| Definition | Bifidobacterium longum subsp. infantis ATCC 15697, complete genome. |
|---|---|
| Accession | NC_011593 |
| Length | 2,832,748 |
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The map label for this gene is 213691316
Identifier: 213691316
GI number: 213691316
Start: 464618
End: 465508
Strand: Reverse
Name: 213691316
Synonym: Blon_0403
Alternate gene names: NA
Gene position: 465508-464618 (Counterclockwise)
Preceding gene: 213691317
Following gene: 213691315
Centisome position: 16.43
GC content: 63.97
Gene sequence:
>891_bases ATGACTATGAGCGATGACCACCCCACTGGATACGTCGATCTGACCAAACCGAATGCGGACACCGCATCGTCCACTCCGGA GCCGTCCGCCCCGGAACCGCCCGCGTCTACGCAAGCCGCGCCGGCACCCACCGAAGAGGCCGATGTTCTCGCCGGATCGC CGCCCGCCGCGCCTACCCCTACTCCGGCACAGATGCAGGCCAAAGCGCAGGCCCAAGCAGCTCAGCAGACCCGGGCACAA GCTCAGACCGCTCAGGCCGCCGGCACTCGCCCCTCGTTCATGAACGAAATGCCCGACCTGCGAGAAACCACGGACGACGA CCCGGCCACGGTCAAGAGCCGCGAGGAATTCACCACGGTGTATGACATCATCGACCAGCTCGAGGTGGCACTGGGCGAAG CGAAGTCCAGCATATTCGCCCCCGGCATGGTGAAGGTTGACCGAGACGAATTCACCGACCAGCTTTCCGAGTTGAAGAAA ATGCTGCCGGTGCAGTTGGAGCGCGCCTCCGCCCTCATGCGCGAGGCCGAGCGCCGTCTGGAATCGGCACAGACCCAGTC CAACGCCATCGTCGCCTCCGCACAAAGCCGCGCAGCCGACATGATCAAGGACGCCAACGAACAGGCACAGTTCCTGGCCG GCCAGGAGAACGTCACCGAGCTTGCACGGCAGAAAGCGCGCGCGATTCTTGACCAGGCACAGACCAGAGCCGACCATCTG ACCCAAGGCGCGGACCAGTACTGCACTACGGTGATGGAAGGGCTGTCCCAGCAGCTCGGCAAACTCAGTCAGGATGTGCA GGCCGGTCTTAACGTGCTGGAAGAGCGCCAGCGCGCGGCCGGAGAACGGATGCCGCACCTGACGCTGAACGACTATCCCG AAGCCCAGTAA
Upstream 100 bases:
>100_bases CGCCATGGGGGCGACGTGACCGGCATGGTGCCCGATTGCGTCGTGCCGATGCTGGCCGATGCTCTGGCCGAGGAACGTCA GCGGAAGGACTGATGCACTA
Downstream 100 bases:
>100_bases CACCAGCAACGCCGGCAACATCAGCAACGCCGGCAACATCAGTAACGCGAATAACGCCAGTAACGAATAACTCCAGCCAA CATACGAAAGGCACCAAGAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 296; Mature: 295
Protein sequence:
>296_residues MTMSDDHPTGYVDLTKPNADTASSTPEPSAPEPPASTQAAPAPTEEADVLAGSPPAAPTPTPAQMQAKAQAQAAQQTRAQ AQTAQAAGTRPSFMNEMPDLRETTDDDPATVKSREEFTTVYDIIDQLEVALGEAKSSIFAPGMVKVDRDEFTDQLSELKK MLPVQLERASALMREAERRLESAQTQSNAIVASAQSRAADMIKDANEQAQFLAGQENVTELARQKARAILDQAQTRADHL TQGADQYCTTVMEGLSQQLGKLSQDVQAGLNVLEERQRAAGERMPHLTLNDYPEAQ
Sequences:
>Translated_296_residues MTMSDDHPTGYVDLTKPNADTASSTPEPSAPEPPASTQAAPAPTEEADVLAGSPPAAPTPTPAQMQAKAQAQAAQQTRAQ AQTAQAAGTRPSFMNEMPDLRETTDDDPATVKSREEFTTVYDIIDQLEVALGEAKSSIFAPGMVKVDRDEFTDQLSELKK MLPVQLERASALMREAERRLESAQTQSNAIVASAQSRAADMIKDANEQAQFLAGQENVTELARQKARAILDQAQTRADHL TQGADQYCTTVMEGLSQQLGKLSQDVQAGLNVLEERQRAAGERMPHLTLNDYPEAQ >Mature_295_residues TMSDDHPTGYVDLTKPNADTASSTPEPSAPEPPASTQAAPAPTEEADVLAGSPPAAPTPTPAQMQAKAQAQAAQQTRAQA QTAQAAGTRPSFMNEMPDLRETTDDDPATVKSREEFTTVYDIIDQLEVALGEAKSSIFAPGMVKVDRDEFTDQLSELKKM LPVQLERASALMREAERRLESAQTQSNAIVASAQSRAADMIKDANEQAQFLAGQENVTELARQKARAILDQAQTRADHLT QGADQYCTTVMEGLSQQLGKLSQDVQAGLNVLEERQRAAGERMPHLTLNDYPEAQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31935; Mature: 31803
Theoretical pI: Translated: 4.27; Mature: 4.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTMSDDHPTGYVDLTKPNADTASSTPEPSAPEPPASTQAAPAPTEEADVLAGSPPAAPTP CCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC TPAQMQAKAQAQAAQQTRAQAQTAQAAGTRPSFMNEMPDLRETTDDDPATVKSREEFTTV CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCHHHHCCCCCCHHHHHHHHHHHH YDIIDQLEVALGEAKSSIFAPGMVKVDRDEFTDQLSELKKMLPVQLERASALMREAERRL HHHHHHHHHHHHHHHHHHCCCCCEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ESAQTQSNAIVASAQSRAADMIKDANEQAQFLAGQENVTELARQKARAILDQAQTRADHL HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH TQGADQYCTTVMEGLSQQLGKLSQDVQAGLNVLEERQRAAGERMPHLTLNDYPEAQ HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC >Mature Secondary Structure TMSDDHPTGYVDLTKPNADTASSTPEPSAPEPPASTQAAPAPTEEADVLAGSPPAAPTP CCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC TPAQMQAKAQAQAAQQTRAQAQTAQAAGTRPSFMNEMPDLRETTDDDPATVKSREEFTTV CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCHHHHCCCCCCHHHHHHHHHHHH YDIIDQLEVALGEAKSSIFAPGMVKVDRDEFTDQLSELKKMLPVQLERASALMREAERRL HHHHHHHHHHHHHHHHHHCCCCCEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ESAQTQSNAIVASAQSRAADMIKDANEQAQFLAGQENVTELARQKARAILDQAQTRADHL HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH TQGADQYCTTVMEGLSQQLGKLSQDVQAGLNVLEERQRAAGERMPHLTLNDYPEAQ HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA