| Definition | Bifidobacterium longum subsp. infantis ATCC 15697, complete genome. |
|---|---|
| Accession | NC_011593 |
| Length | 2,832,748 |
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The map label for this gene is aspC [H]
Identifier: 213691397
GI number: 213691397
Start: 559622
End: 560806
Strand: Direct
Name: aspC [H]
Synonym: Blon_0491
Alternate gene names: 213691397
Gene position: 559622-560806 (Clockwise)
Preceding gene: 213691396
Following gene: 213691398
Centisome position: 19.76
GC content: 36.54
Gene sequence:
>1185_bases ATGCTTTTCTCAAAAAGAATTTTAAAATTAAGTGAATCGCCGACTTTGCAATTGAATAATAAGATAAATGGCCTATTGCA AAAAGGAGAGGATGTAATTAACCTAACCGTAGGCGAGCCAGATTATGTCGAGCCTATTGAATCTAGTTATTCTGCAATAA AAGCAATTTGTGATCATTTCACTCATTATACTAATTCTTCTGGCATTATTTCTTTGAGAGAAAGTATATGCGCTAAACTC CTTAAAGAGAATAATCTTGCATATACTCCTGATCAAATTGTAGTTTCTGCGGGTGGAAAGCAAGCACTTTTCAATGCTTT TTTTGTTTTGCTGAATGGTGGAGAAGAAGTATTAATTCCTACTCCAGCTTGGCCTACTTACAAGCAACAAGTTTTATTGT GCGGAGGAACACCTGTATTAATTCCGTTAGATGAATCCTCTGAATTTAAATTGACGAAGGAGACTCTTAAAGCTTTCATT ACGCCTAGAAGTAAAATTCTAGTCCTCAATTCTCCGAGTAATCCAACAGGAGCGACATATTCTGAAGAAGAGTTGGATGA TCTTGTCTCAATCGTAGAAGAGAACGGACTATATGTTATTAGCGATGAGATATATGAGAGATTGGTATATTCGGGAACAT ACTCGTCTCCGGTCGGCATAAATGATTATATGAAAAAACATTCAGTTTTAGTTAATGGTTTTTCAAAAGCATTTGGAATG ACGGGATGGCGTATTGGATATACTGCTGCACCTCTTGATATTTCGATAAAAATTGCAGCGTTTCAAAGTCAAACAACGGC AAGCATTTCTTCGATTTCTCAAGTGGCAGCAAAATACGCAATTAATAATTTTGATAAAGAACACTTAATTGAGCTTAAAG AAAAAAGAAATTATTTGATTCATCAATTGGCTGATACTCCGTTAAAGATAGATGTAGAACCCGGAGGTGCGTTTTATTTA TTCCCCAGAGTCGATTCCGTCTTAGGGAACAGTATATATGGAGAATCCATTGATTCGGTTGAAGCTTTATGCGCTTCTTT GTTGGAGAGAGAACATGTCGCAATAACGCCGGGATCTTTTTTTGATGCTCCAAACAATGTCCGCATTTCTTATGCAAAAT CAATGCAGGAAATTTGCGATGCGGCACAGCGGATAAAAAAATATTTCAAGGAGGGCATGAAATGA
Upstream 100 bases:
>100_bases GTGGCGACAATAGTGAAAATAAGAAAATATTTATCAGAAAAAGAAATATTTTGTGCTGAATTGCATGGATATTGGAGTCA AAAATAGTCAAAGGATAATT
Downstream 100 bases:
>100_bases TTAATTTAAAAGATTATAAATGGGTAGTTTCTGAGAGTAGCAAAAAAGCGCAGAGAATGACCATGGCAGGCGATGCGCTG AGATGTGTTCTTACCTTGAA
Product: aminotransferase, class I and II
Products: NA
Alternate protein names: AspAT; Transaminase A [H]
Number of amino acids: Translated: 394; Mature: 394
Protein sequence:
>394_residues MLFSKRILKLSESPTLQLNNKINGLLQKGEDVINLTVGEPDYVEPIESSYSAIKAICDHFTHYTNSSGIISLRESICAKL LKENNLAYTPDQIVVSAGGKQALFNAFFVLLNGGEEVLIPTPAWPTYKQQVLLCGGTPVLIPLDESSEFKLTKETLKAFI TPRSKILVLNSPSNPTGATYSEEELDDLVSIVEENGLYVISDEIYERLVYSGTYSSPVGINDYMKKHSVLVNGFSKAFGM TGWRIGYTAAPLDISIKIAAFQSQTTASISSISQVAAKYAINNFDKEHLIELKEKRNYLIHQLADTPLKIDVEPGGAFYL FPRVDSVLGNSIYGESIDSVEALCASLLEREHVAITPGSFFDAPNNVRISYAKSMQEICDAAQRIKKYFKEGMK
Sequences:
>Translated_394_residues MLFSKRILKLSESPTLQLNNKINGLLQKGEDVINLTVGEPDYVEPIESSYSAIKAICDHFTHYTNSSGIISLRESICAKL LKENNLAYTPDQIVVSAGGKQALFNAFFVLLNGGEEVLIPTPAWPTYKQQVLLCGGTPVLIPLDESSEFKLTKETLKAFI TPRSKILVLNSPSNPTGATYSEEELDDLVSIVEENGLYVISDEIYERLVYSGTYSSPVGINDYMKKHSVLVNGFSKAFGM TGWRIGYTAAPLDISIKIAAFQSQTTASISSISQVAAKYAINNFDKEHLIELKEKRNYLIHQLADTPLKIDVEPGGAFYL FPRVDSVLGNSIYGESIDSVEALCASLLEREHVAITPGSFFDAPNNVRISYAKSMQEICDAAQRIKKYFKEGMK >Mature_394_residues MLFSKRILKLSESPTLQLNNKINGLLQKGEDVINLTVGEPDYVEPIESSYSAIKAICDHFTHYTNSSGIISLRESICAKL LKENNLAYTPDQIVVSAGGKQALFNAFFVLLNGGEEVLIPTPAWPTYKQQVLLCGGTPVLIPLDESSEFKLTKETLKAFI TPRSKILVLNSPSNPTGATYSEEELDDLVSIVEENGLYVISDEIYERLVYSGTYSSPVGINDYMKKHSVLVNGFSKAFGM TGWRIGYTAAPLDISIKIAAFQSQTTASISSISQVAAKYAINNFDKEHLIELKEKRNYLIHQLADTPLKIDVEPGGAFYL FPRVDSVLGNSIYGESIDSVEALCASLLEREHVAITPGSFFDAPNNVRISYAKSMQEICDAAQRIKKYFKEGMK
Specific function: Unknown
COG id: COG0436
COG function: function code E; Aspartate/tyrosine/aromatic aminotransferase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-I pyridoxal-phosphate-dependent aminotransferase family [H]
Homologues:
Organism=Homo sapiens, GI95147551, Length=317, Percent_Identity=26.813880126183, Blast_Score=123, Evalue=3e-28, Organism=Homo sapiens, GI169881279, Length=317, Percent_Identity=26.813880126183, Blast_Score=123, Evalue=3e-28, Organism=Homo sapiens, GI56713254, Length=357, Percent_Identity=28.5714285714286, Blast_Score=122, Evalue=6e-28, Organism=Homo sapiens, GI56713256, Length=315, Percent_Identity=29.2063492063492, Blast_Score=121, Evalue=1e-27, Organism=Homo sapiens, GI169881281, Length=227, Percent_Identity=25.9911894273128, Blast_Score=94, Evalue=2e-19, Organism=Homo sapiens, GI4507369, Length=376, Percent_Identity=23.6702127659574, Blast_Score=89, Evalue=5e-18, Organism=Homo sapiens, GI187936925, Length=359, Percent_Identity=26.1838440111421, Blast_Score=81, Evalue=2e-15, Organism=Homo sapiens, GI14211921, Length=359, Percent_Identity=26.1838440111421, Blast_Score=81, Evalue=2e-15, Organism=Homo sapiens, GI19263340, Length=404, Percent_Identity=23.019801980198, Blast_Score=79, Evalue=9e-15, Organism=Homo sapiens, GI215599424, Length=379, Percent_Identity=23.4828496042216, Blast_Score=79, Evalue=1e-14, Organism=Escherichia coli, GI1786816, Length=379, Percent_Identity=27.4406332453826, Blast_Score=151, Evalue=8e-38, Organism=Escherichia coli, GI1788627, Length=363, Percent_Identity=26.1707988980716, Blast_Score=127, Evalue=1e-30, Organism=Escherichia coli, GI1788722, Length=376, Percent_Identity=24.7340425531915, Blast_Score=108, Evalue=5e-25, Organism=Caenorhabditis elegans, GI17567663, Length=379, Percent_Identity=25.5936675461741, Blast_Score=124, Evalue=9e-29, Organism=Caenorhabditis elegans, GI71994472, Length=325, Percent_Identity=28, Blast_Score=119, Evalue=4e-27, Organism=Caenorhabditis elegans, GI71994476, Length=325, Percent_Identity=28, Blast_Score=118, Evalue=4e-27, Organism=Caenorhabditis elegans, GI17567369, Length=337, Percent_Identity=26.7062314540059, Blast_Score=98, Evalue=8e-21, Organism=Caenorhabditis elegans, GI71981209, Length=340, Percent_Identity=22.3529411764706, Blast_Score=68, Evalue=7e-12, Organism=Saccharomyces cerevisiae, GI6322401, Length=269, Percent_Identity=26.7657992565056, Blast_Score=105, Evalue=1e-23, Organism=Saccharomyces cerevisiae, GI6320317, Length=344, Percent_Identity=25.5813953488372, Blast_Score=79, Evalue=1e-15, Organism=Saccharomyces cerevisiae, GI6323118, Length=359, Percent_Identity=23.6768802228412, Blast_Score=77, Evalue=5e-15, Organism=Drosophila melanogaster, GI28573069, Length=391, Percent_Identity=21.9948849104859, Blast_Score=102, Evalue=6e-22, Organism=Drosophila melanogaster, GI24646114, Length=391, Percent_Identity=21.9948849104859, Blast_Score=102, Evalue=6e-22, Organism=Drosophila melanogaster, GI28573067, Length=391, Percent_Identity=21.9948849104859, Blast_Score=102, Evalue=6e-22, Organism=Drosophila melanogaster, GI28573065, Length=391, Percent_Identity=21.9948849104859, Blast_Score=102, Evalue=6e-22, Organism=Drosophila melanogaster, GI18859735, Length=415, Percent_Identity=22.6506024096386, Blast_Score=87, Evalue=2e-17, Organism=Drosophila melanogaster, GI24641770, Length=366, Percent_Identity=25.6830601092896, Blast_Score=80, Evalue=2e-15, Organism=Drosophila melanogaster, GI24641760, Length=366, Percent_Identity=25.6830601092896, Blast_Score=80, Evalue=2e-15, Organism=Drosophila melanogaster, GI24641768, Length=366, Percent_Identity=25.6830601092896, Blast_Score=80, Evalue=2e-15, Organism=Drosophila melanogaster, GI24641766, Length=366, Percent_Identity=25.6830601092896, Blast_Score=80, Evalue=2e-15, Organism=Drosophila melanogaster, GI24641764, Length=366, Percent_Identity=25.6830601092896, Blast_Score=80, Evalue=2e-15, Organism=Drosophila melanogaster, GI45551451, Length=366, Percent_Identity=25.6830601092896, Blast_Score=80, Evalue=2e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001176 - InterPro: IPR004839 - InterPro: IPR015424 - InterPro: IPR015421 - InterPro: IPR015422 [H]
Pfam domain/function: PF00155 Aminotran_1_2 [H]
EC number: =2.6.1.1 [H]
Molecular weight: Translated: 43509; Mature: 43509
Theoretical pI: Translated: 5.16; Mature: 5.16
Prosite motif: PS00105 AA_TRANSFER_CLASS_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLFSKRILKLSESPTLQLNNKINGLLQKGEDVINLTVGEPDYVEPIESSYSAIKAICDHF CCCHHHHHHCCCCCCEEECCHHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHH THYTNSSGIISLRESICAKLLKENNLAYTPDQIVVSAGGKQALFNAFFVLLNGGEEVLIP HHHCCCCCHHHHHHHHHHHHHHCCCCEECCCEEEEECCCHHHHHHHHEEEEECCCEEEEE TPAWPTYKQQVLLCGGTPVLIPLDESSEFKLTKETLKAFITPRSKILVLNSPSNPTGATY CCCCCCCCCEEEEECCCEEEEECCCCCCCEEEHHHHHHHHCCCCEEEEEECCCCCCCCCC SEEELDDLVSIVEENGLYVISDEIYERLVYSGTYSSPVGINDYMKKHSVLVNGFSKAFGM CHHHHHHHHHHHHCCCEEEEEHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCC TGWRIGYTAAPLDISIKIAAFQSQTTASISSISQVAAKYAINNFDKEHLIELKEKRNYLI CCEEECEEECCCEEEEEEEEECCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH HQLADTPLKIDVEPGGAFYLFPRVDSVLGNSIYGESIDSVEALCASLLEREHVAITPGSF HHHCCCCEEEEECCCCEEEECCCHHHHHCCCCCCCCHHHHHHHHHHHHCCCCEEECCCCC FDAPNNVRISYAKSMQEICDAAQRIKKYFKEGMK CCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MLFSKRILKLSESPTLQLNNKINGLLQKGEDVINLTVGEPDYVEPIESSYSAIKAICDHF CCCHHHHHHCCCCCCEEECCHHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHH THYTNSSGIISLRESICAKLLKENNLAYTPDQIVVSAGGKQALFNAFFVLLNGGEEVLIP HHHCCCCCHHHHHHHHHHHHHHCCCCEECCCEEEEECCCHHHHHHHHEEEEECCCEEEEE TPAWPTYKQQVLLCGGTPVLIPLDESSEFKLTKETLKAFITPRSKILVLNSPSNPTGATY CCCCCCCCCEEEEECCCEEEEECCCCCCCEEEHHHHHHHHCCCCEEEEEECCCCCCCCCC SEEELDDLVSIVEENGLYVISDEIYERLVYSGTYSSPVGINDYMKKHSVLVNGFSKAFGM CHHHHHHHHHHHHCCCEEEEEHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCC TGWRIGYTAAPLDISIKIAAFQSQTTASISSISQVAAKYAINNFDKEHLIELKEKRNYLI CCEEECEEECCCEEEEEEEEECCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH HQLADTPLKIDVEPGGAFYLFPRVDSVLGNSIYGESIDSVEALCASLLEREHVAITPGSF HHHCCCCEEEEECCCCEEEECCCHHHHHCCCCCCCCHHHHHHHHHHHHCCCCEEECCCCC FDAPNNVRISYAKSMQEICDAAQRIKKYFKEGMK CCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9537320 [H]