Definition Bifidobacterium longum subsp. infantis ATCC 15697, complete genome.
Accession NC_011593
Length 2,832,748

Click here to switch to the map view.

The map label for this gene is 213691352

Identifier: 213691352

GI number: 213691352

Start: 511030

End: 511773

Strand: Direct

Name: 213691352

Synonym: Blon_0443

Alternate gene names: NA

Gene position: 511030-511773 (Clockwise)

Preceding gene: 213691351

Following gene: 213691353

Centisome position: 18.04

GC content: 62.77

Gene sequence:

>744_bases
ATGGCACGCCGTAACGCCCACTTTCGCCGTCGTTTCAACGCCTCCGGGCCGCTGGAGCGCGTGCTGATTCTCATCGTTCT
CGCCGCAGCAATCGGCGTGACCATCGGCCTGTTACTGCCGCAGGTCAGCTCCGACGCGGCCAAAATCACCGGTGGCTACA
CTGCCACCGGTTCAGCCGCCGACACTTTGAACGCGCTCGCCGTAGACGACAACCAAAGCTCCTCCGGCTACGACCGCGAT
TCCTTCGGTTTCCGCACCACCGACGCCGACGGCAATGGCTGCGACGTACGCGACGATGTGCTCGCCCGCGATCTCACGGA
CATCACCTACAAATACGCCGGTTCCTGTGTGGTCGAGTCCGGCACACTGGCCGATCCGTACACCGCTCAGACCATCCATT
TTGTACGTGGCCGCGCCACCAGCGCCCAAGTGCAGATCGACCATGTGGTGGCCCTTGAAAACGCTTGGCAATCCGGTGCG
CACGACTGGTCCACTGCCAAACGCCATGAATTCGGCAATGACCCCTACAACCTGCTGGCCGTCGACGGCCCGGCCAATCA
GGAGAAGGGTTCGGCTTCCGCCGCCTACTGGCTACCCACCAACGCCGACTACCGTTGCGACTATGTGGCCCGCCAGATTG
GCGTCAAAGACAAGTACCAGCTCACCGTCACCTCCCAAGAAAAGGACGCCATGCTCGCCGTCCTCCACACCTGCCCGGGC
CAGGCCGTGCCCGCAGACGAATAA

Upstream 100 bases:

>100_bases
CGGCTTCGCCCTGACCGCCGACGAACATGCCGCCATCGACGCCCTTGACGGCCCCACCCGCGCCGGCCACGACCCCCTCA
CCTTCACCTATGCGTGATTG

Downstream 100 bases:

>100_bases
GAGGAAGGGTATCTCGCTTGAGAGAGGTACATTAGGCCATTCGCAGAGCGCTATCTGCTTTCAAAGCAGATAGCACTGTC
AGCTACACATTTCATGAGCG

Product: narrowly conserved hypothetical protein

Products: NA

Alternate protein names: Lipoprotein; Extracellular Deoxyribonuclease; S-Layer Domain-Containing Protein; Excalibur Domain-Containing Protein; 3-Oxoacyl-[Acyl-Carrier-Protein] Synthase III; S-Layer Domain Protein; Cation Transport ATPase; Excalibur Domain Protein; Conserved Membrane Protein

Number of amino acids: Translated: 247; Mature: 246

Protein sequence:

>247_residues
MARRNAHFRRRFNASGPLERVLILIVLAAAIGVTIGLLLPQVSSDAAKITGGYTATGSAADTLNALAVDDNQSSSGYDRD
SFGFRTTDADGNGCDVRDDVLARDLTDITYKYAGSCVVESGTLADPYTAQTIHFVRGRATSAQVQIDHVVALENAWQSGA
HDWSTAKRHEFGNDPYNLLAVDGPANQEKGSASAAYWLPTNADYRCDYVARQIGVKDKYQLTVTSQEKDAMLAVLHTCPG
QAVPADE

Sequences:

>Translated_247_residues
MARRNAHFRRRFNASGPLERVLILIVLAAAIGVTIGLLLPQVSSDAAKITGGYTATGSAADTLNALAVDDNQSSSGYDRD
SFGFRTTDADGNGCDVRDDVLARDLTDITYKYAGSCVVESGTLADPYTAQTIHFVRGRATSAQVQIDHVVALENAWQSGA
HDWSTAKRHEFGNDPYNLLAVDGPANQEKGSASAAYWLPTNADYRCDYVARQIGVKDKYQLTVTSQEKDAMLAVLHTCPG
QAVPADE
>Mature_246_residues
ARRNAHFRRRFNASGPLERVLILIVLAAAIGVTIGLLLPQVSSDAAKITGGYTATGSAADTLNALAVDDNQSSSGYDRDS
FGFRTTDADGNGCDVRDDVLARDLTDITYKYAGSCVVESGTLADPYTAQTIHFVRGRATSAQVQIDHVVALENAWQSGAH
DWSTAKRHEFGNDPYNLLAVDGPANQEKGSASAAYWLPTNADYRCDYVARQIGVKDKYQLTVTSQEKDAMLAVLHTCPGQ
AVPADE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26545; Mature: 26413

Theoretical pI: Translated: 5.06; Mature: 5.06

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
0.4 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MARRNAHFRRRFNASGPLERVLILIVLAAAIGVTIGLLLPQVSSDAAKITGGYTATGSAA
CCCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCEEECCCCH
DTLNALAVDDNQSSSGYDRDSFGFRTTDADGNGCDVRDDVLARDLTDITYKYAGSCVVES
HCCEEEEECCCCCCCCCCCCCCCEEECCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEC
GTLADPYTAQTIHFVRGRATSAQVQIDHVVALENAWQSGAHDWSTAKRHEFGNDPYNLLA
CCCCCCCCHHEEEEHHCCCCCCEEEEEEEEEEHHHHHCCCCCCHHHHHHCCCCCCCEEEE
VDGPANQEKGSASAAYWLPTNADYRCDYVARQIGVKDKYQLTVTSQEKDAMLAVLHTCPG
ECCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHCCCCCEEEEEECCCCCHHEEEEECCCC
QAVPADE
CCCCCCC
>Mature Secondary Structure 
ARRNAHFRRRFNASGPLERVLILIVLAAAIGVTIGLLLPQVSSDAAKITGGYTATGSAA
CCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCEEECCCCH
DTLNALAVDDNQSSSGYDRDSFGFRTTDADGNGCDVRDDVLARDLTDITYKYAGSCVVES
HCCEEEEECCCCCCCCCCCCCCCEEECCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEC
GTLADPYTAQTIHFVRGRATSAQVQIDHVVALENAWQSGAHDWSTAKRHEFGNDPYNLLA
CCCCCCCCHHEEEEHHCCCCCCEEEEEEEEEEHHHHHCCCCCCHHHHHHCCCCCCCEEEE
VDGPANQEKGSASAAYWLPTNADYRCDYVARQIGVKDKYQLTVTSQEKDAMLAVLHTCPG
ECCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHCCCCCEEEEEECCCCCHHEEEEECCCC
QAVPADE
CCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA