
>Translated_300_residues MSIKVGRSFKALIAAGAALVMAASMAACGPSAGTPSEAKSSDTGTSSGANAKARSLDEIKKSGKIKIAVFSDKAPFGYVD KDGKYQGYDVYFAERLAKDLGVKPEYTSVDPAARVDVLTSNKVDLVLANFTVTEERKEKVDFAKPYMKVALGVVSPQNAP ITDVGQLDGKTLIIAKGTTAETWFEKNAPNVKLQKYDQYADAYNALLDGRGDAFSTDNTEVLAWAKSNKGFKVGITHLGD DDTIAPAVQKGNKELLDFVNDEIVKLGKDDFFHKDYQETLAPVYGDEVNPDEIVVEGGEV >Mature_299_residues SIKVGRSFKALIAAGAALVMAASMAACGPSAGTPSEAKSSDTGTSSGANAKARSLDEIKKSGKIKIAVFSDKAPFGYVDK DGKYQGYDVYFAERLAKDLGVKPEYTSVDPAARVDVLTSNKVDLVLANFTVTEERKEKVDFAKPYMKVALGVVSPQNAPI TDVGQLDGKTLIIAKGTTAETWFEKNAPNVKLQKYDQYADAYNALLDGRGDAFSTDNTEVLAWAKSNKGFKVGITHLGDD DTIAPAVQKGNKELLDFVNDEIVKLGKDDFFHKDYQETLAPVYGDEVNPDEIVVEGGEV
Specific function: Involved in glutamine-transport system. Interacts with the glutamine-transport system glnPQ [H]
COG id: COG0834
COG function: function code ET; ABC-type amino acid transport/signal transduction systems, periplasmic component/domain
Gene ontology:
Cell location: Cell membrane; Lipid-anchor (Probable) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bacterial solute-binding protein 3 family [H]
Homologues:
Organism=Escherichia coli, GI1788228, Length=248, Percent_Identity=30.241935483871, Blast_Score=98, Evalue=7e-22, Organism=Escherichia coli, GI1787085, Length=215, Percent_Identity=26.5116279069767, Blast_Score=79, Evalue=4e-16, Organism=Escherichia coli, GI1787031, Length=221, Percent_Identity=31.2217194570136, Blast_Score=79, Evalue=4e-16, Organism=Escherichia coli, GI1787088, Length=216, Percent_Identity=27.7777777777778, Blast_Score=79, Evalue=5e-16,
Paralogues:
None
Copy number: 1920 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 1060 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 80 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR015683 - InterPro: IPR001638 - InterPro: IPR018313 [H]
Pfam domain/function: PF00497 SBP_bac_3 [H]
EC number: NA
Molecular weight: Translated: 32194; Mature: 32063
Theoretical pI: Translated: 4.80; Mature: 4.80
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSIKVGRSFKALIAAGAALVMAASMAACGPSAGTPSEAKSSDTGTSSGANAKARSLDEIK CCEECCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHH KSGKIKIAVFSDKAPFGYVDKDGKYQGYDVYFAERLAKDLGVKPEYTSVDPAARVDVLTS HCCCEEEEEEECCCCCCCCCCCCCCCCEEHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEC NKVDLVLANFTVTEERKEKVDFAKPYMKVALGVVSPQNAPITDVGQLDGKTLIIAKGTTA CCEEEEEEEEEECHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHCCCCCEEEEECCCCH ETWFEKNAPNVKLQKYDQYADAYNALLDGRGDAFSTDNTEVLAWAKSNKGFKVGITHLGD HHHHHCCCCCCEEHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEECCCCEEEEEEECCC DDTIAPAVQKGNKELLDFVNDEIVKLGKDDFFHKDYQETLAPVYGDEVNPDEIVVEGGEV CCCHHHHHHCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCEEEEECCCC >Mature Secondary Structure SIKVGRSFKALIAAGAALVMAASMAACGPSAGTPSEAKSSDTGTSSGANAKARSLDEIK CEECCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHH KSGKIKIAVFSDKAPFGYVDKDGKYQGYDVYFAERLAKDLGVKPEYTSVDPAARVDVLTS HCCCEEEEEEECCCCCCCCCCCCCCCCEEHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEC NKVDLVLANFTVTEERKEKVDFAKPYMKVALGVVSPQNAPITDVGQLDGKTLIIAKGTTA CCEEEEEEEEEECHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHCCCCCEEEEECCCCH ETWFEKNAPNVKLQKYDQYADAYNALLDGRGDAFSTDNTEVLAWAKSNKGFKVGITHLGD HHHHHCCCCCCEEHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEECCCCEEEEEEECCC DDTIAPAVQKGNKELLDFVNDEIVKLGKDDFFHKDYQETLAPVYGDEVNPDEIVVEGGEV CCCHHHHHHCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 1856180 [H]