| Definition | Bifidobacterium longum subsp. infantis ATCC 15697, complete genome. |
|---|---|
| Accession | NC_011593 |
| Length | 2,832,748 |
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The map label for this gene is envR [C]
Identifier: 213691413
GI number: 213691413
Start: 577093
End: 577671
Strand: Reverse
Name: envR [C]
Synonym: Blon_0508
Alternate gene names: 213691413
Gene position: 577671-577093 (Counterclockwise)
Preceding gene: 213691414
Following gene: 213691412
Centisome position: 20.39
GC content: 52.68
Gene sequence:
>579_bases ATGAATGCGAGGATATCGATGAATAGTGCGGAACGGAGACGTAGAACGCGCGAAGCCCTGCTCGAAGCCGCGGCTCTCGA ATTTGAAACACAGGGATATGCGAAGACCACATTGCAGGGCGTCGCTGACCGACTTGGTTTGACGCGTGGCACAGTGCTGT TCCATTTTCACACGAAGGAAGCATTACGGGATACGCTTATCCAATGGTGCGATGAGCGCCTGTGCGCAAAAGTGTCCCAA TGTAGCGGCAGAAGCGATTTCGCTCGGATTCTCGCCGCGATTGCTGACATGCACTATGAAGATGCGCGAATACGTTCCGG ATTGCTGCTGCATGAAGAAAAAGCCCGAGCGGAGAACGCGGGGCACATGAAGTGGGAGGAAGCACTTGAACTAGTCTTGT TTGGGCAGCTCAACGACGCCCATGACAGCATTAAGGCAGGAGCCCTAATCGATATGTACATCGCCGTCATAAGGTCCGAT CGATGGAAGAATAAGCAGCAGCTCCGTCAGGCTCTTGATTTCTATCTGTCCCTAACCGGTCTGAGCAAAGCGGCTGAACT CTCTGATAACAGGCTATAA
Upstream 100 bases:
>100_bases TGTATTCCGCGCCGGAATCATGCTAAATCGACATATCGGCATGCCCATTAGATGATTTATTCACGATAAGATATCCTTAC TCATACTGACTGATTAGTCA
Downstream 100 bases:
>100_bases GGGAATCGTATGGCAAGAATCAACGATTCTTGTTGACTGACTAGTCAGTCAATGCATATTATGGGAGCACCAACCGGAAA GGTTGGACAACCCAGGGAGG
Product: transcriptional regulator, TetR family
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 192; Mature: 192
Protein sequence:
>192_residues MNARISMNSAERRRRTREALLEAAALEFETQGYAKTTLQGVADRLGLTRGTVLFHFHTKEALRDTLIQWCDERLCAKVSQ CSGRSDFARILAAIADMHYEDARIRSGLLLHEEKARAENAGHMKWEEALELVLFGQLNDAHDSIKAGALIDMYIAVIRSD RWKNKQQLRQALDFYLSLTGLSKAAELSDNRL
Sequences:
>Translated_192_residues MNARISMNSAERRRRTREALLEAAALEFETQGYAKTTLQGVADRLGLTRGTVLFHFHTKEALRDTLIQWCDERLCAKVSQ CSGRSDFARILAAIADMHYEDARIRSGLLLHEEKARAENAGHMKWEEALELVLFGQLNDAHDSIKAGALIDMYIAVIRSD RWKNKQQLRQALDFYLSLTGLSKAAELSDNRL >Mature_192_residues MNARISMNSAERRRRTREALLEAAALEFETQGYAKTTLQGVADRLGLTRGTVLFHFHTKEALRDTLIQWCDERLCAKVSQ CSGRSDFARILAAIADMHYEDARIRSGLLLHEEKARAENAGHMKWEEALELVLFGQLNDAHDSIKAGALIDMYIAVIRSD RWKNKQQLRQALDFYLSLTGLSKAAELSDNRL
Specific function: Potential Regulator Protein For The Acref/Envcd Genes. [C]
COG id: COG1309
COG function: function code K; Transcriptional regulator
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21792; Mature: 21792
Theoretical pI: Translated: 8.10; Mature: 8.10
Prosite motif: PS50977 HTH_TETR_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNARISMNSAERRRRTREALLEAAALEFETQGYAKTTLQGVADRLGLTRGTVLFHFHTKE CCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCEEEEEECCHH ALRDTLIQWCDERLCAKVSQCSGRSDFARILAAIADMHYEDARIRSGLLLHEEKARAENA HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCHHHHHHHHCHHHHHHHHHHCCC GHMKWEEALELVLFGQLNDAHDSIKAGALIDMYIAVIRSDRWKNKQQLRQALDFYLSLTG CCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH LSKAAELSDNRL HHHHHHHCCCCC >Mature Secondary Structure MNARISMNSAERRRRTREALLEAAALEFETQGYAKTTLQGVADRLGLTRGTVLFHFHTKE CCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCEEEEEECCHH ALRDTLIQWCDERLCAKVSQCSGRSDFARILAAIADMHYEDARIRSGLLLHEEKARAENA HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCHHHHHHHHCHHHHHHHHHHCCC GHMKWEEALELVLFGQLNDAHDSIKAGALIDMYIAVIRSDRWKNKQQLRQALDFYLSLTG CCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH LSKAAELSDNRL HHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: DNA [C]
Specific reaction: Protein + DNA = Protein-DNA [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA