| Definition | Bifidobacterium longum subsp. infantis ATCC 15697, complete genome. |
|---|---|
| Accession | NC_011593 |
| Length | 2,832,748 |
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The map label for this gene is 213691609
Identifier: 213691609
GI number: 213691609
Start: 820277
End: 821809
Strand: Direct
Name: 213691609
Synonym: Blon_0713
Alternate gene names: NA
Gene position: 820277-821809 (Clockwise)
Preceding gene: 213691608
Following gene: 213691610
Centisome position: 28.96
GC content: 62.43
Gene sequence:
>1533_bases ATGAAGATGTTCCGGCGCCTATCCTCCGTTTTTGCTATTGCGACCATTGCGCCGCTGGCGTTGGCGGCCACGCTAGCCGC GACGCCCGCAATCGCACAGGCCGACCAGTTGCCCAACCCGGATTGGGTGGCATTGCTCTCCGACTACGAAAAGAACTATT GGCAGGCCCCCACCGATGCCGAACACGGTGGCAAGGTGCTCCACGCCGATACCATGAAGCTCGACGAAGATTTGGCCGTG GCCATTAACCACAAAGCCGCCGAAAATCTCGATAAGGATGGCCTGAACGTCCAACGCAAGCGTGCACTCGTCGACTCCGA TCTGCAAGCCGAGGAAACCATGCCGGACGCGCTCGGTCCAGTGCTTGGCAAATATATGAGCGAAGGGCTCAAATCCGGGA AACTCAACGCCGTCGCCGATATCTTCTCCTTTAACGTGGCCTCCACCTACGCCTCAAAACGTGCGGCCATGCATCCGCGC CCCTATCTGAACCGTGCGGAAAGCAGCTACGGCGGCACTAACGATCTCGCCGGACTGCCCGCCACGCTCGATATCAAACA ATCGCCCTCATGGCTCGAACACATGCCCGGCTACTCGAACTTGCAGAAAAACAGTTCCTACCCCTCCGGCCACACTACCG GCGCCTATTCGTGGGGTATCGCGCTGGCCGGAATGATTCCCGAACTTGCGCCGCAAATCATGGCCCGCACTTCGGAGGCC GGCAACAACCGCATCGTGCTCGGCGTGCATTATCCGCTTGACATCATGGGCGGGCGCATTGGCGCATCCGCCCAGAACGG GCAGTACTGGCATAACGAATTCGCTTCGTCCATCGTGCCCGCGTCCCGGCAGCTGCGCGACTATCTGGTGTCCCGCTGTG CCGCGGACGGCCACGGCACTACCCTCGCCGCCTGCATCGCCAACACCAAGGCCTCCGGTTCGGGCGGCTACACCAACGAT TTTCTGGACCCAGTGGCCACCGAGCCGGTCGTGGACCAAGCCTCGGCCGTGCGCGTCTACACCGCACGCCTGACCTACAC CTTCCCGCAAGACGCCGCCCATTCCGGCGCTGATCTCGTGGCCCCGCGCGGGGCGGCGGACGTGCTGCGACTGGCCTATC CCGAACTGCACGCCGATCAGCGCAACGCGATTTTGAAAGCCACTGCCTTGGATTCCGGATACCCCCTATGGCAATCGAGC GACGGCTGGCAGCGTATCAACTGGGCCAAAGCCCTGTGCGCCCGCGTCACCTTGGATAAGCACGGCGATGTGGCCAAGGT CGAGACCGCCGACCAGGTGGCGCTTACCGGCCCGAGTGTGGTCAATGCCCAGTACGCCGACGCGGGCAATCACCCGGCGT CTGATAGCTCGGCGGGTGAGAACAGCGCCATTGCGGCCGGGCCGGATCTCGCCACCCTCCATGCCGCGCAACGACCGGCG TTGATCAGCGTAGCCATCGGTACCGCTGTAATCGCGATTGTCGGCGGAATACGGACGGTTCGACGCAAATCCAAGAACCA GCTTCAGCAGTAA
Upstream 100 bases:
>100_bases TGACGGTCAGCCCAATCGCCGCTAAGCCGGCACGAAGAATTTACTGAGTGTTTGACTGGGGTCCGGCTACGTAGATTTCA CGGAGGATAGGTTGGAACAT
Downstream 100 bases:
>100_bases TTCAGCCAAAGTTCAGTTTGGAGATTTACCGAGTTTGCCTTCATACGGTGTCGGCTTCATCTCCCTCCCATACCCTCGGG ATTGCCGACGGTGCCAGGTA
Product: hypothetical protein
Products: NA
Alternate protein names: Phosphoesterase PA-Phosphatase ; Autotransporter; Phosphoesterase PA-Phosphatase Related Protein; Beta Strand Repeat-Containing Protein; Outer Membrane Autotransporter Barrel; Phosphoesterase; Serine Protease; Membrane-Associated Phospholipid Phosphatase; Acid Phosphatase; Secreted Protein; Phosphatase Protein; Autotransporter-Associated Beta Strand Repeat Protein; Phosphatase Domain-Containing Protein; Outer Membrane Autotransporter; LPXTG-Motif Cell Wall Anchor Domain Protein; PAP2 Superfamily Protein; Non-Specific Acid Phosphatase; Phosphoesterase PA-Phosphatase-Like Protein; PAP2 Family Protein; Outer Membrane Autotransporter Domain-Containing Protein; Lipoprotein
Number of amino acids: Translated: 510; Mature: 510
Protein sequence:
>510_residues MKMFRRLSSVFAIATIAPLALAATLAATPAIAQADQLPNPDWVALLSDYEKNYWQAPTDAEHGGKVLHADTMKLDEDLAV AINHKAAENLDKDGLNVQRKRALVDSDLQAEETMPDALGPVLGKYMSEGLKSGKLNAVADIFSFNVASTYASKRAAMHPR PYLNRAESSYGGTNDLAGLPATLDIKQSPSWLEHMPGYSNLQKNSSYPSGHTTGAYSWGIALAGMIPELAPQIMARTSEA GNNRIVLGVHYPLDIMGGRIGASAQNGQYWHNEFASSIVPASRQLRDYLVSRCAADGHGTTLAACIANTKASGSGGYTND FLDPVATEPVVDQASAVRVYTARLTYTFPQDAAHSGADLVAPRGAADVLRLAYPELHADQRNAILKATALDSGYPLWQSS DGWQRINWAKALCARVTLDKHGDVAKVETADQVALTGPSVVNAQYADAGNHPASDSSAGENSAIAAGPDLATLHAAQRPA LISVAIGTAVIAIVGGIRTVRRKSKNQLQQ
Sequences:
>Translated_510_residues MKMFRRLSSVFAIATIAPLALAATLAATPAIAQADQLPNPDWVALLSDYEKNYWQAPTDAEHGGKVLHADTMKLDEDLAV AINHKAAENLDKDGLNVQRKRALVDSDLQAEETMPDALGPVLGKYMSEGLKSGKLNAVADIFSFNVASTYASKRAAMHPR PYLNRAESSYGGTNDLAGLPATLDIKQSPSWLEHMPGYSNLQKNSSYPSGHTTGAYSWGIALAGMIPELAPQIMARTSEA GNNRIVLGVHYPLDIMGGRIGASAQNGQYWHNEFASSIVPASRQLRDYLVSRCAADGHGTTLAACIANTKASGSGGYTND FLDPVATEPVVDQASAVRVYTARLTYTFPQDAAHSGADLVAPRGAADVLRLAYPELHADQRNAILKATALDSGYPLWQSS DGWQRINWAKALCARVTLDKHGDVAKVETADQVALTGPSVVNAQYADAGNHPASDSSAGENSAIAAGPDLATLHAAQRPA LISVAIGTAVIAIVGGIRTVRRKSKNQLQQ >Mature_510_residues MKMFRRLSSVFAIATIAPLALAATLAATPAIAQADQLPNPDWVALLSDYEKNYWQAPTDAEHGGKVLHADTMKLDEDLAV AINHKAAENLDKDGLNVQRKRALVDSDLQAEETMPDALGPVLGKYMSEGLKSGKLNAVADIFSFNVASTYASKRAAMHPR PYLNRAESSYGGTNDLAGLPATLDIKQSPSWLEHMPGYSNLQKNSSYPSGHTTGAYSWGIALAGMIPELAPQIMARTSEA GNNRIVLGVHYPLDIMGGRIGASAQNGQYWHNEFASSIVPASRQLRDYLVSRCAADGHGTTLAACIANTKASGSGGYTND FLDPVATEPVVDQASAVRVYTARLTYTFPQDAAHSGADLVAPRGAADVLRLAYPELHADQRNAILKATALDSGYPLWQSS DGWQRINWAKALCARVTLDKHGDVAKVETADQVALTGPSVVNAQYADAGNHPASDSSAGENSAIAAGPDLATLHAAQRPA LISVAIGTAVIAIVGGIRTVRRKSKNQLQQ
Specific function: Unknown
COG id: COG0671
COG function: function code I; Membrane-associated phospholipid phosphatase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 54146; Mature: 54146
Theoretical pI: Translated: 6.76; Mature: 6.76
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKMFRRLSSVFAIATIAPLALAATLAATPAIAQADQLPNPDWVALLSDYEKNYWQAPTDA CHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCC EHGGKVLHADTMKLDEDLAVAINHKAAENLDKDGLNVQRKRALVDSDLQAEETMPDALGP CCCCEEEEECCCCCCCCCEEEECCHHHHCCCCCCCCHHHHHHHHCCCCCHHHCCHHHHHH VLGKYMSEGLKSGKLNAVADIFSFNVASTYASKRAAMHPRPYLNRAESSYGGTNDLAGLP HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCCCCCCCC ATLDIKQSPSWLEHMPGYSNLQKNSSYPSGHTTGAYSWGIALAGMIPELAPQIMARTSEA CEEECCCCCHHHHHCCCCCHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCC GNNRIVLGVHYPLDIMGGRIGASAQNGQYWHNEFASSIVPASRQLRDYLVSRCAADGHGT CCCEEEEEEECCHHHCCCCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCC TLAACIANTKASGSGGYTNDFLDPVATEPVVDQASAVRVYTARLTYTFPQDAAHSGADLV CHHHHHHCCCCCCCCCCCHHCCCCCCCCCHHCCCCEEEEEEEEEEEECCCHHCCCCCCCC APRGAADVLRLAYPELHADQRNAILKATALDSGYPLWQSSDGWQRINWAKALCARVTLDK CCCCHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHCC HGDVAKVETADQVALTGPSVVNAQYADAGNHPASDSSAGENSAIAAGPDLATLHAAQRPA CCCEEEECCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCHHHHHHCCCCC LISVAIGTAVIAIVGGIRTVRRKSKNQLQQ EEEHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MKMFRRLSSVFAIATIAPLALAATLAATPAIAQADQLPNPDWVALLSDYEKNYWQAPTDA CHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCC EHGGKVLHADTMKLDEDLAVAINHKAAENLDKDGLNVQRKRALVDSDLQAEETMPDALGP CCCCEEEEECCCCCCCCCEEEECCHHHHCCCCCCCCHHHHHHHHCCCCCHHHCCHHHHHH VLGKYMSEGLKSGKLNAVADIFSFNVASTYASKRAAMHPRPYLNRAESSYGGTNDLAGLP HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCCCCCCCC ATLDIKQSPSWLEHMPGYSNLQKNSSYPSGHTTGAYSWGIALAGMIPELAPQIMARTSEA CEEECCCCCHHHHHCCCCCHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCC GNNRIVLGVHYPLDIMGGRIGASAQNGQYWHNEFASSIVPASRQLRDYLVSRCAADGHGT CCCEEEEEEECCHHHCCCCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCC TLAACIANTKASGSGGYTNDFLDPVATEPVVDQASAVRVYTARLTYTFPQDAAHSGADLV CHHHHHHCCCCCCCCCCCHHCCCCCCCCCHHCCCCEEEEEEEEEEEECCCHHCCCCCCCC APRGAADVLRLAYPELHADQRNAILKATALDSGYPLWQSSDGWQRINWAKALCARVTLDK CCCCHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHCC HGDVAKVETADQVALTGPSVVNAQYADAGNHPASDSSAGENSAIAAGPDLATLHAAQRPA CCCEEEECCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCHHHHHHCCCCC LISVAIGTAVIAIVGGIRTVRRKSKNQLQQ EEEHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA