| Definition | Bifidobacterium longum subsp. infantis ATCC 15697, complete genome. |
|---|---|
| Accession | NC_011593 |
| Length | 2,832,748 |
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The map label for this gene is 213691337
Identifier: 213691337
GI number: 213691337
Start: 490202
End: 491419
Strand: Direct
Name: 213691337
Synonym: Blon_0425
Alternate gene names: NA
Gene position: 490202-491419 (Clockwise)
Preceding gene: 213691336
Following gene: 213691338
Centisome position: 17.3
GC content: 57.8
Gene sequence:
>1218_bases ATGGCATTAGATGTTGGCAAAGCGTTGAAATCCAAGACCTTGGTGGTCGGCGTCTTGTCGATGTCGTTGCTGATGTCCGC CAGCAATGCAGTCAGCGGCACCATACCGGCGATGAAGGAGGCGTTCTCCGACTATTCCGCGGCGAACGTCGAACTGCTGA CCACGGTGCCGACGATCGGCTCGATGGTCGGCACGGCATTGACCGGCCTATTCGCCAATGCCATCGGCAGGAAGAAAATC GCGATGGCGGGATTCCTCATATCCGCCGTCACAGGCGTGATTCCGGCGTTCTTCCCGTACTATTGGCCGATTCTCATATC GCGTATGTTCTTCGGCTTCGGGTCGGCGCTGTTCGTCACCTTGAGTGTGTCGTACATCACCGACCTGTATGACGGCGATA TGCAACGCAAGCTGCTTGGGTGGAGACAGGCGGTCGGCAATCTTGGCGACGTCGTGCTGCTGTTCGTCGCCAGTCTGCTG ATCACCATCAACTGGCAATCCACGTACCTCATCTTCTTCCTGTTGTTCGTCCCCATGGTGCTCGTGGGCATGTTCATTCC GAAGGAGTTCGATAACTTCAGCATTCGCAGCGCGCTCGTCGACGATGAGGGCCACGTCGTCGACAAGAGCGCCTCGCAGA AGCAGACGACGAACTGGCAGGTGCTGTGGCTGGCGTTCATCTTCCTGGTGGTCTCCATGCTTTACAACGTCATGTCCATC AAGCTCGCCAGCTATGTGGTCGATGAAGGCATCGGTTCCGCATCGCTCGCCACATTGATCTTCAGCTTCCTCGTCGTCGC CACCATCCTCTCCGGCGTGTTGTTCGACAAGGTCGCCAAGGTCACCAAGCGCCTGACGGTGACCATCTCCGAAGTGGTCA TCGGCATCTGTTTCATCGCCACTGCGCTGACGAAGAACGTGCCGCTGATGTTCGCCCTGGTGCTGATTGCCGGCTTCGCA TGGGGCATCATCAACCCCGCGCTGACCGCACGATTCGTGGACTACTCGCCCGCGCACTCGATGAACCTGACCACGTCCAT CGTGATTATCGGCATCAACATCGGCTGTCTGATCTCCCCGTACTTCTTCGCGCTGACGGCAAGCATCTTCGGCAATTCCT CGGCCGGATTCGCCATCATCGTCGGTGGTGCGCTCTACCTCGTGATGGTGGTCATCGAGCTGATCACCCTCAAGGTGGAC AAGAAGCTCACGGTGTGA
Upstream 100 bases:
>100_bases AATTCCCGCTGCCCGCGTAATCGATAACGATTGCGCGTTGTATGGCGAAAGACGACGCCGTCTTCCGCCGAATAGAAAAT AGAAAGAAACGAGTCTGACA
Downstream 100 bases:
>100_bases TTCCCGCGGCGACGGAGCCGTACCGGAACCGGACGACGGCAATCAACGACCAGCAACCAACAACCAGCAACCAATCAGAC ACACAGACAACGAACAAAGG
Product: major facilitator superfamily MFS_1
Products: NA
Alternate protein names: Facilitator Superfamily Protein; Facilitator Superfamily Transporter; Transporter Protein; Permease Of Facilitator Superfamily; Facilitator Superfamily Transporter Permease; General Substrate Transporter Facilitator Superfamily; MFS Family Transporter Protein; Transporter-Like Membrane Protein; Permease; Transporter Facilitator Family; Arabinose Efflux Permease; Permease Of Facilitator Superfamily Protein; MFS Family Transporter; Multidrug Efflux Permease; Facilitator Family Protein; Facilitator Superfamily Transporter Efflux Protein; Ypothetical Protein SMU.
Number of amino acids: Translated: 405; Mature: 404
Protein sequence:
>405_residues MALDVGKALKSKTLVVGVLSMSLLMSASNAVSGTIPAMKEAFSDYSAANVELLTTVPTIGSMVGTALTGLFANAIGRKKI AMAGFLISAVTGVIPAFFPYYWPILISRMFFGFGSALFVTLSVSYITDLYDGDMQRKLLGWRQAVGNLGDVVLLFVASLL ITINWQSTYLIFFLLFVPMVLVGMFIPKEFDNFSIRSALVDDEGHVVDKSASQKQTTNWQVLWLAFIFLVVSMLYNVMSI KLASYVVDEGIGSASLATLIFSFLVVATILSGVLFDKVAKVTKRLTVTISEVVIGICFIATALTKNVPLMFALVLIAGFA WGIINPALTARFVDYSPAHSMNLTTSIVIIGINIGCLISPYFFALTASIFGNSSAGFAIIVGGALYLVMVVIELITLKVD KKLTV
Sequences:
>Translated_405_residues MALDVGKALKSKTLVVGVLSMSLLMSASNAVSGTIPAMKEAFSDYSAANVELLTTVPTIGSMVGTALTGLFANAIGRKKI AMAGFLISAVTGVIPAFFPYYWPILISRMFFGFGSALFVTLSVSYITDLYDGDMQRKLLGWRQAVGNLGDVVLLFVASLL ITINWQSTYLIFFLLFVPMVLVGMFIPKEFDNFSIRSALVDDEGHVVDKSASQKQTTNWQVLWLAFIFLVVSMLYNVMSI KLASYVVDEGIGSASLATLIFSFLVVATILSGVLFDKVAKVTKRLTVTISEVVIGICFIATALTKNVPLMFALVLIAGFA WGIINPALTARFVDYSPAHSMNLTTSIVIIGINIGCLISPYFFALTASIFGNSSAGFAIIVGGALYLVMVVIELITLKVD KKLTV >Mature_404_residues ALDVGKALKSKTLVVGVLSMSLLMSASNAVSGTIPAMKEAFSDYSAANVELLTTVPTIGSMVGTALTGLFANAIGRKKIA MAGFLISAVTGVIPAFFPYYWPILISRMFFGFGSALFVTLSVSYITDLYDGDMQRKLLGWRQAVGNLGDVVLLFVASLLI TINWQSTYLIFFLLFVPMVLVGMFIPKEFDNFSIRSALVDDEGHVVDKSASQKQTTNWQVLWLAFIFLVVSMLYNVMSIK LASYVVDEGIGSASLATLIFSFLVVATILSGVLFDKVAKVTKRLTVTISEVVIGICFIATALTKNVPLMFALVLIAGFAW GIINPALTARFVDYSPAHSMNLTTSIVIIGINIGCLISPYFFALTASIFGNSSAGFAIIVGGALYLVMVVIELITLKVDK KLTV
Specific function: Unknown
COG id: COG0477
COG function: function code GEPR; Permeases of the major facilitator superfamily
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43606; Mature: 43474
Theoretical pI: Translated: 9.17; Mature: 9.17
Prosite motif: PS50850 MFS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALDVGKALKSKTLVVGVLSMSLLMSASNAVSGTIPAMKEAFSDYSAANVELLTTVPTIG CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCCEEEEEEHHHHH SMVGTALTGLFANAIGRKKIAMAGFLISAVTGVIPAFFPYYWPILISRMFFGFGSALFVT HHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH LSVSYITDLYDGDMQRKLLGWRQAVGNLGDVVLLFVASLLITINWQSTYLIFFLLFVPMV HHHHHHHHHHCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHEECCCHHHHHHHHHHHHHH LVGMFIPKEFDNFSIRSALVDDEGHVVDKSASQKQTTNWQVLWLAFIFLVVSMLYNVMSI HHHHHCCCCCCCCHHHHHHCCCCCCEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH KLASYVVDEGIGSASLATLIFSFLVVATILSGVLFDKVAKVTKRLTVTISEVVIGICFIA HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TALTKNVPLMFALVLIAGFAWGIINPALTARFVDYSPAHSMNLTTSIVIIGINIGCLISP HHHHCCCHHHHHHHHHHHHHHHHHCHHHHHHHCCCCCCCCCCCEEEEEEEEECHHHHHHH YFFALTASIFGNSSAGFAIIVGGALYLVMVVIELITLKVDKKLTV HHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure ALDVGKALKSKTLVVGVLSMSLLMSASNAVSGTIPAMKEAFSDYSAANVELLTTVPTIG CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCCEEEEEEHHHHH SMVGTALTGLFANAIGRKKIAMAGFLISAVTGVIPAFFPYYWPILISRMFFGFGSALFVT HHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH LSVSYITDLYDGDMQRKLLGWRQAVGNLGDVVLLFVASLLITINWQSTYLIFFLLFVPMV HHHHHHHHHHCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHEECCCHHHHHHHHHHHHHH LVGMFIPKEFDNFSIRSALVDDEGHVVDKSASQKQTTNWQVLWLAFIFLVVSMLYNVMSI HHHHHCCCCCCCCHHHHHHCCCCCCEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH KLASYVVDEGIGSASLATLIFSFLVVATILSGVLFDKVAKVTKRLTVTISEVVIGICFIA HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TALTKNVPLMFALVLIAGFAWGIINPALTARFVDYSPAHSMNLTTSIVIIGINIGCLISP HHHHCCCHHHHHHHHHHHHHHHHHCHHHHHHHCCCCCCCCCCCEEEEEEEEECHHHHHHH YFFALTASIFGNSSAGFAIIVGGALYLVMVVIELITLKVDKKLTV HHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA