| Definition | Bifidobacterium longum subsp. infantis ATCC 15697, complete genome. |
|---|---|
| Accession | NC_011593 |
| Length | 2,832,748 |
Click here to switch to the map view.
The map label for this gene is yhhT [C]
Identifier: 213691447
GI number: 213691447
Start: 610811
End: 612463
Strand: Direct
Name: yhhT [C]
Synonym: Blon_0542
Alternate gene names: 213691447
Gene position: 610811-612463 (Clockwise)
Preceding gene: 213691445
Following gene: 213691448
Centisome position: 21.56
GC content: 60.56
Gene sequence:
>1653_bases ATGAGTGAACGCGCGCGAAACGTAAACAGCACCGACACGTCGAGAACCGGTGCCGCAGAAGCCGGGACAGACCCGGGCGA CGAGAATCGTATCGACTTTGGTACTTTGTTCCCTGCCAAGGGAGATTCCCGCAGGCCACCGGAATGGTTCGGCCGCGCGC TGCTGTATGTGGCCCTCGCCGTCATCGTGTTCATGTTCTGCTGGCGCTCGTGGGGCGACATCTCCTATCTGGTGTTCGAC ATCATCATCTCGCTGTTCCTGGCGCTGGCCGTCGAACCGCTGGTGGTGGCGCTGGTGGCTCATGGCTGGAAGCGTGGCGT GGCTTCCGCCGTCAGTCTGGTGGGCGTGGCCGTGGTCGTGGGTGTGCTGCTCACGCTGTTCGGCAATATGTTCGTACAGC AGATGATTGCCATGGTCCGCGGTTTGCCGGCAATGTATGGGCAGATTCGTGAGTTCGCGGACCAGTACACCACGTTCAAG ATGCCGGAAATCAGCAATCTTGGCATGGAAATCTTCAACAATATCCAGACCTCGTGGGTCACCGATTTCGCCGGCACCGC CATGAGTACGGTGGGTGGCCTGTTCTCCTTCCTGCTGAACCTCATGACCGTGGTAATGACCACGTATTACATCTCCGCCG CCGGCCCAAAGCTGCGCCGCTCCTTCTGCCAGTGGCTGGCCCCCAACACGCAGCGTCGATTCCTGCTGGTGTGGACCGTG GCCCAAGGCCAGATTTCGTCCTTCCTGTTCTCCCGTTCGATTCTGGCGTTGATCAACGCCATTTGCACTGCCATCTTCTT GGAGATCCTGCATGTGCCCTACTGGCTGCCGTTGGCCCTGTTCTGCGGCGTGGTATCCCAGTTCATCCCCACGGTCGGTA CCTATATCGGCGGTGCGCTGCCGGTGCTGTTCGCTTGGGGCAACCGCGGGTGGACGTACGCCGTGGCGGTGCTGGTGTTC ATCATCGTCTACCAGCAGATTGAGAACCTGATTCTCTCGCCGAGAATCTCCCAGCGCACGATGGACATCAACGCGGCCGT CGCCTTCCTCTCGGTGCTGGCGTTCGGCTCGCTGTTCGGCGCGTTCGGCGCGTTCCTGGCGCTGCCGGTCACCGCATCGC TGCAGGCCATTTTCCGTGCGTACACCAAGCGCTATGAGCTGATTGACTCACCGCTGATGAACGATCCGACTCCGGAGAAG AAGTCCAAGATCGTCGAGGCGTCCGAGGCGTTCGGCGAGCACGTATTGCAGCCAATCGGCGAGCACATGCCACGTGCGGC CAAGGGGTCCACCAGCCGTGTGCCGATGAACGAGGAACTGCGTTTGCTGCAGGAACAGATCTATGCGATTCCGCCACACG AGACGAAAGAATCCGATTTGGACGATTCCGCCACCGTGGCGATTCCGAAGAACGTGCTATCCTCCAGCGCTCGCAAGGGA TTGCGCGGCACCGAGCCGGAGTCGGATGTCGATGATACCGATAATGCCGATAATACAGTCGGTGCGGATGCAAGCTCTGA TGAGCCGGACACGGCGGCGATTCCGCAGCGTGGTGCCGCGAATACGCAGCAGCCTGAGCGGCCCGAGCAACGCAAGCAAA CCAAGCAGTCTGATCAATCTGCCTCCAGCAATCCTAGGGCGGGGTGGCGCTGA
Upstream 100 bases:
>100_bases GGATGATGATCGAAACGTTGAGCATGACATCAACAATAGAAAAGCGGGTGTACGCCGCCGGCGTATTCGAGCTTCAAACC CCTCGCTACAATGGGGAGCC
Downstream 100 bases:
>100_bases TGACCCTGCTTTCAGTACTCGATATTCTTCTGGTAATCGTCGGTGGTGCCGGCATGATATATCAGGGACTGTGTATCGTG ATGTCCCTGTTCGCCAAGCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 550; Mature: 549
Protein sequence:
>550_residues MSERARNVNSTDTSRTGAAEAGTDPGDENRIDFGTLFPAKGDSRRPPEWFGRALLYVALAVIVFMFCWRSWGDISYLVFD IIISLFLALAVEPLVVALVAHGWKRGVASAVSLVGVAVVVGVLLTLFGNMFVQQMIAMVRGLPAMYGQIREFADQYTTFK MPEISNLGMEIFNNIQTSWVTDFAGTAMSTVGGLFSFLLNLMTVVMTTYYISAAGPKLRRSFCQWLAPNTQRRFLLVWTV AQGQISSFLFSRSILALINAICTAIFLEILHVPYWLPLALFCGVVSQFIPTVGTYIGGALPVLFAWGNRGWTYAVAVLVF IIVYQQIENLILSPRISQRTMDINAAVAFLSVLAFGSLFGAFGAFLALPVTASLQAIFRAYTKRYELIDSPLMNDPTPEK KSKIVEASEAFGEHVLQPIGEHMPRAAKGSTSRVPMNEELRLLQEQIYAIPPHETKESDLDDSATVAIPKNVLSSSARKG LRGTEPESDVDDTDNADNTVGADASSDEPDTAAIPQRGAANTQQPERPEQRKQTKQSDQSASSNPRAGWR
Sequences:
>Translated_550_residues MSERARNVNSTDTSRTGAAEAGTDPGDENRIDFGTLFPAKGDSRRPPEWFGRALLYVALAVIVFMFCWRSWGDISYLVFD IIISLFLALAVEPLVVALVAHGWKRGVASAVSLVGVAVVVGVLLTLFGNMFVQQMIAMVRGLPAMYGQIREFADQYTTFK MPEISNLGMEIFNNIQTSWVTDFAGTAMSTVGGLFSFLLNLMTVVMTTYYISAAGPKLRRSFCQWLAPNTQRRFLLVWTV AQGQISSFLFSRSILALINAICTAIFLEILHVPYWLPLALFCGVVSQFIPTVGTYIGGALPVLFAWGNRGWTYAVAVLVF IIVYQQIENLILSPRISQRTMDINAAVAFLSVLAFGSLFGAFGAFLALPVTASLQAIFRAYTKRYELIDSPLMNDPTPEK KSKIVEASEAFGEHVLQPIGEHMPRAAKGSTSRVPMNEELRLLQEQIYAIPPHETKESDLDDSATVAIPKNVLSSSARKG LRGTEPESDVDDTDNADNTVGADASSDEPDTAAIPQRGAANTQQPERPEQRKQTKQSDQSASSNPRAGWR >Mature_549_residues SERARNVNSTDTSRTGAAEAGTDPGDENRIDFGTLFPAKGDSRRPPEWFGRALLYVALAVIVFMFCWRSWGDISYLVFDI IISLFLALAVEPLVVALVAHGWKRGVASAVSLVGVAVVVGVLLTLFGNMFVQQMIAMVRGLPAMYGQIREFADQYTTFKM PEISNLGMEIFNNIQTSWVTDFAGTAMSTVGGLFSFLLNLMTVVMTTYYISAAGPKLRRSFCQWLAPNTQRRFLLVWTVA QGQISSFLFSRSILALINAICTAIFLEILHVPYWLPLALFCGVVSQFIPTVGTYIGGALPVLFAWGNRGWTYAVAVLVFI IVYQQIENLILSPRISQRTMDINAAVAFLSVLAFGSLFGAFGAFLALPVTASLQAIFRAYTKRYELIDSPLMNDPTPEKK SKIVEASEAFGEHVLQPIGEHMPRAAKGSTSRVPMNEELRLLQEQIYAIPPHETKESDLDDSATVAIPKNVLSSSARKGL RGTEPESDVDDTDNADNTVGADASSDEPDTAAIPQRGAANTQQPERPEQRKQTKQSDQSASSNPRAGWR
Specific function: Unknown
COG id: COG0628
COG function: function code R; Predicted permease
Gene ontology:
Cell location: Integral Membrane Protein [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI87082271, Length=302, Percent_Identity=24.5033112582781, Blast_Score=62, Evalue=7e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 60336; Mature: 60205
Theoretical pI: Translated: 5.79; Mature: 5.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSERARNVNSTDTSRTGAAEAGTDPGDENRIDFGTLFPAKGDSRRPPEWFGRALLYVALA CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH VIVFMFCWRSWGDISYLVFDIIISLFLALAVEPLVVALVAHGWKRGVASAVSLVGVAVVV HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GVLLTLFGNMFVQQMIAMVRGLPAMYGQIREFADQYTTFKMPEISNLGMEIFNNIQTSWV HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHH TDFAGTAMSTVGGLFSFLLNLMTVVMTTYYISAAGPKLRRSFCQWLAPNTQRRFLLVWTV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCEEEEEEEE AQGQISSFLFSRSILALINAICTAIFLEILHVPYWLPLALFCGVVSQFIPTVGTYIGGAL CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH PVLFAWGNRGWTYAVAVLVFIIVYQQIENLILSPRISQRTMDINAAVAFLSVLAFGSLFG HHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH AFGAFLALPVTASLQAIFRAYTKRYELIDSPLMNDPTPEKKSKIVEASEAFGEHVLQPIG HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH EHMPRAAKGSTSRVPMNEELRLLQEQIYAIPPHETKESDLDDSATVAIPKNVLSSSARKG HHCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCEEECCHHHHHHHHHCC LRGTEPESDVDDTDNADNTVGADASSDEPDTAAIPQRGAANTQQPERPEQRKQTKQSDQS CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHC ASSNPRAGWR CCCCCCCCCC >Mature Secondary Structure SERARNVNSTDTSRTGAAEAGTDPGDENRIDFGTLFPAKGDSRRPPEWFGRALLYVALA CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH VIVFMFCWRSWGDISYLVFDIIISLFLALAVEPLVVALVAHGWKRGVASAVSLVGVAVVV HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GVLLTLFGNMFVQQMIAMVRGLPAMYGQIREFADQYTTFKMPEISNLGMEIFNNIQTSWV HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHH TDFAGTAMSTVGGLFSFLLNLMTVVMTTYYISAAGPKLRRSFCQWLAPNTQRRFLLVWTV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCEEEEEEEE AQGQISSFLFSRSILALINAICTAIFLEILHVPYWLPLALFCGVVSQFIPTVGTYIGGAL CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH PVLFAWGNRGWTYAVAVLVFIIVYQQIENLILSPRISQRTMDINAAVAFLSVLAFGSLFG HHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH AFGAFLALPVTASLQAIFRAYTKRYELIDSPLMNDPTPEKKSKIVEASEAFGEHVLQPIG HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH EHMPRAAKGSTSRVPMNEELRLLQEQIYAIPPHETKESDLDDSATVAIPKNVLSSSARKG HHCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCEEECCHHHHHHHHHCC LRGTEPESDVDDTDNADNTVGADASSDEPDTAAIPQRGAANTQQPERPEQRKQTKQSDQS CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHC ASSNPRAGWR CCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA