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The map label for this gene is xseB [H]

Identifier: 213691510

GI number: 213691510

Start: 692108

End: 692410

Strand: Reverse

Name: xseB [H]

Synonym: Blon_0610

Alternate gene names: 213691510

Gene position: 692410-692108 (Counterclockwise)

Preceding gene: 213691511

Following gene: 213691508

Centisome position: 24.44

GC content: 62.71

Gene sequence:

>303_bases
ATGACCGAAAACGCCGCATCCACCGACAAGAACAACCCCGCCTCGTCCCTGGCGGACAAGGAACGCGAGCTCATCGCCCA
GATGCCATATGAAGAGGCGCGCGACAAGCTGATTCAGGCTGTCCAGGCACTGGAAACCGGCGGCCTCAATCTTGACCAGT
CGATGCGTCAATGGGAAATCGGCGAGGCCTTGGCCAAGCGCGCCCAGGGTCTGCTCAACGACGTCCGCGCCAAGCTCGAC
CAGGCACAAGCCGAGCAAGCCGCCAACGAAGCCACCGCAGGCACGCAGTCCAACCTCGACTGA

Upstream 100 bases:

>100_bases
CTTGAAGAAGGGTGTCATTACCGCAACCACCACATCCGCAACCGCGTGACACTCCATACGCAGCCACGCATATATACCAT
ATATATATAAGGAGAACATC

Downstream 100 bases:

>100_bases
GTTGCCTCCCGGCGCGGCATCATCGTGCAAGCTTGCGGATGATGCCGATGCGCTCCTGCATGGCGGAGCAGATGGCGTCA
ATCACATCAGCGGACAGCCG

Product: Exonuclease VII, small subunit

Products: NA

Alternate protein names: Exodeoxyribonuclease VII small subunit; Exonuclease VII small subunit [H]

Number of amino acids: Translated: 100; Mature: 99

Protein sequence:

>100_residues
MTENAASTDKNNPASSLADKERELIAQMPYEEARDKLIQAVQALETGGLNLDQSMRQWEIGEALAKRAQGLLNDVRAKLD
QAQAEQAANEATAGTQSNLD

Sequences:

>Translated_100_residues
MTENAASTDKNNPASSLADKERELIAQMPYEEARDKLIQAVQALETGGLNLDQSMRQWEIGEALAKRAQGLLNDVRAKLD
QAQAEQAANEATAGTQSNLD
>Mature_99_residues
TENAASTDKNNPASSLADKERELIAQMPYEEARDKLIQAVQALETGGLNLDQSMRQWEIGEALAKRAQGLLNDVRAKLDQ
AQAEQAANEATAGTQSNLD

Specific function: Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides [H]

COG id: COG1722

COG function: function code L; Exonuclease VII small subunit

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the xseB family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003761
- ProDom:   PD028235 [H]

Pfam domain/function: PF02609 Exonuc_VII_S [H]

EC number: =3.1.11.6 [H]

Molecular weight: Translated: 10842; Mature: 10711

Theoretical pI: Translated: 4.20; Mature: 4.20

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTENAASTDKNNPASSLADKERELIAQMPYEEARDKLIQAVQALETGGLNLDQSMRQWEI
CCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
GEALAKRAQGLLNDVRAKLDQAQAEQAANEATAGTQSNLD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure 
TENAASTDKNNPASSLADKERELIAQMPYEEARDKLIQAVQALETGGLNLDQSMRQWEI
CCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
GEALAKRAQGLLNDVRAKLDQAQAEQAANEATAGTQSNLD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA