| Definition | Bifidobacterium longum subsp. infantis ATCC 15697, complete genome. |
|---|---|
| Accession | NC_011593 |
| Length | 2,832,748 |
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The map label for this gene is 213691418
Identifier: 213691418
GI number: 213691418
Start: 581037
End: 582089
Strand: Direct
Name: 213691418
Synonym: Blon_0513
Alternate gene names: NA
Gene position: 581037-582089 (Clockwise)
Preceding gene: 213691417
Following gene: 213691419
Centisome position: 20.51
GC content: 66.76
Gene sequence:
>1053_bases ATGAAAACACGAATCCTGACCCCGCTGATCCTGACCGGCCTGGGGATGCTGTCCGCGGGCGTGCTCGTCACCGCGCTCGT CATCCCCACGCCCACACCCGACGGACTGTCCGCGGCCACGAGCCCCGACACCGTCACGGCCAGCCGCCAGCAGTTCGACG ACGAACGGACCGTCGAGGCCTCGTTCGAGACCAGCGCGGAACAATCGCTCACCTCGCGCGCCGCCGGCACCGTCAGCGAA ACCCTGTGCATGCCCGGCCAAGCGGTCGAATCCGGCAAACGACTGCTGTCCGTGGACGGCAAACCCGTCATCGCCCTGCA CACCGACACGCCCCTCTACCGCGAGATCGGCACCGGCGACACCGGGCCCGACGTGCTCGCCCTGCAACAGGAACTCGCCC GCCTCGGCTACAACGCCGAAGGCAACGGCACCTACGGGTGGCGCACCAAGGACGGCGTCAACCAGCTGCTCTCGCAGGCC GGCGATCGCAACCCCGACGGCAGGATCGGACCGACCGACGTGGCATGGCTGCCCCAGACCACCGCCACACCAACCCAATG CACGGCCGGACTGAACACCAACCTGACGGACGGTGCCGAAATCATGAAGACCGGCGGCCAACTGACGGCCATCACCTTCC CCACGCCGGCGAACCTGAGAGAAGGCAAACGCACGTTCACGCTCTTCGGCGTCAAGACCAGCCTCGACAAGACCGACGGC AGGATCAGCGACCAGAAATTCCTCGACCAGATCCAGGCCAGCGACGGCTACAAGACCACCCTCGCCGACCAAGGCGGCAA GAAACCAACCGCCACCCTCGCGCTCGAACAACCCATCGACGCGATCAAGGTCCCGCCCTCCGCCATCACCGGCCAGAACG GCACCCGCGCCTGTGTCTCGCCCGACGGCAAACAGGCTATCCCCGTCACCGTCATCGGCTCCGCCCTCGGCGCCACGCTC ATCCAACCCGAACAAGCCGACGCGACAATCGGCAAAGTCGCCCTCGGCCACAAACTCGACGACATCCAATGCCCCGCCGC AATGCAGCACTGA
Upstream 100 bases:
>100_bases TCGACGCCTCGTCGGACGCCGCCCAGTCATGCTTCACCGGAGCCGGCCTTGCCGTCAACATCGGCTGACGAACAAGCATC CGACGAAAGGAAACGACCAC
Downstream 100 bases:
>100_bases CACAAGGAGGACGCGCATGAGCACCAGCATCCTGCCCCTCGAAACGGTCGCGGACCCCGTGCCGACACGGCCAATCGACT CCGCGCGGCCCGCGGCCGGC
Product: Peptidoglycan-binding domain 1 protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 350; Mature: 350
Protein sequence:
>350_residues MKTRILTPLILTGLGMLSAGVLVTALVIPTPTPDGLSAATSPDTVTASRQQFDDERTVEASFETSAEQSLTSRAAGTVSE TLCMPGQAVESGKRLLSVDGKPVIALHTDTPLYREIGTGDTGPDVLALQQELARLGYNAEGNGTYGWRTKDGVNQLLSQA GDRNPDGRIGPTDVAWLPQTTATPTQCTAGLNTNLTDGAEIMKTGGQLTAITFPTPANLREGKRTFTLFGVKTSLDKTDG RISDQKFLDQIQASDGYKTTLADQGGKKPTATLALEQPIDAIKVPPSAITGQNGTRACVSPDGKQAIPVTVIGSALGATL IQPEQADATIGKVALGHKLDDIQCPAAMQH
Sequences:
>Translated_350_residues MKTRILTPLILTGLGMLSAGVLVTALVIPTPTPDGLSAATSPDTVTASRQQFDDERTVEASFETSAEQSLTSRAAGTVSE TLCMPGQAVESGKRLLSVDGKPVIALHTDTPLYREIGTGDTGPDVLALQQELARLGYNAEGNGTYGWRTKDGVNQLLSQA GDRNPDGRIGPTDVAWLPQTTATPTQCTAGLNTNLTDGAEIMKTGGQLTAITFPTPANLREGKRTFTLFGVKTSLDKTDG RISDQKFLDQIQASDGYKTTLADQGGKKPTATLALEQPIDAIKVPPSAITGQNGTRACVSPDGKQAIPVTVIGSALGATL IQPEQADATIGKVALGHKLDDIQCPAAMQH >Mature_350_residues MKTRILTPLILTGLGMLSAGVLVTALVIPTPTPDGLSAATSPDTVTASRQQFDDERTVEASFETSAEQSLTSRAAGTVSE TLCMPGQAVESGKRLLSVDGKPVIALHTDTPLYREIGTGDTGPDVLALQQELARLGYNAEGNGTYGWRTKDGVNQLLSQA GDRNPDGRIGPTDVAWLPQTTATPTQCTAGLNTNLTDGAEIMKTGGQLTAITFPTPANLREGKRTFTLFGVKTSLDKTDG RISDQKFLDQIQASDGYKTTLADQGGKKPTATLALEQPIDAIKVPPSAITGQNGTRACVSPDGKQAIPVTVIGSALGATL IQPEQADATIGKVALGHKLDDIQCPAAMQH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36562; Mature: 36562
Theoretical pI: Translated: 4.89; Mature: 4.89
Prosite motif: PS00018 EF_HAND_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTRILTPLILTGLGMLSAGVLVTALVIPTPTPDGLSAATSPDTVTASRQQFDDERTVEA CCCCHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCCCCCCCCCEECHHHHCCCCCEEEH SFETSAEQSLTSRAAGTVSETLCMPGQAVESGKRLLSVDGKPVIALHTDTPLYREIGTGD HHHHHHHHHHHHHHCCHHHHHHCCCCHHHHCCCEEEEECCCEEEEEECCCCHHHHCCCCC TGPDVLALQQELARLGYNAEGNGTYGWRTKDGVNQLLSQAGDRNPDGRIGPTDVAWLPQT CCHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCEEECCCC TATPTQCTAGLNTNLTDGAEIMKTGGQLTAITFPTPANLREGKRTFTLFGVKTSLDKTDG CCCCCCEECCCCCCCCCCHHHHHCCCCEEEEECCCCCCCCCCCEEEEEEEEEECCCCCCC RISDQKFLDQIQASDGYKTTLADQGGKKPTATLALEQPIDAIKVPPSAITGQNGTRACVS CCCHHHHHHHHHCCCCCEEECCCCCCCCCCEEEEECCCCHHEECCCCCCCCCCCCEEEEC PDGKQAIPVTVIGSALGATLIQPEQADATIGKVALGHKLDDIQCPAAMQH CCCCCCCCCEEECHHHHHHHCCCCCCCCHHHHHHHCCCCCCCCCCHHCCC >Mature Secondary Structure MKTRILTPLILTGLGMLSAGVLVTALVIPTPTPDGLSAATSPDTVTASRQQFDDERTVEA CCCCHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCCCCCCCCCEECHHHHCCCCCEEEH SFETSAEQSLTSRAAGTVSETLCMPGQAVESGKRLLSVDGKPVIALHTDTPLYREIGTGD HHHHHHHHHHHHHHCCHHHHHHCCCCHHHHCCCEEEEECCCEEEEEECCCCHHHHCCCCC TGPDVLALQQELARLGYNAEGNGTYGWRTKDGVNQLLSQAGDRNPDGRIGPTDVAWLPQT CCHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCEEECCCC TATPTQCTAGLNTNLTDGAEIMKTGGQLTAITFPTPANLREGKRTFTLFGVKTSLDKTDG CCCCCCEECCCCCCCCCCHHHHHCCCCEEEEECCCCCCCCCCCEEEEEEEEEECCCCCCC RISDQKFLDQIQASDGYKTTLADQGGKKPTATLALEQPIDAIKVPPSAITGQNGTRACVS CCCHHHHHHHHHCCCCCEEECCCCCCCCCCEEEEECCCCHHEECCCCCCCCCCCCEEEEC PDGKQAIPVTVIGSALGATLIQPEQADATIGKVALGHKLDDIQCPAAMQH CCCCCCCCCEEECHHHHHHHCCCCCCCCHHHHHHHCCCCCCCCCCHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA