Definition Bifidobacterium longum subsp. infantis ATCC 15697, complete genome.
Accession NC_011593
Length 2,832,748

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The map label for this gene is insI1 [H]

Identifier: 213691358

GI number: 213691358

Start: 519112

End: 520188

Strand: Direct

Name: insI1 [H]

Synonym: Blon_0449

Alternate gene names: 213691358

Gene position: 519112-520188 (Clockwise)

Preceding gene: 213691356

Following gene: 213691359

Centisome position: 18.33

GC content: 69.17

Gene sequence:

>1077_bases
ATGGGAGAAGTATATTCGCACCTGTCGGAAGAGGAACGCCAGGTCATCCAGATCGAGGCAGGCAACGGCGCCAGCATACG
CGGGATCGGCGCGATGCCGGGCCGCAGCCCGTCCGGCACCAGCCGGGAGATCAAGCGCAACACATGGTTCCCGTCCAACG
AGAACGAGTCGTACCGCCCGTACCGGCCGAAAAGACTGAAGACGGGGCCATGGACCGGCCGCTACCACATCGCCGGGCCC
GCGCAGCGCAAGGCCGACCGCAGGAGATCCAAGCCACGAAAGCCCTACCGGCTGTCGCACGACCGCCTGTGGGCGCGGGT
GGCCGAATGGCTGGGCCGCGGCTGGTCGCCGCCGCCCGTCAGCGGCAGGCTGCGCGTCCTGTGGCCGGACGATGCGCTCA
TGCGCGTGTGCCCGGAGACCATCTACCGATGGGTCTACTCCAGCAGGCCGCTTCGGGAACGCTGGGCGCGGTGCCTGCCG
CGAGGGCACAGGCGGCGCCGCAGGCACGGCGGCAGGAGGACGTCGCGCTTCCCGATCCCCGGCCGAGCGCCCATCTCCGA
ACGCCCGCCGGAGGCCGACGGCAGGAGCGCGTTCGGCCATTGGGAGGCCGACAGCGTCATCGGAGTGGGATGCAACCCGC
ACACCGAGGTGGAGAGGAGGACCAGGTTCCTCATGGCCCGCGTCGTTCCGGACAAGACCGCCGGCGAGAGCGTCGGGGCG
CAGCCGGACATGTTCTCGCCGCTGCCGGCCGGCGCGCGCGCCGGCGTCACGCACGACAACGGCACCGAGTTCGCCCACCA
CGAAAGGCTGCGCGACGGGCTGGGCATGGCCACGTACTTCGCCGACCCGTACTCCAGCCGGCGGCGGGGAAGCAACGAGA
ACGGGAACGGCATGATCCGCCGGTATCTGCCCGAACGCTGCGAGATACGGATGGACATGGCAAAGGAGGTCAGGGAGATC
GTCGACGAGGCCGACAACCGCCCCATGCGCGTGCTCGGCTACCGCACGCCCGCCGAGGCGTTCGCCGACGAACTGCTGGA
ATTACAGGACCAACAAGGGTGTTGCACTTCTAAATAG

Upstream 100 bases:

>100_bases
AGGAAACATATAAAAGTCAATACCCGTTGTCTAAATGAAAGTGCAACACCCGTTAGATTGGAAATTGCCTAGAAAACCAG
TCCGAAGGGATGTCGCACCT

Downstream 100 bases:

>100_bases
ACATCGGGCAATCTAAAAGGTTCTAAAAGGCTTCGGGGCAAACCTCGCATTTCCGAAGCGCCCATGCATGTCGTCGATTA
TGGATTCAGTAAGAGCATCA

Product: Integrase, catalytic region

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 358; Mature: 357

Protein sequence:

>358_residues
MGEVYSHLSEEERQVIQIEAGNGASIRGIGAMPGRSPSGTSREIKRNTWFPSNENESYRPYRPKRLKTGPWTGRYHIAGP
AQRKADRRRSKPRKPYRLSHDRLWARVAEWLGRGWSPPPVSGRLRVLWPDDALMRVCPETIYRWVYSSRPLRERWARCLP
RGHRRRRRHGGRRTSRFPIPGRAPISERPPEADGRSAFGHWEADSVIGVGCNPHTEVERRTRFLMARVVPDKTAGESVGA
QPDMFSPLPAGARAGVTHDNGTEFAHHERLRDGLGMATYFADPYSSRRRGSNENGNGMIRRYLPERCEIRMDMAKEVREI
VDEADNRPMRVLGYRTPAEAFADELLELQDQQGCCTSK

Sequences:

>Translated_358_residues
MGEVYSHLSEEERQVIQIEAGNGASIRGIGAMPGRSPSGTSREIKRNTWFPSNENESYRPYRPKRLKTGPWTGRYHIAGP
AQRKADRRRSKPRKPYRLSHDRLWARVAEWLGRGWSPPPVSGRLRVLWPDDALMRVCPETIYRWVYSSRPLRERWARCLP
RGHRRRRRHGGRRTSRFPIPGRAPISERPPEADGRSAFGHWEADSVIGVGCNPHTEVERRTRFLMARVVPDKTAGESVGA
QPDMFSPLPAGARAGVTHDNGTEFAHHERLRDGLGMATYFADPYSSRRRGSNENGNGMIRRYLPERCEIRMDMAKEVREI
VDEADNRPMRVLGYRTPAEAFADELLELQDQQGCCTSK
>Mature_357_residues
GEVYSHLSEEERQVIQIEAGNGASIRGIGAMPGRSPSGTSREIKRNTWFPSNENESYRPYRPKRLKTGPWTGRYHIAGPA
QRKADRRRSKPRKPYRLSHDRLWARVAEWLGRGWSPPPVSGRLRVLWPDDALMRVCPETIYRWVYSSRPLRERWARCLPR
GHRRRRRHGGRRTSRFPIPGRAPISERPPEADGRSAFGHWEADSVIGVGCNPHTEVERRTRFLMARVVPDKTAGESVGAQ
PDMFSPLPAGARAGVTHDNGTEFAHHERLRDGLGMATYFADPYSSRRRGSNENGNGMIRRYLPERCEIRMDMAKEVREIV
DEADNRPMRVLGYRTPAEAFADELLELQDQQGCCTSK

Specific function: Required for the transposition of the insertion element (Potential) [H]

COG id: COG2826

COG function: function code L; Transposase and inactivated derivatives, IS30 family

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 integrase catalytic domain [H]

Homologues:

Organism=Escherichia coli, GI1790736, Length=346, Percent_Identity=33.2369942196532, Blast_Score=154, Evalue=8e-39,
Organism=Escherichia coli, GI1787671, Length=346, Percent_Identity=33.2369942196532, Blast_Score=154, Evalue=8e-39,
Organism=Escherichia coli, GI1786450, Length=346, Percent_Identity=33.2369942196532, Blast_Score=154, Evalue=9e-39,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001584
- InterPro:   IPR012337
- InterPro:   IPR001598 [H]

Pfam domain/function: PF00665 rve [H]

EC number: NA

Molecular weight: Translated: 40962; Mature: 40831

Theoretical pI: Translated: 10.74; Mature: 10.74

Prosite motif: PS50994 INTEGRASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGEVYSHLSEEERQVIQIEAGNGASIRGIGAMPGRSPSGTSREIKRNTWFPSNENESYRP
CCHHHHHHHHHCCEEEEEECCCCCCEEEECCCCCCCCCCCCHHHHHCCCCCCCCCCCCCC
YRPKRLKTGPWTGRYHIAGPAQRKADRRRSKPRKPYRLSHDRLWARVAEWLGRGWSPPPV
CCCCCCCCCCCCCEEEECCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCC
SGRLRVLWPDDALMRVCPETIYRWVYSSRPLRERWARCLPRGHRRRRRHGGRRTSRFPIP
CCEEEEECCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCHHHHHHHHHCCCCCCCCCCC
GRAPISERPPEADGRSAFGHWEADSVIGVGCNPHTEVERRTRFLMARVVPDKTAGESVGA
CCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCCCC
QPDMFSPLPAGARAGVTHDNGTEFAHHERLRDGLGMATYFADPYSSRRRGSNENGNGMIR
CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCHHHHCCCHHHHHCCCCCCCCCHHH
RYLPERCEIRMDMAKEVREIVDEADNRPMRVLGYRTPAEAFADELLELQDQQGCCTSK
HHCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure 
GEVYSHLSEEERQVIQIEAGNGASIRGIGAMPGRSPSGTSREIKRNTWFPSNENESYRP
CHHHHHHHHHCCEEEEEECCCCCCEEEECCCCCCCCCCCCHHHHHCCCCCCCCCCCCCC
YRPKRLKTGPWTGRYHIAGPAQRKADRRRSKPRKPYRLSHDRLWARVAEWLGRGWSPPPV
CCCCCCCCCCCCCEEEECCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCC
SGRLRVLWPDDALMRVCPETIYRWVYSSRPLRERWARCLPRGHRRRRRHGGRRTSRFPIP
CCEEEEECCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCHHHHHHHHHCCCCCCCCCCC
GRAPISERPPEADGRSAFGHWEADSVIGVGCNPHTEVERRTRFLMARVVPDKTAGESVGA
CCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCCCC
QPDMFSPLPAGARAGVTHDNGTEFAHHERLRDGLGMATYFADPYSSRRRGSNENGNGMIR
CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCHHHHCCCHHHHHCCCCCCCCCHHH
RYLPERCEIRMDMAKEVREIVDEADNRPMRVLGYRTPAEAFADELLELQDQQGCCTSK
HHCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]