| Definition | Bifidobacterium longum subsp. infantis ATCC 15697, complete genome. |
|---|---|
| Accession | NC_011593 |
| Length | 2,832,748 |
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The map label for this gene is 213691610
Identifier: 213691610
GI number: 213691610
Start: 822033
End: 823118
Strand: Direct
Name: 213691610
Synonym: Blon_0714
Alternate gene names: NA
Gene position: 822033-823118 (Clockwise)
Preceding gene: 213691609
Following gene: 213691611
Centisome position: 29.02
GC content: 58.38
Gene sequence:
>1086_bases ATGGCCAAGGACGACGACAGAACCAACAAGCCTGAAGAGGCCGGCAAGTGGGGTACAGCCGGAAAATCCTCAGGAAAAAA CAACAAGAACGGCAAGGGAAAGGAATCCAAAACCGATCGACGGATCGACAAGGTATTACAGCTCGCGGCGGATAGCATAG ACACCATCGACTCCAGTGCCAGCGTGCCTGAACGACTGGCACGTGCGGCGAAATCCAGTGAACTGCTCAGCGCCGTATGG TCGTTGCCGCCTGCTCAACGTCTTATGTTCCACCACGGCATGCAGGTCACTGATGTCGAAGGCGATTCCACTCCCGGATT CGACGGCAATAAAGAGGACGCCGAGAAGTTCATTTCGATCAGCGCCTCCGAAATCGCCCGATACCAGCGGCTCATGTACG CGAATGGCGTCAAAGGCTCGACACGGCGGCTGCTCATCGTGCTGCAAGGCATGGATGCCTCCGGCAAGGGCGGCATTGTG CGTCACGTGTTCAGCCAAGGCGACCCGATGGGCATCCATTACCATGGCTTCGGCAAGCCTACGGCCGAGGAGCTCGACCA CGACTTCCTCTGGCGTGTGAAGCGTGAATTGCCCAAGCCGGGGTGGATTGCCGTATTCGACCGCTCCCATTATGAAGATG TGGTCATGCCGCACGTCTATGGCACCTATCCCGAAGACGTATGGCGTGCCCGCTACGACCAGATCAACGATTTCGAACGT GAACTGGCCGCCAGCGGATGCGCCATCCTCAAGATCTTCCTCGTGGTAAGCCAGGAAGAACAGAAAAAACACTTTCTTGG GAGGCTGGATGATCCCACCAAGTTCTGGAAATTCGATATCTCCGACCTCGAGGCCCGCGACCGATGGGATGAGTACATGT TCGCTTGGCAGGAAGTGTTCGAGAAAACCAGCACGGCCGCCGCACCGTGGTACCTCGTTCCGGCCGATAACCGCTGGTAT TCGCGAGCCGTGGTCTCCGAACTGCTGCGCACCACCTTGAAGAACATGAACATGACCTGGCCTCCCCTCGAACCCGAGGT GGACCCCGACGAGGTGCGCCGCCGGTTGGCGGGAGGCGCCGCATAG
Upstream 100 bases:
>100_bases GTCCGAACGACTGCATGCCTATAGATTTGCAGTAACAAGTGAAATGTGAATGTCGCTACGTTGCTAGGTCTCCTGAGTTA CAAGACGTACAATCGGGAGC
Downstream 100 bases:
>100_bases CGACGGAGGGTGGCTCGTGCCGCCGGAATAGGCCACTAGGTAGACTGAGCATTATGACTGACGAGAAGGAATACGGATCC CTGGGGCGGCTGGCCCCCGA
Product: hypothetical protein
Products: NA
Alternate protein names: URF2 [H]
Number of amino acids: Translated: 361; Mature: 360
Protein sequence:
>361_residues MAKDDDRTNKPEEAGKWGTAGKSSGKNNKNGKGKESKTDRRIDKVLQLAADSIDTIDSSASVPERLARAAKSSELLSAVW SLPPAQRLMFHHGMQVTDVEGDSTPGFDGNKEDAEKFISISASEIARYQRLMYANGVKGSTRRLLIVLQGMDASGKGGIV RHVFSQGDPMGIHYHGFGKPTAEELDHDFLWRVKRELPKPGWIAVFDRSHYEDVVMPHVYGTYPEDVWRARYDQINDFER ELAASGCAILKIFLVVSQEEQKKHFLGRLDDPTKFWKFDISDLEARDRWDEYMFAWQEVFEKTSTAAAPWYLVPADNRWY SRAVVSELLRTTLKNMNMTWPPLEPEVDPDEVRRRLAGGAA
Sequences:
>Translated_361_residues MAKDDDRTNKPEEAGKWGTAGKSSGKNNKNGKGKESKTDRRIDKVLQLAADSIDTIDSSASVPERLARAAKSSELLSAVW SLPPAQRLMFHHGMQVTDVEGDSTPGFDGNKEDAEKFISISASEIARYQRLMYANGVKGSTRRLLIVLQGMDASGKGGIV RHVFSQGDPMGIHYHGFGKPTAEELDHDFLWRVKRELPKPGWIAVFDRSHYEDVVMPHVYGTYPEDVWRARYDQINDFER ELAASGCAILKIFLVVSQEEQKKHFLGRLDDPTKFWKFDISDLEARDRWDEYMFAWQEVFEKTSTAAAPWYLVPADNRWY SRAVVSELLRTTLKNMNMTWPPLEPEVDPDEVRRRLAGGAA >Mature_360_residues AKDDDRTNKPEEAGKWGTAGKSSGKNNKNGKGKESKTDRRIDKVLQLAADSIDTIDSSASVPERLARAAKSSELLSAVWS LPPAQRLMFHHGMQVTDVEGDSTPGFDGNKEDAEKFISISASEIARYQRLMYANGVKGSTRRLLIVLQGMDASGKGGIVR HVFSQGDPMGIHYHGFGKPTAEELDHDFLWRVKRELPKPGWIAVFDRSHYEDVVMPHVYGTYPEDVWRARYDQINDFERE LAASGCAILKIFLVVSQEEQKKHFLGRLDDPTKFWKFDISDLEARDRWDEYMFAWQEVFEKTSTAAAPWYLVPADNRWYS RAVVSELLRTTLKNMNMTWPPLEPEVDPDEVRRRLAGGAA
Specific function: Unknown
COG id: COG2326
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011993 - InterPro: IPR022488 [H]
Pfam domain/function: PF03976 PPK2 [H]
EC number: NA
Molecular weight: Translated: 40911; Mature: 40780
Theoretical pI: Translated: 6.44; Mature: 6.44
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKDDDRTNKPEEAGKWGTAGKSSGKNNKNGKGKESKTDRRIDKVLQLAADSIDTIDSSA CCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCC SVPERLARAAKSSELLSAVWSLPPAQRLMFHHGMQVTDVEGDSTPGFDGNKEDAEKFISI CHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCEEEECCCCCCCCCCCCHHHHHHHHHC SASEIARYQRLMYANGVKGSTRRLLIVLQGMDASGKGGIVRHVFSQGDPMGIHYHGFGKP CHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCCCCHHHHHHHCCCCCEEEECCCCCC TAEELDHDFLWRVKRELPKPGWIAVFDRSHYEDVVMPHVYGTYPEDVWRARYDQINDFER CHHHHCHHHHHHHHHHCCCCCEEEEECCCCCCHHHCCCCCCCCHHHHHHHHHHHHHHHHH ELAASGCAILKIFLVVSQEEQKKHFLGRLDDPTKFWKFDISDLEARDRWDEYMFAWQEVF HHHHCCHHHHHHHHHHCCHHHHHHHHCCCCCCHHHEEECCHHHHHHHHHHHHHHHHHHHH EKTSTAAAPWYLVPADNRWYSRAVVSELLRTTLKNMNMTWPPLEPEVDPDEVRRRLAGGA HHHCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCCC A C >Mature Secondary Structure AKDDDRTNKPEEAGKWGTAGKSSGKNNKNGKGKESKTDRRIDKVLQLAADSIDTIDSSA CCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCC SVPERLARAAKSSELLSAVWSLPPAQRLMFHHGMQVTDVEGDSTPGFDGNKEDAEKFISI CHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCEEEECCCCCCCCCCCCHHHHHHHHHC SASEIARYQRLMYANGVKGSTRRLLIVLQGMDASGKGGIVRHVFSQGDPMGIHYHGFGKP CHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCCCCHHHHHHHCCCCCEEEECCCCCC TAEELDHDFLWRVKRELPKPGWIAVFDRSHYEDVVMPHVYGTYPEDVWRARYDQINDFER CHHHHCHHHHHHHHHHCCCCCEEEEECCCCCCHHHCCCCCCCCHHHHHHHHHHHHHHHHH ELAASGCAILKIFLVVSQEEQKKHFLGRLDDPTKFWKFDISDLEARDRWDEYMFAWQEVF HHHHCCHHHHHHHHHHCCHHHHHHHHCCCCCCHHHEEECCHHHHHHHHHHHHHHHHHHHH EKTSTAAAPWYLVPADNRWYSRAVVSELLRTTLKNMNMTWPPLEPEVDPDEVRRRLAGGA HHHCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCCC A C
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8199775 [H]