Definition Bifidobacterium longum subsp. infantis ATCC 15697, complete genome.
Accession NC_011593
Length 2,832,748

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The map label for this gene is 213691436

Identifier: 213691436

GI number: 213691436

Start: 600571

End: 601098

Strand: Reverse

Name: 213691436

Synonym: Blon_0531

Alternate gene names: NA

Gene position: 601098-600571 (Counterclockwise)

Preceding gene: 213691437

Following gene: 213691435

Centisome position: 21.22

GC content: 68.18

Gene sequence:

>528_bases
ATGAGCGGGGACGGGCAGCGTCTTGAGGCGTGGAAGAAGGCCGGCGAATGCCGCGACTTCCCGCAACCATGGTCCGACTA
CCTGTGGTCGCTGGAGTTCGAGCACCGTCCCGGCGACGCGAAGGCGTTCCACTCGGTCGCCAAGGCCGTGTGCGAACGAT
GCCCGGTACGCGCCGAATGCCTGGCCTACGCGGCCAGCGGCGGACTCGAATGGGGCGTGTACGGCGGCAAGGTGTGCACC
GACCGGCGCAGGATCGCGCGCATGGCCGAAGCCGACGGCGTCCCCTGCCGGGACCGCGGCCTGCCGTGGCCGCAACGCTG
GCGGCTGCTCACGGACTGGATACGCGCCCACCGGAACGTGTTCGACGAAGCCACCGGCGAGGCCAGCGCCGAACGCCAGC
AACGACGCCTGCGCGCACGGGGCAGGACGGCCGATCGCCCCGCCCCGCATGAGCCGTCAGACAATCAAACATTCAAACAA
GCAGGAATCCAAGCAATCAGACAAGCGGACAATCAAGCGACCGACTGA

Upstream 100 bases:

>100_bases
GCCCGGTATGCGCGTACGACAAACGCAACCACGCCACCCACGACGTCGCCGGACGGCGCAAGGCGAAGACCGGCGCGTCG
GCGGAGGCGGTGGTGCGGCC

Downstream 100 bases:

>100_bases
CCGGGTTCGCATGATATCCGGCAGTCGCAAAGGAGAAGAACGAATGCGCATCGCCATAGCCAACTCCAAGGGCGGGGTCG
CGAAGACCACGTCCAGCATC

Product: transcription factor WhiB

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 175; Mature: 174

Protein sequence:

>175_residues
MSGDGQRLEAWKKAGECRDFPQPWSDYLWSLEFEHRPGDAKAFHSVAKAVCERCPVRAECLAYAASGGLEWGVYGGKVCT
DRRRIARMAEADGVPCRDRGLPWPQRWRLLTDWIRAHRNVFDEATGEASAERQQRRLRARGRTADRPAPHEPSDNQTFKQ
AGIQAIRQADNQATD

Sequences:

>Translated_175_residues
MSGDGQRLEAWKKAGECRDFPQPWSDYLWSLEFEHRPGDAKAFHSVAKAVCERCPVRAECLAYAASGGLEWGVYGGKVCT
DRRRIARMAEADGVPCRDRGLPWPQRWRLLTDWIRAHRNVFDEATGEASAERQQRRLRARGRTADRPAPHEPSDNQTFKQ
AGIQAIRQADNQATD
>Mature_174_residues
SGDGQRLEAWKKAGECRDFPQPWSDYLWSLEFEHRPGDAKAFHSVAKAVCERCPVRAECLAYAASGGLEWGVYGGKVCTD
RRRIARMAEADGVPCRDRGLPWPQRWRLLTDWIRAHRNVFDEATGEASAERQQRRLRARGRTADRPAPHEPSDNQTFKQA
GIQAIRQADNQATD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19864; Mature: 19733

Theoretical pI: Translated: 8.61; Mature: 8.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.4 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
3.4 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSGDGQRLEAWKKAGECRDFPQPWSDYLWSLEFEHRPGDAKAFHSVAKAVCERCPVRAEC
CCCCHHHHHHHHHHCCCCCCCCCHHHHHEECCCCCCCCHHHHHHHHHHHHHHHCCCHHHH
LAYAASGGLEWGVYGGKVCTDRRRIARMAEADGVPCRDRGLPWPQRWRLLTDWIRAHRNV
HHHHHCCCCEECCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH
FDEATGEASAERQQRRLRARGRTADRPAPHEPSDNQTFKQAGIQAIRQADNQATD
HHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
SGDGQRLEAWKKAGECRDFPQPWSDYLWSLEFEHRPGDAKAFHSVAKAVCERCPVRAEC
CCCHHHHHHHHHHCCCCCCCCCHHHHHEECCCCCCCCHHHHHHHHHHHHHHHCCCHHHH
LAYAASGGLEWGVYGGKVCTDRRRIARMAEADGVPCRDRGLPWPQRWRLLTDWIRAHRNV
HHHHHCCCCEECCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH
FDEATGEASAERQQRRLRARGRTADRPAPHEPSDNQTFKQAGIQAIRQADNQATD
HHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA