| Definition | Bifidobacterium longum subsp. infantis ATCC 15697, complete genome. |
|---|---|
| Accession | NC_011593 |
| Length | 2,832,748 |
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The map label for this gene is 213691509
Identifier: 213691509
GI number: 213691509
Start: 690916
End: 692088
Strand: Direct
Name: 213691509
Synonym: Blon_0609
Alternate gene names: NA
Gene position: 690916-692088 (Clockwise)
Preceding gene: 213691507
Following gene: 213691512
Centisome position: 24.39
GC content: 58.57
Gene sequence:
>1173_bases ATGACCATGAACCGCATGCTGATGTGCCGTACCCATCCGGTAATGGAGTTCGAGTATTTCGAACGCGGCGGATACGCCCT GAGGGCAGGGGAGATCTACGACGAGTCCCGAATCCCGATCGGCATGTATGTGGACGGCAAACCTGAGCCCACCGGTGAGT CGATTACCGGGTGGTGGCGTTCTCGCGGCATTCCCATGACCCGTGACGGTATGCGTTCCGTATTTGCCGGTTCGGGTATC GCTTCGACGAACGATCTGCTGGACCGTTCCTTGGGACTCAGCCTGTCGGACCAGTATTGGGTGCGGCCTCTCGACCGGCC CGATCTGACGTGGGAAAAACTGAACTTTTTCCACAACGATTTTGACGAACGACTTGGGCAGGCCTTATTCTTCGGTAATT CGTCGCGCATCGGCAACGTGAACACCCCGGATGTCACCAGTGCCGGTGACCTGCCGAAACGTTGGATTATCGGTCCCGAT GGCGTCCGCAGCCTGATCAAGGGAGGGCGCACCGGTCAGGAGCCGGACAACGAGCGCATCGCCTGGCAGACGGCACGACT GTTCGGCATCGACCATGTCGAATACCGCATCGGCCGCGCCAAGGGCATCCGGGTCTCCGTCTGCGATGAAATGCTCGAAG ACACGCAAGAGCTGATTCCCGCAGGGCAGGTTATGCGCATCTTCCGACGCGGCGACAACACCGAACGCAAGATGATATGG CTGGACGCATGTCAGCAACTCGGCGTAAGTCGTGATATGGCAAATGCGGCGACCAACGATTTTCTGTTCCTTGATTTTCT TCTGCGCAACACCGACCGGCATTACAACAACTTCGGTCTCATCCGTGACGTCGAATCATTCGAGATTCGCCCGTCCCCGA TTTTTGACAGCGGCGCCAGCCTGTGGAACGGCATGGACCCCGAAGCCATCACCAACGAAGACTACCCGGCGAAGCCGTTC TGGCTCGACGACTACGGCGATGCGGACAACGCCTACTGGCAGTTGGGACTTATCGACGATTGGGACCGTTATGATTTGGG GATGCTCGACGAGGTGCCTGAACTGATACGGGCACAGCTCGCCACCAACCGCCGGCTGTCCGCTGATGTGATTGACGCCA TCTGCTCCGCCATGCAGGAGCGCATCGGCATCATCCGCAAGCTTGCACGATGA
Upstream 100 bases:
>100_bases TGGCGCTGAAGCTTCAGTGGGCCGCATATACGAGTCCTAAAGCGGATAGGATGGGATATGACGCGGATATCGTCGGTGGA CTGAATAACGGGAGGCGCAC
Downstream 100 bases:
>100_bases TGCCGCGCCGGGAGGCAACTCAGTCGAGGTTGGACTGCGTGCCTGCGGTGGCTTCGTTGGCGGCTTGCTCGGCTTGTGCC TGGTCGAGCTTGGCGCGGAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 390; Mature: 389
Protein sequence:
>390_residues MTMNRMLMCRTHPVMEFEYFERGGYALRAGEIYDESRIPIGMYVDGKPEPTGESITGWWRSRGIPMTRDGMRSVFAGSGI ASTNDLLDRSLGLSLSDQYWVRPLDRPDLTWEKLNFFHNDFDERLGQALFFGNSSRIGNVNTPDVTSAGDLPKRWIIGPD GVRSLIKGGRTGQEPDNERIAWQTARLFGIDHVEYRIGRAKGIRVSVCDEMLEDTQELIPAGQVMRIFRRGDNTERKMIW LDACQQLGVSRDMANAATNDFLFLDFLLRNTDRHYNNFGLIRDVESFEIRPSPIFDSGASLWNGMDPEAITNEDYPAKPF WLDDYGDADNAYWQLGLIDDWDRYDLGMLDEVPELIRAQLATNRRLSADVIDAICSAMQERIGIIRKLAR
Sequences:
>Translated_390_residues MTMNRMLMCRTHPVMEFEYFERGGYALRAGEIYDESRIPIGMYVDGKPEPTGESITGWWRSRGIPMTRDGMRSVFAGSGI ASTNDLLDRSLGLSLSDQYWVRPLDRPDLTWEKLNFFHNDFDERLGQALFFGNSSRIGNVNTPDVTSAGDLPKRWIIGPD GVRSLIKGGRTGQEPDNERIAWQTARLFGIDHVEYRIGRAKGIRVSVCDEMLEDTQELIPAGQVMRIFRRGDNTERKMIW LDACQQLGVSRDMANAATNDFLFLDFLLRNTDRHYNNFGLIRDVESFEIRPSPIFDSGASLWNGMDPEAITNEDYPAKPF WLDDYGDADNAYWQLGLIDDWDRYDLGMLDEVPELIRAQLATNRRLSADVIDAICSAMQERIGIIRKLAR >Mature_389_residues TMNRMLMCRTHPVMEFEYFERGGYALRAGEIYDESRIPIGMYVDGKPEPTGESITGWWRSRGIPMTRDGMRSVFAGSGIA STNDLLDRSLGLSLSDQYWVRPLDRPDLTWEKLNFFHNDFDERLGQALFFGNSSRIGNVNTPDVTSAGDLPKRWIIGPDG VRSLIKGGRTGQEPDNERIAWQTARLFGIDHVEYRIGRAKGIRVSVCDEMLEDTQELIPAGQVMRIFRRGDNTERKMIWL DACQQLGVSRDMANAATNDFLFLDFLLRNTDRHYNNFGLIRDVESFEIRPSPIFDSGASLWNGMDPEAITNEDYPAKPFW LDDYGDADNAYWQLGLIDDWDRYDLGMLDEVPELIRAQLATNRRLSADVIDAICSAMQERIGIIRKLAR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 44575; Mature: 44444
Theoretical pI: Translated: 4.64; Mature: 4.64
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTMNRMLMCRTHPVMEFEYFERGGYALRAGEIYDESRIPIGMYVDGKPEPTGESITGWWR CCCCCEEEEECCCCEEHHHHHCCCEEEEECCEECCCCCCEEEEECCCCCCCCCCHHHHHH SRGIPMTRDGMRSVFAGSGIASTNDLLDRSLGLSLSDQYWVRPLDRPDLTWEKLNFFHND HCCCCCCHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCHHCCCCCCCCCCHHHHHHHHHH FDERLGQALFFGNSSRIGNVNTPDVTSAGDLPKRWIIGPDGVRSLIKGGRTGQEPDNERI HHHHHHHEEEECCCCCCCCCCCCCCCCCCCCCCCEEECCHHHHHHHHCCCCCCCCCCCCE AWQTARLFGIDHVEYRIGRAKGIRVSVCDEMLEDTQELIPAGQVMRIFRRGDNTERKMIW EEEHHHHHCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCEEEH LDACQQLGVSRDMANAATNDFLFLDFLLRNTDRHYNNFGLIRDVESFEIRPSPIFDSGAS HHHHHHCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCEEEHHHCCCCCCCCCCCCHH LWNGMDPEAITNEDYPAKPFWLDDYGDADNAYWQLGLIDDWDRYDLGMLDEVPELIRAQL HHCCCCCCCCCCCCCCCCCEECCCCCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHH ATNRRLSADVIDAICSAMQERIGIIRKLAR HCCCCCCHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure TMNRMLMCRTHPVMEFEYFERGGYALRAGEIYDESRIPIGMYVDGKPEPTGESITGWWR CCCCEEEEECCCCEEHHHHHCCCEEEEECCEECCCCCCEEEEECCCCCCCCCCHHHHHH SRGIPMTRDGMRSVFAGSGIASTNDLLDRSLGLSLSDQYWVRPLDRPDLTWEKLNFFHND HCCCCCCHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCHHCCCCCCCCCCHHHHHHHHHH FDERLGQALFFGNSSRIGNVNTPDVTSAGDLPKRWIIGPDGVRSLIKGGRTGQEPDNERI HHHHHHHEEEECCCCCCCCCCCCCCCCCCCCCCCEEECCHHHHHHHHCCCCCCCCCCCCE AWQTARLFGIDHVEYRIGRAKGIRVSVCDEMLEDTQELIPAGQVMRIFRRGDNTERKMIW EEEHHHHHCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCEEEH LDACQQLGVSRDMANAATNDFLFLDFLLRNTDRHYNNFGLIRDVESFEIRPSPIFDSGAS HHHHHHCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCEEEHHHCCCCCCCCCCCCHH LWNGMDPEAITNEDYPAKPFWLDDYGDADNAYWQLGLIDDWDRYDLGMLDEVPELIRAQL HHCCCCCCCCCCCCCCCCCEECCCCCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHH ATNRRLSADVIDAICSAMQERIGIIRKLAR HCCCCCCHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA