| Definition | Bifidobacterium longum subsp. infantis ATCC 15697, complete genome. |
|---|---|
| Accession | NC_011593 |
| Length | 2,832,748 |
Click here to switch to the map view.
The map label for this gene is 213691437
Identifier: 213691437
GI number: 213691437
Start: 601095
End: 602309
Strand: Reverse
Name: 213691437
Synonym: Blon_0532
Alternate gene names: NA
Gene position: 602309-601095 (Counterclockwise)
Preceding gene: 213691438
Following gene: 213691436
Centisome position: 21.26
GC content: 66.75
Gene sequence:
>1215_bases ATGAGCAGCAGAGCCGAGAACTGGGCATGGGAGCGCGACGACGTCAAGGGCATCACCAAGTTCGTGCTGGTGTATCTGGC CCGCCGCGCCTATTACGACGATGGCGCAGCCGCGTGGCCGAGCGTGGAGACCATCGCGTTCAACTGCGGGTGCTGTGAGC GCACCGTGATCCGTTCGTTGCAGGAGCTGGAGCGCAAGGGCTACATCAGGCCCGGCGACCAGGAGATGTCGGCGCGCAAC CCGCGCACCCGCAAGCCGATCGCCAAGGGACACCGCTCGCGCGTGTGGGACGTCGTCATGGACGGCGACCATCCCGCCGA GAACATCGAGGAGAAGCCCCGGAACCTGGACGCGCTGGCGGAAGGCGACGGCAAGCCGGATCCGATGAAGGACAATTTGT CACCCGACGGATTGTCACCCGAGCCGAAGGACGTGGAGACGAGGACAAATTGTCCCGGAATCTTGGACAGAAAGTCACCC AATAGACAAGTGATAAACAATTCTCCCCTCATCCCCTTCGGGGATGCTCCCCTCAACGCCGAACAAGCCGCCACGAAACC GGTCGCCGACCCGAAGCCCGAACCCGTTCCGACGACCGATTGGGGCAAGGCCCTGCCTCCAAGGGGTTGCAGGAACCCGC TGTGGGTGCCCGAACCCGGCAAGCTGCCCGAGCCGGTGACGGAACGCGCCGGTCAGGAGGTGCGCGTGCTCGACGGCATC CGCCGTCGCATGCTCGCCGTGGACCAGAGGTTCGATGTTCCGGCGACCATGGCCGACCGCAAGGCCGTCCACTCGTTGCT GATCGACAGGCCGTACGGCGAGATCGTCGCGACGATGGACTGGGCGTACCGCAACCGCTACTGGCTGCCCCGGCTCACCA GCGGCGCCAGGTTCGCCGCGAACTACGTGCAGCTGCGGCTGGAAATGCTCACCCATCCCGATCCGACGGGCAAGCGGGCG CCGGACGCCCCGCTGCCGGTCGTCAAGGACCCCAACCGGGCGATACCGGTCAGCTCGTCGTCCGCGAGCCGTGTGCCGAT CTACGGGGCGGCGCTGCTGCGCACCTCGCTGTGCCAGGAACACATCGAAGGCGTCATCTCGCAGGAGGCGTGCCCGGTAT GCGCGTACGACAAACGCAACCACGCCACCCACGACGTCGCCGGACGGCGCAAGGCGAAGACCGGCGCGTCGGCGGAGGCG GTGGTGCGGCCATGA
Upstream 100 bases:
>100_bases ATGCGTTGTGCCGCGCCGCCCGTCTGGGCGACGACATCGGCGCGAGGCTGCGCGAACGCCGCGAAGCGGACCCGGCGCAT GACGGCGGGAAGGTCGAGCG
Downstream 100 bases:
>100_bases GCGGGGACGGGCAGCGTCTTGAGGCGTGGAAGAAGGCCGGCGAATGCCGCGACTTCCCGCAACCATGGTCCGACTACCTG TGGTCGCTGGAGTTCGAGCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 404; Mature: 403
Protein sequence:
>404_residues MSSRAENWAWERDDVKGITKFVLVYLARRAYYDDGAAAWPSVETIAFNCGCCERTVIRSLQELERKGYIRPGDQEMSARN PRTRKPIAKGHRSRVWDVVMDGDHPAENIEEKPRNLDALAEGDGKPDPMKDNLSPDGLSPEPKDVETRTNCPGILDRKSP NRQVINNSPLIPFGDAPLNAEQAATKPVADPKPEPVPTTDWGKALPPRGCRNPLWVPEPGKLPEPVTERAGQEVRVLDGI RRRMLAVDQRFDVPATMADRKAVHSLLIDRPYGEIVATMDWAYRNRYWLPRLTSGARFAANYVQLRLEMLTHPDPTGKRA PDAPLPVVKDPNRAIPVSSSSASRVPIYGAALLRTSLCQEHIEGVISQEACPVCAYDKRNHATHDVAGRRKAKTGASAEA VVRP
Sequences:
>Translated_404_residues MSSRAENWAWERDDVKGITKFVLVYLARRAYYDDGAAAWPSVETIAFNCGCCERTVIRSLQELERKGYIRPGDQEMSARN PRTRKPIAKGHRSRVWDVVMDGDHPAENIEEKPRNLDALAEGDGKPDPMKDNLSPDGLSPEPKDVETRTNCPGILDRKSP NRQVINNSPLIPFGDAPLNAEQAATKPVADPKPEPVPTTDWGKALPPRGCRNPLWVPEPGKLPEPVTERAGQEVRVLDGI RRRMLAVDQRFDVPATMADRKAVHSLLIDRPYGEIVATMDWAYRNRYWLPRLTSGARFAANYVQLRLEMLTHPDPTGKRA PDAPLPVVKDPNRAIPVSSSSASRVPIYGAALLRTSLCQEHIEGVISQEACPVCAYDKRNHATHDVAGRRKAKTGASAEA VVRP >Mature_403_residues SSRAENWAWERDDVKGITKFVLVYLARRAYYDDGAAAWPSVETIAFNCGCCERTVIRSLQELERKGYIRPGDQEMSARNP RTRKPIAKGHRSRVWDVVMDGDHPAENIEEKPRNLDALAEGDGKPDPMKDNLSPDGLSPEPKDVETRTNCPGILDRKSPN RQVINNSPLIPFGDAPLNAEQAATKPVADPKPEPVPTTDWGKALPPRGCRNPLWVPEPGKLPEPVTERAGQEVRVLDGIR RRMLAVDQRFDVPATMADRKAVHSLLIDRPYGEIVATMDWAYRNRYWLPRLTSGARFAANYVQLRLEMLTHPDPTGKRAP DAPLPVVKDPNRAIPVSSSSASRVPIYGAALLRTSLCQEHIEGVISQEACPVCAYDKRNHATHDVAGRRKAKTGASAEAV VRP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 44874; Mature: 44743
Theoretical pI: Translated: 8.71; Mature: 8.71
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSRAENWAWERDDVKGITKFVLVYLARRAYYDDGAAAWPSVETIAFNCGCCERTVIRSL CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCHHHHHHHHH QELERKGYIRPGDQEMSARNPRTRKPIAKGHRSRVWDVVMDGDHPAENIEEKPRNLDALA HHHHHCCCCCCCCHHHHCCCCCCCCCHHHHHHHCEEEEEECCCCCHHHHHHCCCCCHHHH EGDGKPDPMKDNLSPDGLSPEPKDVETRTNCPGILDRKSPNRQVINNSPLIPFGDAPLNA CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCH EQAATKPVADPKPEPVPTTDWGKALPPRGCRNPLWVPEPGKLPEPVTERAGQEVRVLDGI HHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCEEHHHHHH RRRMLAVDQRFDVPATMADRKAVHSLLIDRPYGEIVATMDWAYRNRYWLPRLTSGARFAA HHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHH NYVQLRLEMLTHPDPTGKRAPDAPLPVVKDPNRAIPVSSSSASRVPIYGAALLRTSLCQE HHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCHHHHHHHHHHHHHH HIEGVISQEACPVCAYDKRNHATHDVAGRRKAKTGASAEAVVRP HHHHHHHHCCCCEECCCCCCCCCHHHHCCHHHCCCCCCCCCCCC >Mature Secondary Structure SSRAENWAWERDDVKGITKFVLVYLARRAYYDDGAAAWPSVETIAFNCGCCERTVIRSL CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCHHHHHHHHH QELERKGYIRPGDQEMSARNPRTRKPIAKGHRSRVWDVVMDGDHPAENIEEKPRNLDALA HHHHHCCCCCCCCHHHHCCCCCCCCCHHHHHHHCEEEEEECCCCCHHHHHHCCCCCHHHH EGDGKPDPMKDNLSPDGLSPEPKDVETRTNCPGILDRKSPNRQVINNSPLIPFGDAPLNA CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCH EQAATKPVADPKPEPVPTTDWGKALPPRGCRNPLWVPEPGKLPEPVTERAGQEVRVLDGI HHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCEEHHHHHH RRRMLAVDQRFDVPATMADRKAVHSLLIDRPYGEIVATMDWAYRNRYWLPRLTSGARFAA HHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHH NYVQLRLEMLTHPDPTGKRAPDAPLPVVKDPNRAIPVSSSSASRVPIYGAALLRTSLCQE HHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCHHHHHHHHHHHHHH HIEGVISQEACPVCAYDKRNHATHDVAGRRKAKTGASAEAVVRP HHHHHHHHCCCCEECCCCCCCCCHHHHCCHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA