Definition Bifidobacterium longum subsp. infantis ATCC 15697, complete genome.
Accession NC_011593
Length 2,832,748

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The map label for this gene is 213691315

Identifier: 213691315

GI number: 213691315

Start: 463882

End: 464511

Strand: Reverse

Name: 213691315

Synonym: Blon_0402

Alternate gene names: NA

Gene position: 464511-463882 (Counterclockwise)

Preceding gene: 213691316

Following gene: 213691314

Centisome position: 16.4

GC content: 61.11

Gene sequence:

>630_bases
ATGGCACGAGTTGAAGATTCCCCGTGGGCCATTCCGGTAGCGCAGATTGCTTCGCGCGCCGGTCAATCCAAGCCGATTGA
CGCCGATTTCCCAGCACCTTCCGGCATTGGCGACAGCATTGTCGGCATCAAGGAAGGTGAGCCCGTACACGTGAGCGGGC
AGTTCGATTCGATTGTGGACGGCCTGATCTTCACCGGCCGCCTGGTCGCGCCATTCGTCAGCGAGTGCACGCGCTGCCTG
AAGCCGATTGACGAGGACTGGCCGGTTGATGTGACGGTGTTCTTCCCGTATGAGTCGGGTCAGGACAAGGCCAACGGCAA
GGGTGGCAAGAACAAGAAGGACGACGAGATCGACATCATCGCCGGCGAGGACGAATCGGAAGACACGTATCCGCTGCTGG
AGAACGGCGCATTCGCGGACATCGAGGCGATGATCCGCGACACGCTGGTCGAATCGCTGCCGTTGCAGCCACTGTGCCGA
CCGGATTGCAAGGGTCTGTGCTCGCAGTGCGGTGCCGATCTGAACGAGGATCCCGATCATCATCACGATGTGACGGATAT
CCGTTTCGCCGGATTGGCGGGGCTCAAAGCCCAGCTCGAGGCCGAGCAGAACGGCGAGCAGGCCGAGTGA

Upstream 100 bases:

>100_bases
CAACGCCGGCAACATCAGCAACGCCGGCAACATCAGTAACGCGAATAACGCCAGTAACGAATAACTCCAGCCAACATACG
AAAGGCACCAAGAACATACC

Downstream 100 bases:

>100_bases
CGCGCGCCTGAACGGAGTTTGTACGAGCCGTGCGTTAAGATAACGGACGCTTAAGCTCAATTGTTCGAACGAAATAGAGG
ATACTCAAATGGCACTGCCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 209; Mature: 208

Protein sequence:

>209_residues
MARVEDSPWAIPVAQIASRAGQSKPIDADFPAPSGIGDSIVGIKEGEPVHVSGQFDSIVDGLIFTGRLVAPFVSECTRCL
KPIDEDWPVDVTVFFPYESGQDKANGKGGKNKKDDEIDIIAGEDESEDTYPLLENGAFADIEAMIRDTLVESLPLQPLCR
PDCKGLCSQCGADLNEDPDHHHDVTDIRFAGLAGLKAQLEAEQNGEQAE

Sequences:

>Translated_209_residues
MARVEDSPWAIPVAQIASRAGQSKPIDADFPAPSGIGDSIVGIKEGEPVHVSGQFDSIVDGLIFTGRLVAPFVSECTRCL
KPIDEDWPVDVTVFFPYESGQDKANGKGGKNKKDDEIDIIAGEDESEDTYPLLENGAFADIEAMIRDTLVESLPLQPLCR
PDCKGLCSQCGADLNEDPDHHHDVTDIRFAGLAGLKAQLEAEQNGEQAE
>Mature_208_residues
ARVEDSPWAIPVAQIASRAGQSKPIDADFPAPSGIGDSIVGIKEGEPVHVSGQFDSIVDGLIFTGRLVAPFVSECTRCLK
PIDEDWPVDVTVFFPYESGQDKANGKGGKNKKDDEIDIIAGEDESEDTYPLLENGAFADIEAMIRDTLVESLPLQPLCRP
DCKGLCSQCGADLNEDPDHHHDVTDIRFAGLAGLKAQLEAEQNGEQAE

Specific function: Unknown

COG id: COG1399

COG function: function code R; Predicted metal-binding, possibly nucleic acid-binding protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To M.leprae ML1660 [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003772 [H]

Pfam domain/function: PF02620 DUF177 [H]

EC number: NA

Molecular weight: Translated: 22507; Mature: 22376

Theoretical pI: Translated: 4.02; Mature: 4.02

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.9 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
2.9 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MARVEDSPWAIPVAQIASRAGQSKPIDADFPAPSGIGDSIVGIKEGEPVHVSGQFDSIVD
CCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCEEECCCCCEEEECCCHHHHHH
GLIFTGRLVAPFVSECTRCLKPIDEDWPVDVTVFFPYESGQDKANGKGGKNKKDDEIDII
HHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCEEEE
AGEDESEDTYPLLENGAFADIEAMIRDTLVESLPLQPLCRPDCKGLCSQCGADLNEDPDH
ECCCCCCCCCCHHCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCC
HHDVTDIRFAGLAGLKAQLEAEQNGEQAE
CCCCCHHHHHHHHCCHHHHHHHCCCCCCC
>Mature Secondary Structure 
ARVEDSPWAIPVAQIASRAGQSKPIDADFPAPSGIGDSIVGIKEGEPVHVSGQFDSIVD
CCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCEEECCCCCEEEECCCHHHHHH
GLIFTGRLVAPFVSECTRCLKPIDEDWPVDVTVFFPYESGQDKANGKGGKNKKDDEIDII
HHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCEEEE
AGEDESEDTYPLLENGAFADIEAMIRDTLVESLPLQPLCRPDCKGLCSQCGADLNEDPDH
ECCCCCCCCCCHHCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCC
HHDVTDIRFAGLAGLKAQLEAEQNGEQAE
CCCCCHHHHHHHHCCHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]