Definition Bifidobacterium longum subsp. infantis ATCC 15697, complete genome.
Accession NC_011593
Length 2,832,748

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The map label for this gene is 213691571

Identifier: 213691571

GI number: 213691571

Start: 777201

End: 777848

Strand: Direct

Name: 213691571

Synonym: Blon_0674

Alternate gene names: NA

Gene position: 777201-777848 (Clockwise)

Preceding gene: 213691570

Following gene: 213691572

Centisome position: 27.44

GC content: 70.22

Gene sequence:

>648_bases
ATGGACGTGCCCGTCATGGAATGCTTCGACGAGGACCGGAAGGCGTTGACGCCCCTGCCGTCCACGCGTTTCGACCCGAT
CCGGTGGGAAAGCGGGAAGGCAGGCAAATACGGTCGCATCGGCATCGACCCCAACCGGTACCTCGCCGGCGGCGAGTGGC
ATGGCAGGCGACTCCCGGCCGCGGTCAGGCGGGACAGCGTGCGGATCGCCGACCCCAAGTCGGGCGAAGTGGTCGCCGAA
TACCCCAGGCAGTACGGCAGGACTGCCGGCACGCTGCAGGATCCCGCGCTGGTGATGCCGATGCTCGCCGCCCGCCCGGG
CTCATGGAGGGAGACGCCGATACGCCCGGATTTCCCCGAGGACGTGCGCGAATGGCTCGACCAGGCCGGCAGGCAACGGT
TGCGCGACAGTCTCAGGGCCATCGCCCAGGCCGCGGAAGCGGCGGGCTTCGACAACGCCATGCTCGCCGCGTCCGACTCG
ATCGGGTTGCGGCCCGATGCCAGGCCCGCGGACACGGACCTGGTGTCGCTCGCCCTGCGCCACCGGGACGGCGACTGGGA
CGAGGCAAGCGACCAGGGTCCTGACCTGACCGGCCACGACCGGTTCATCACCGGGACCGGGCCGGAAGGCAAGGAGGAGA
CGCGATGA

Upstream 100 bases:

>100_bases
TCATGGTCCCGCCCCTGGAGGCCGAGTCCCACGGGCAACCCGCCCGCGTCATGCTCGGACGCCGCGACGAACCGGCCCGG
AGCCGATCCATTACAAGCTG

Downstream 100 bases:

>100_bases
GCAGGAGACCTGATCCCAGGATCCCCGAGACCAGGCGCCGCCGGGCCGGCACCATCGCCAAAAGCGAACGCGTCATGGCC
ATGAGCCGGCACCTGACCCT

Product: transposase

Products: NA

Alternate protein names: IS21 Family Transposase

Number of amino acids: Translated: 215; Mature: 215

Protein sequence:

>215_residues
MDVPVMECFDEDRKALTPLPSTRFDPIRWESGKAGKYGRIGIDPNRYLAGGEWHGRRLPAAVRRDSVRIADPKSGEVVAE
YPRQYGRTAGTLQDPALVMPMLAARPGSWRETPIRPDFPEDVREWLDQAGRQRLRDSLRAIAQAAEAAGFDNAMLAASDS
IGLRPDARPADTDLVSLALRHRDGDWDEASDQGPDLTGHDRFITGTGPEGKEETR

Sequences:

>Translated_215_residues
MDVPVMECFDEDRKALTPLPSTRFDPIRWESGKAGKYGRIGIDPNRYLAGGEWHGRRLPAAVRRDSVRIADPKSGEVVAE
YPRQYGRTAGTLQDPALVMPMLAARPGSWRETPIRPDFPEDVREWLDQAGRQRLRDSLRAIAQAAEAAGFDNAMLAASDS
IGLRPDARPADTDLVSLALRHRDGDWDEASDQGPDLTGHDRFITGTGPEGKEETR
>Mature_215_residues
MDVPVMECFDEDRKALTPLPSTRFDPIRWESGKAGKYGRIGIDPNRYLAGGEWHGRRLPAAVRRDSVRIADPKSGEVVAE
YPRQYGRTAGTLQDPALVMPMLAARPGSWRETPIRPDFPEDVREWLDQAGRQRLRDSLRAIAQAAEAAGFDNAMLAASDS
IGLRPDARPADTDLVSLALRHRDGDWDEASDQGPDLTGHDRFITGTGPEGKEETR

Specific function: Unknown

COG id: COG4584

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23818; Mature: 23818

Theoretical pI: Translated: 5.03; Mature: 5.03

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDVPVMECFDEDRKALTPLPSTRFDPIRWESGKAGKYGRIGIDPNRYLAGGEWHGRRLPA
CCCCHHHHHHHHHHHCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCEEECCCCCCCCCCH
AVRRDSVRIADPKSGEVVAEYPRQYGRTAGTLQDPALVMPMLAARPGSWRETPIRPDFPE
HHHHCCEEECCCCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCHH
DVREWLDQAGRQRLRDSLRAIAQAAEAAGFDNAMLAASDSIGLRPDARPADTDLVSLALR
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHH
HRDGDWDEASDQGPDLTGHDRFITGTGPEGKEETR
HCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCC
>Mature Secondary Structure
MDVPVMECFDEDRKALTPLPSTRFDPIRWESGKAGKYGRIGIDPNRYLAGGEWHGRRLPA
CCCCHHHHHHHHHHHCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCEEECCCCCCCCCCH
AVRRDSVRIADPKSGEVVAEYPRQYGRTAGTLQDPALVMPMLAARPGSWRETPIRPDFPE
HHHHCCEEECCCCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCHH
DVREWLDQAGRQRLRDSLRAIAQAAEAAGFDNAMLAASDSIGLRPDARPADTDLVSLALR
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHH
HRDGDWDEASDQGPDLTGHDRFITGTGPEGKEETR
HCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA