| Definition | Bifidobacterium longum subsp. infantis ATCC 15697, complete genome. |
|---|---|
| Accession | NC_011593 |
| Length | 2,832,748 |
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The map label for this gene is 213691352
Identifier: 213691352
GI number: 213691352
Start: 511030
End: 511773
Strand: Direct
Name: 213691352
Synonym: Blon_0443
Alternate gene names: NA
Gene position: 511030-511773 (Clockwise)
Preceding gene: 213691351
Following gene: 213691353
Centisome position: 18.04
GC content: 62.77
Gene sequence:
>744_bases ATGGCACGCCGTAACGCCCACTTTCGCCGTCGTTTCAACGCCTCCGGGCCGCTGGAGCGCGTGCTGATTCTCATCGTTCT CGCCGCAGCAATCGGCGTGACCATCGGCCTGTTACTGCCGCAGGTCAGCTCCGACGCGGCCAAAATCACCGGTGGCTACA CTGCCACCGGTTCAGCCGCCGACACTTTGAACGCGCTCGCCGTAGACGACAACCAAAGCTCCTCCGGCTACGACCGCGAT TCCTTCGGTTTCCGCACCACCGACGCCGACGGCAATGGCTGCGACGTACGCGACGATGTGCTCGCCCGCGATCTCACGGA CATCACCTACAAATACGCCGGTTCCTGTGTGGTCGAGTCCGGCACACTGGCCGATCCGTACACCGCTCAGACCATCCATT TTGTACGTGGCCGCGCCACCAGCGCCCAAGTGCAGATCGACCATGTGGTGGCCCTTGAAAACGCTTGGCAATCCGGTGCG CACGACTGGTCCACTGCCAAACGCCATGAATTCGGCAATGACCCCTACAACCTGCTGGCCGTCGACGGCCCGGCCAATCA GGAGAAGGGTTCGGCTTCCGCCGCCTACTGGCTACCCACCAACGCCGACTACCGTTGCGACTATGTGGCCCGCCAGATTG GCGTCAAAGACAAGTACCAGCTCACCGTCACCTCCCAAGAAAAGGACGCCATGCTCGCCGTCCTCCACACCTGCCCGGGC CAGGCCGTGCCCGCAGACGAATAA
Upstream 100 bases:
>100_bases CGGCTTCGCCCTGACCGCCGACGAACATGCCGCCATCGACGCCCTTGACGGCCCCACCCGCGCCGGCCACGACCCCCTCA CCTTCACCTATGCGTGATTG
Downstream 100 bases:
>100_bases GAGGAAGGGTATCTCGCTTGAGAGAGGTACATTAGGCCATTCGCAGAGCGCTATCTGCTTTCAAAGCAGATAGCACTGTC AGCTACACATTTCATGAGCG
Product: narrowly conserved hypothetical protein
Products: NA
Alternate protein names: Lipoprotein; Extracellular Deoxyribonuclease; S-Layer Domain-Containing Protein; Excalibur Domain-Containing Protein; 3-Oxoacyl-[Acyl-Carrier-Protein] Synthase III; S-Layer Domain Protein; Cation Transport ATPase; Excalibur Domain Protein; Conserved Membrane Protein
Number of amino acids: Translated: 247; Mature: 246
Protein sequence:
>247_residues MARRNAHFRRRFNASGPLERVLILIVLAAAIGVTIGLLLPQVSSDAAKITGGYTATGSAADTLNALAVDDNQSSSGYDRD SFGFRTTDADGNGCDVRDDVLARDLTDITYKYAGSCVVESGTLADPYTAQTIHFVRGRATSAQVQIDHVVALENAWQSGA HDWSTAKRHEFGNDPYNLLAVDGPANQEKGSASAAYWLPTNADYRCDYVARQIGVKDKYQLTVTSQEKDAMLAVLHTCPG QAVPADE
Sequences:
>Translated_247_residues MARRNAHFRRRFNASGPLERVLILIVLAAAIGVTIGLLLPQVSSDAAKITGGYTATGSAADTLNALAVDDNQSSSGYDRD SFGFRTTDADGNGCDVRDDVLARDLTDITYKYAGSCVVESGTLADPYTAQTIHFVRGRATSAQVQIDHVVALENAWQSGA HDWSTAKRHEFGNDPYNLLAVDGPANQEKGSASAAYWLPTNADYRCDYVARQIGVKDKYQLTVTSQEKDAMLAVLHTCPG QAVPADE >Mature_246_residues ARRNAHFRRRFNASGPLERVLILIVLAAAIGVTIGLLLPQVSSDAAKITGGYTATGSAADTLNALAVDDNQSSSGYDRDS FGFRTTDADGNGCDVRDDVLARDLTDITYKYAGSCVVESGTLADPYTAQTIHFVRGRATSAQVQIDHVVALENAWQSGAH DWSTAKRHEFGNDPYNLLAVDGPANQEKGSASAAYWLPTNADYRCDYVARQIGVKDKYQLTVTSQEKDAMLAVLHTCPGQ AVPADE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26545; Mature: 26413
Theoretical pI: Translated: 5.06; Mature: 5.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 0.4 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MARRNAHFRRRFNASGPLERVLILIVLAAAIGVTIGLLLPQVSSDAAKITGGYTATGSAA CCCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCEEECCCCH DTLNALAVDDNQSSSGYDRDSFGFRTTDADGNGCDVRDDVLARDLTDITYKYAGSCVVES HCCEEEEECCCCCCCCCCCCCCCEEECCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEC GTLADPYTAQTIHFVRGRATSAQVQIDHVVALENAWQSGAHDWSTAKRHEFGNDPYNLLA CCCCCCCCHHEEEEHHCCCCCCEEEEEEEEEEHHHHHCCCCCCHHHHHHCCCCCCCEEEE VDGPANQEKGSASAAYWLPTNADYRCDYVARQIGVKDKYQLTVTSQEKDAMLAVLHTCPG ECCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHCCCCCEEEEEECCCCCHHEEEEECCCC QAVPADE CCCCCCC >Mature Secondary Structure ARRNAHFRRRFNASGPLERVLILIVLAAAIGVTIGLLLPQVSSDAAKITGGYTATGSAA CCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCEEECCCCH DTLNALAVDDNQSSSGYDRDSFGFRTTDADGNGCDVRDDVLARDLTDITYKYAGSCVVES HCCEEEEECCCCCCCCCCCCCCCEEECCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEC GTLADPYTAQTIHFVRGRATSAQVQIDHVVALENAWQSGAHDWSTAKRHEFGNDPYNLLA CCCCCCCCHHEEEEHHCCCCCCEEEEEEEEEEHHHHHCCCCCCHHHHHHCCCCCCCEEEE VDGPANQEKGSASAAYWLPTNADYRCDYVARQIGVKDKYQLTVTSQEKDAMLAVLHTCPG ECCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHCCCCCEEEEEECCCCCHHEEEEECCCC QAVPADE CCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA