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The map label for this gene is yxjL [H]

Identifier: 213691369

GI number: 213691369

Start: 533228

End: 533887

Strand: Reverse

Name: yxjL [H]

Synonym: Blon_0463

Alternate gene names: 213691369

Gene position: 533887-533228 (Counterclockwise)

Preceding gene: 213691370

Following gene: 213691368

Centisome position: 18.85

GC content: 47.42

Gene sequence:

>660_bases
ATGATCCGTGTGATGCTCGTGGACGACCAGAGACTGGCACGACTCGGCTTCCAGCTCATGCTCGACGACGTGACCGACAT
CACCGTCATCGCCTCGGCGGAGAACGGGCAAACCGCCATCGACACACTCAACCAGTTGGACGCCGATCACCGGCCGTTGC
CCGACGTGATCCTCATGGACGTGCGCATGCCCGGCATGGACGGCATCGAAGCAACCCGACACATCGCCAGACACTGGCCC
GCCATCAGAATCCTCATCCTCACCACCTACGACGAAGACGACTACGCCTTCGGCGGACTCGACGCCGGAGCCAGCGGCTT
CCTACTGAAAGACATAAGTAAATCACAATTAATGGAATCGATAAAAGCTGTTTTTGAAAATGGTAAAATTCTTACTCCAC
GAATAACAAAGAAACTAGTAGAATATCAACAAAGCAAATTCATTTTTCAAGACCAGCAAAATATATTTATTGAATCATTC
AAGAGTCTTACTACTAGAGAGCGTGACATATGTGCCTTAATTGCACAAGGACTCAGTAATGACGACATAGCAAAAAACTA
TTTCTGGAAACCAAATCAGTCAAACGCTATGTTAGTCGAATTCTATCGAAGCTCCATCTTTCAAACCGCACCCAAATTGC
AATCAATTGGATTAAATTGA

Upstream 100 bases:

>100_bases
GCGGCACGTTCGCCTATGGGCCGGTCAATGGCACCGAATGGCAGGTCAAAGCGGTCATTCCCCCGACCGGGAAACAACCG
ACTGAAAGGAAGGTCCGACC

Downstream 100 bases:

>100_bases
GTGTCTTTACACAACTGAAATAGTGACATCAATTCAAACATAGGCCCATGTCAATATTCCACACATTTATGAAATATGCT
TAACGCGAAGTATTCATCTA

Product: two component transcriptional regulator, LuxR family

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 219; Mature: 219

Protein sequence:

>219_residues
MIRVMLVDDQRLARLGFQLMLDDVTDITVIASAENGQTAIDTLNQLDADHRPLPDVILMDVRMPGMDGIEATRHIARHWP
AIRILILTTYDEDDYAFGGLDAGASGFLLKDISKSQLMESIKAVFENGKILTPRITKKLVEYQQSKFIFQDQQNIFIESF
KSLTTRERDICALIAQGLSNDDIAKNYFWKPNQSNAMLVEFYRSSIFQTAPKLQSIGLN

Sequences:

>Translated_219_residues
MIRVMLVDDQRLARLGFQLMLDDVTDITVIASAENGQTAIDTLNQLDADHRPLPDVILMDVRMPGMDGIEATRHIARHWP
AIRILILTTYDEDDYAFGGLDAGASGFLLKDISKSQLMESIKAVFENGKILTPRITKKLVEYQQSKFIFQDQQNIFIESF
KSLTTRERDICALIAQGLSNDDIAKNYFWKPNQSNAMLVEFYRSSIFQTAPKLQSIGLN
>Mature_219_residues
MIRVMLVDDQRLARLGFQLMLDDVTDITVIASAENGQTAIDTLNQLDADHRPLPDVILMDVRMPGMDGIEATRHIARHWP
AIRILILTTYDEDDYAFGGLDAGASGFLLKDISKSQLMESIKAVFENGKILTPRITKKLVEYQQSKFIFQDQQNIFIESF
KSLTTRERDICALIAQGLSNDDIAKNYFWKPNQSNAMLVEFYRSSIFQTAPKLQSIGLN

Specific function: Probable member of the two-component regulatory system yxjM/yxjL [H]

COG id: COG2197

COG function: function code TK; Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

Organism=Escherichia coli, GI1788521, Length=182, Percent_Identity=36.2637362637363, Blast_Score=101, Evalue=3e-23,
Organism=Escherichia coli, GI1788222, Length=207, Percent_Identity=29.4685990338164, Blast_Score=99, Evalue=2e-22,
Organism=Escherichia coli, GI1787473, Length=182, Percent_Identity=30.2197802197802, Blast_Score=75, Evalue=5e-15,
Organism=Escherichia coli, GI1790102, Length=208, Percent_Identity=26.9230769230769, Blast_Score=74, Evalue=8e-15,
Organism=Escherichia coli, GI1788546, Length=187, Percent_Identity=27.2727272727273, Blast_Score=67, Evalue=8e-13,
Organism=Escherichia coli, GI87082052, Length=122, Percent_Identity=31.1475409836066, Blast_Score=64, Evalue=6e-12,
Organism=Escherichia coli, GI1786747, Length=181, Percent_Identity=24.3093922651934, Blast_Score=63, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011006
- InterPro:   IPR001789
- InterPro:   IPR011990
- InterPro:   IPR000792
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00196 GerE; PF00072 Response_reg [H]

EC number: NA

Molecular weight: Translated: 24804; Mature: 24804

Theoretical pI: Translated: 4.90; Mature: 4.90

Prosite motif: PS50110 RESPONSE_REGULATORY

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIRVMLVDDQRLARLGFQLMLDDVTDITVIASAENGQTAIDTLNQLDADHRPLPDVILMD
CEEEEEECCHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHCCCCCCCCCCEEEEE
VRMPGMDGIEATRHIARHWPAIRILILTTYDEDDYAFGGLDAGASGFLLKDISKSQLMES
ECCCCCCCHHHHHHHHHHCCEEEEEEEEEECCCCCEECCCCCCCCCHHHHHCCHHHHHHH
IKAVFENGKILTPRITKKLVEYQQSKFIFQDQQNIFIESFKSLTTRERDICALIAQGLSN
HHHHHHCCCEECHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHCCCC
DDIAKNYFWKPNQSNAMLVEFYRSSIFQTAPKLQSIGLN
CCHHHCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHCCCC
>Mature Secondary Structure
MIRVMLVDDQRLARLGFQLMLDDVTDITVIASAENGQTAIDTLNQLDADHRPLPDVILMD
CEEEEEECCHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHCCCCCCCCCCEEEEE
VRMPGMDGIEATRHIARHWPAIRILILTTYDEDDYAFGGLDAGASGFLLKDISKSQLMES
ECCCCCCCHHHHHHHHHHCCEEEEEEEEEECCCCCEECCCCCCCCCHHHHHCCHHHHHHH
IKAVFENGKILTPRITKKLVEYQQSKFIFQDQQNIFIESFKSLTTRERDICALIAQGLSN
HHHHHHCCCEECHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHCCCC
DDIAKNYFWKPNQSNAMLVEFYRSSIFQTAPKLQSIGLN
CCHHHCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8978088; 8969509; 9384377 [H]