| Definition | Bifidobacterium longum subsp. infantis ATCC 15697, complete genome. |
|---|---|
| Accession | NC_011593 |
| Length | 2,832,748 |
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The map label for this gene is 213691423
Identifier: 213691423
GI number: 213691423
Start: 585959
End: 586687
Strand: Direct
Name: 213691423
Synonym: Blon_0518
Alternate gene names: NA
Gene position: 585959-586687 (Clockwise)
Preceding gene: 213691422
Following gene: 213691424
Centisome position: 20.69
GC content: 58.16
Gene sequence:
>729_bases GTGAGTGCCGTTTCTCCTGTTCGCGCGTTGGTCGCCTATTACTGGAACGTATGGTATTTTCTCGCCGCGGTGTTCGGAGC CGTGGCGTCCCTTCTGCTGGGTTCGTGGATTTCAGGCGCGGCGAACGGAACCCCGATAGCTGGAGGATACAGCTTCTTCT TCACCGGCACCCAGCCGGTGATTTGTCTTGCGCTGCTCTTTGTGTGCGATGCCAGGGTTGCGAAGGCGCACTATGGAGGT TTGCCCCGCCACGTGTATTCCGCATGGAAGCCGTGCTCGCTCAGAACCATATTCCGGGCTTTGATTCTGGCCGCTGTGAA CCTGCTGAGCGTATTATGCTTCGACGTCATCATGGTTCTGATGGGTACCGGGATGCATCCGAATCTGGCCGTCGTCCTGT GCTTCGTCGTGCTGCAAAGCCTTTTGACTGCCCTGATCTATTCGATCGTCGAGATTGCCGTCAATCCCGAAGTCGCCGGG ATCGTCTCGGCCATCCTTTGCTATGTATGGGTTCTTCTGCCGGGCGACTTGTCCGACTATGCGACGCCCTACGTCGCGAA CGCCCTACGGGTCGTCGGGTTGAATCTGAACGGCACCGTGATGTCGCCGGCGGAAACGGCGAGCCGATCGTCTGTCGGCC CTGTGGTGGTGGTCGTCCCGATTGTGGTGCTCCTGGTTGTCTATGTTTTGTTGAGCTGGTTCCGTCGCGAAGGAGTGGAC AGGAAATGA
Upstream 100 bases:
>100_bases GAGTCCCGGATGAATGCATCGTGATTCGACATGGCCGGGCCGCGCAATTCACGGATCTGACCGGGGTAAACCTCGCGGAC CTGTATCAGGGGAGGTAAAG
Downstream 100 bases:
>100_bases AGTCCCTATTGCGTATTGAGCGCGTGGCATTGATCCGTTGGTCGATGCTCGCCTTTGTGGCCGTGCTGCTGCTTCCGCTG TTCTTTTTGCGTTACGGGAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 242; Mature: 241
Protein sequence:
>242_residues MSAVSPVRALVAYYWNVWYFLAAVFGAVASLLLGSWISGAANGTPIAGGYSFFFTGTQPVICLALLFVCDARVAKAHYGG LPRHVYSAWKPCSLRTIFRALILAAVNLLSVLCFDVIMVLMGTGMHPNLAVVLCFVVLQSLLTALIYSIVEIAVNPEVAG IVSAILCYVWVLLPGDLSDYATPYVANALRVVGLNLNGTVMSPAETASRSSVGPVVVVVPIVVLLVVYVLLSWFRREGVD RK
Sequences:
>Translated_242_residues MSAVSPVRALVAYYWNVWYFLAAVFGAVASLLLGSWISGAANGTPIAGGYSFFFTGTQPVICLALLFVCDARVAKAHYGG LPRHVYSAWKPCSLRTIFRALILAAVNLLSVLCFDVIMVLMGTGMHPNLAVVLCFVVLQSLLTALIYSIVEIAVNPEVAG IVSAILCYVWVLLPGDLSDYATPYVANALRVVGLNLNGTVMSPAETASRSSVGPVVVVVPIVVLLVVYVLLSWFRREGVD RK >Mature_241_residues SAVSPVRALVAYYWNVWYFLAAVFGAVASLLLGSWISGAANGTPIAGGYSFFFTGTQPVICLALLFVCDARVAKAHYGGL PRHVYSAWKPCSLRTIFRALILAAVNLLSVLCFDVIMVLMGTGMHPNLAVVLCFVVLQSLLTALIYSIVEIAVNPEVAGI VSAILCYVWVLLPGDLSDYATPYVANALRVVGLNLNGTVMSPAETASRSSVGPVVVVVPIVVLLVVYVLLSWFRREGVDR K
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25956; Mature: 25825
Theoretical pI: Translated: 8.56; Mature: 8.56
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSAVSPVRALVAYYWNVWYFLAAVFGAVASLLLGSWISGAANGTPIAGGYSFFFTGTQPV CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEECCCCHH ICLALLFVCDARVAKAHYGGLPRHVYSAWKPCSLRTIFRALILAAVNLLSVLCFDVIMVL HHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH MGTGMHPNLAVVLCFVVLQSLLTALIYSIVEIAVNPEVAGIVSAILCYVWVLLPGDLSDY HCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCHHHH ATPYVANALRVVGLNLNGTVMSPAETASRSSVGPVVVVVPIVVLLVVYVLLSWFRREGVD HHHHHHHHHHHHCCCCCCCEECCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCC RK CC >Mature Secondary Structure SAVSPVRALVAYYWNVWYFLAAVFGAVASLLLGSWISGAANGTPIAGGYSFFFTGTQPV CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEECCCCHH ICLALLFVCDARVAKAHYGGLPRHVYSAWKPCSLRTIFRALILAAVNLLSVLCFDVIMVL HHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH MGTGMHPNLAVVLCFVVLQSLLTALIYSIVEIAVNPEVAGIVSAILCYVWVLLPGDLSDY HCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCHHHH ATPYVANALRVVGLNLNGTVMSPAETASRSSVGPVVVVVPIVVLLVVYVLLSWFRREGVD HHHHHHHHHHHHCCCCCCCEECCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCC RK CC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA