Click here to switch to the map view.

The map label for this gene is ssb [H]

Identifier: 213691492

GI number: 213691492

Start: 667246

End: 667989

Strand: Direct

Name: ssb [H]

Synonym: Blon_0590

Alternate gene names: 213691492

Gene position: 667246-667989 (Clockwise)

Preceding gene: 213691491

Following gene: 213691494

Centisome position: 23.55

GC content: 59.95

Gene sequence:

>744_bases
ATGGCAAATCAACAAGCAGCAGTGACCGTCACCGGCTTTGTGGCCGGTGATCCGACACTAGGCGGAACTGAGAGTTTCCG
CGTGTTGACATTCCGTATGGGCAGCACGCGCAGTCGACTCAACCCGACTACCAGACAATGGGAGGATTACGGAACCGCAT
GGGTGGGCGTCAAAGCGTTCCGTGCTTTGGCCGTGAACGCCGCCAGTTCGGTTCGCCGCGGTGACCGCATCATTGTGGTC
GGCTCACTCATCACCGAGCAGTGGACCAATGAGCAAGGCGAACCGCGCAGTAGAACCGTTCTCGAAGCCACCAACATTGG
GCATGACCTGACCTTCGGCACCACGTCGCTGATCAAGCCACAGCGTGCCGGTAATGGGAACGGAGGCAATGGTGGCAACG
GTAACGGCAATGCCAACGGTGCCGCCGAAGGCATGGATGGCGGAAACGGGCAACGAGCATCGTCACCGCACATGAGGCCA
ACGCAATATAGTGTGGACGGTGCCGCATCCGGTGTGGGTATGGACCCGTATGCGACCTCGTCGGAATCTGGCCCCGTCGA
ATTTGGGGTCACCTCCGATTCCGGCCAATCGCCGTCGCCATCAACCGAGTCAGCGGCTGCGTCCATGGCCGATGCCGTCA
TGTCGCAACCGGACGCTGGTGCTAATCAGCCACAGTCCGCAGCCCAACAAACCTACGTCGACGGTTTCGCCGAATCTTCC
GATCCCAGCGAATCCGAATTCTGA

Upstream 100 bases:

>100_bases
GAGGTACCGCTGGGGCGTGCAAGCCGGCAATGAAGCCGGAGACAGGCTCCGGCGGTCCACATCCAAACAACAGGCCAGCA
GGCCGAGGAAAGGACCGATC

Downstream 100 bases:

>100_bases
GTGCCAACCATACATCATGAAAAACCGCTGTGTTCGCCTGTAATCGAGGCAAGCACAGCGGTTTTCTCTTACATAACGGG
GATTACCAAATGCTCACACG

Product: single-strand binding protein

Products: NA

Alternate protein names: SSB; Helix-destabilizing protein [H]

Number of amino acids: Translated: 247; Mature: 246

Protein sequence:

>247_residues
MANQQAAVTVTGFVAGDPTLGGTESFRVLTFRMGSTRSRLNPTTRQWEDYGTAWVGVKAFRALAVNAASSVRRGDRIIVV
GSLITEQWTNEQGEPRSRTVLEATNIGHDLTFGTTSLIKPQRAGNGNGGNGGNGNGNANGAAEGMDGGNGQRASSPHMRP
TQYSVDGAASGVGMDPYATSSESGPVEFGVTSDSGQSPSPSTESAAASMADAVMSQPDAGANQPQSAAQQTYVDGFAESS
DPSESEF

Sequences:

>Translated_247_residues
MANQQAAVTVTGFVAGDPTLGGTESFRVLTFRMGSTRSRLNPTTRQWEDYGTAWVGVKAFRALAVNAASSVRRGDRIIVV
GSLITEQWTNEQGEPRSRTVLEATNIGHDLTFGTTSLIKPQRAGNGNGGNGGNGNGNANGAAEGMDGGNGQRASSPHMRP
TQYSVDGAASGVGMDPYATSSESGPVEFGVTSDSGQSPSPSTESAAASMADAVMSQPDAGANQPQSAAQQTYVDGFAESS
DPSESEF
>Mature_246_residues
ANQQAAVTVTGFVAGDPTLGGTESFRVLTFRMGSTRSRLNPTTRQWEDYGTAWVGVKAFRALAVNAASSVRRGDRIIVVG
SLITEQWTNEQGEPRSRTVLEATNIGHDLTFGTTSLIKPQRAGNGNGGNGGNGNGNANGAAEGMDGGNGQRASSPHMRPT
QYSVDGAASGVGMDPYATSSESGPVEFGVTSDSGQSPSPSTESAAASMADAVMSQPDAGANQPQSAAQQTYVDGFAESSD
PSESEF

Specific function: This protein is essential for replication of the chromosome. It is also involved in DNA recombination and repair [H]

COG id: COG0629

COG function: function code L; Single-stranded DNA-binding protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 SSB domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012340
- InterPro:   IPR016027
- InterPro:   IPR000424
- InterPro:   IPR011344 [H]

Pfam domain/function: PF00436 SSB [H]

EC number: NA

Molecular weight: Translated: 25418; Mature: 25286

Theoretical pI: Translated: 4.43; Mature: 4.43

Prosite motif: PS50935 SSB

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MANQQAAVTVTGFVAGDPTLGGTESFRVLTFRMGSTRSRLNPTTRQWEDYGTAWVGVKAF
CCCCCEEEEEEEEEECCCCCCCCCCEEEEEEECCCCHHHCCCCHHHHHHHCCCHHHHHHH
RALAVNAASSVRRGDRIIVVGSLITEQWTNEQGEPRSRTVLEATNIGHDLTFGTTSLIKP
HHHHHHHHHHHHCCCEEEEECHHHHHHHCCCCCCCCCCEEEEECCCCCEECCCCHHHCCC
QRAGNGNGGNGGNGNGNANGAAEGMDGGNGQRASSPHMRPTQYSVDGAASGVGMDPYATS
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCC
SESGPVEFGVTSDSGQSPSPSTESAAASMADAVMSQPDAGANQPQSAAQQTYVDGFAESS
CCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCC
DPSESEF
CCCCCCC
>Mature Secondary Structure 
ANQQAAVTVTGFVAGDPTLGGTESFRVLTFRMGSTRSRLNPTTRQWEDYGTAWVGVKAF
CCCCEEEEEEEEEECCCCCCCCCCEEEEEEECCCCHHHCCCCHHHHHHHCCCHHHHHHH
RALAVNAASSVRRGDRIIVVGSLITEQWTNEQGEPRSRTVLEATNIGHDLTFGTTSLIKP
HHHHHHHHHHHHCCCEEEEECHHHHHHHCCCCCCCCCCEEEEECCCCCEECCCCHHHCCC
QRAGNGNGGNGGNGNGNANGAAEGMDGGNGQRASSPHMRPTQYSVDGAASGVGMDPYATS
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCC
SESGPVEFGVTSDSGQSPSPSTESAAASMADAVMSQPDAGANQPQSAAQQTYVDGFAESS
CCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCC
DPSESEF
CCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12948626 [H]