| Definition | Bifidobacterium longum subsp. infantis ATCC 15697, complete genome. |
|---|---|
| Accession | NC_011593 |
| Length | 2,832,748 |
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The map label for this gene is 213691515
Identifier: 213691515
GI number: 213691515
Start: 703146
End: 703733
Strand: Direct
Name: 213691515
Synonym: Blon_0615
Alternate gene names: NA
Gene position: 703146-703733 (Clockwise)
Preceding gene: 213691514
Following gene: 213691516
Centisome position: 24.82
GC content: 63.61
Gene sequence:
>588_bases ATGCGTGTCAGGGAATGGGCGAGGCGTGAGGGCTTCAACGAGCAGACGGTGTGGCAGTGGTGTCGCGAGAACCGTATGCC CGTCCCGTTCGAGCGCATGAACACGGGCACGATTATCATCCACGACCCGAAATACGAGAACCAGCCCGCCGCCCCCACAG CGAACGGCAGGACGGTGTGTTACGCGCGTGTCAGCTCGTCCGACCAAAAGGACGATTTGCAACGTCAGGCCGACCGGTTG AAGGCGTTCGCCATCAACATGGGCGTCAAGAGCCCCGAGGTGGTCATGGAGACCGGTTCGGGCATGAACGACAAACGGCG CAAGCTCAACCGGCTATTGGCCGACCCGACCGTGGGCACGCTGATCGTGGAGCGCAGGGACAGGCTCGCCCGCATGAACG CGGGACTGGTGGAGAGCGCGTTGAAGGCGCAGGGACGCCGAATCATCGTGGTGGACGACACGGAGCTGGACGACGACTTG GTGCGCGACATGACCGAGGTGCTGACCTCGTTCTGCGCACGACTGTACGGGCGTCGTGCCGCCAAGCATAAGACGGATGC GGCGTTGAGGGCGGCGCGTGATGCTTGA
Upstream 100 bases:
>100_bases TCGGCCTCTGTGAGGGGAGCTGTCGCGCAGCGACTGAGGGGTTATAGCCTGCTAGATTGATTATCTGCTTTAGTTTGTTT TCGTGTGATATAATTAAGTC
Downstream 100 bases:
>100_bases GGCGGTCAAGGTGGCGCTCGACCCGACGCCACGGCAGGAACGACTCTTGGAGTCCCATGCCGGTGCGGCGCGGTTCGCGT ACAACGCGGGACTGGCGCAC
Product: Resolvase, N-terminal domain protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 195; Mature: 195
Protein sequence:
>195_residues MRVREWARREGFNEQTVWQWCRENRMPVPFERMNTGTIIIHDPKYENQPAAPTANGRTVCYARVSSSDQKDDLQRQADRL KAFAINMGVKSPEVVMETGSGMNDKRRKLNRLLADPTVGTLIVERRDRLARMNAGLVESALKAQGRRIIVVDDTELDDDL VRDMTEVLTSFCARLYGRRAAKHKTDAALRAARDA
Sequences:
>Translated_195_residues MRVREWARREGFNEQTVWQWCRENRMPVPFERMNTGTIIIHDPKYENQPAAPTANGRTVCYARVSSSDQKDDLQRQADRL KAFAINMGVKSPEVVMETGSGMNDKRRKLNRLLADPTVGTLIVERRDRLARMNAGLVESALKAQGRRIIVVDDTELDDDL VRDMTEVLTSFCARLYGRRAAKHKTDAALRAARDA >Mature_195_residues MRVREWARREGFNEQTVWQWCRENRMPVPFERMNTGTIIIHDPKYENQPAAPTANGRTVCYARVSSSDQKDDLQRQADRL KAFAINMGVKSPEVVMETGSGMNDKRRKLNRLLADPTVGTLIVERRDRLARMNAGLVESALKAQGRRIIVVDDTELDDDL VRDMTEVLTSFCARLYGRRAAKHKTDAALRAARDA
Specific function: Unknown
COG id: COG2452
COG function: function code L; Predicted site-specific integrase-resolvase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006119 [H]
Pfam domain/function: PF00239 Resolvase [H]
EC number: NA
Molecular weight: Translated: 22247; Mature: 22247
Theoretical pI: Translated: 10.10; Mature: 10.10
Prosite motif: PS00397 RECOMBINASES_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 4.1 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRVREWARREGFNEQTVWQWCRENRMPVPFERMNTGTIIIHDPKYENQPAAPTANGRTVC CCCHHHHHHCCCCHHHHHHHHHCCCCCCCHHHCCCCEEEEECCCCCCCCCCCCCCCCEEE YARVSSSDQKDDLQRQADRLKAFAINMGVKSPEVVMETGSGMNDKRRKLNRLLADPTVGT EEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHEECCCCCCHHHHHHHHHHCCCCHHH LIVERRDRLARMNAGLVESALKAQGRRIIVVDDTELDDDLVRDMTEVLTSFCARLYGRRA HHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHH AKHKTDAALRAARDA HHHHHHHHHHHHCCC >Mature Secondary Structure MRVREWARREGFNEQTVWQWCRENRMPVPFERMNTGTIIIHDPKYENQPAAPTANGRTVC CCCHHHHHHCCCCHHHHHHHHHCCCCCCCHHHCCCCEEEEECCCCCCCCCCCCCCCCEEE YARVSSSDQKDDLQRQADRLKAFAINMGVKSPEVVMETGSGMNDKRRKLNRLLADPTVGT EEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHEECCCCCCHHHHHHHHHHCCCCHHH LIVERRDRLARMNAGLVESALKAQGRRIIVVDDTELDDDLVRDMTEVLTSFCARLYGRRA HHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHH AKHKTDAALRAARDA HHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]