| Definition | Bifidobacterium longum subsp. infantis ATCC 15697, complete genome. |
|---|---|
| Accession | NC_011593 |
| Length | 2,832,748 |
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The map label for this gene is dat [H]
Identifier: 213691297
GI number: 213691297
Start: 444231
End: 445028
Strand: Direct
Name: dat [H]
Synonym: Blon_0384
Alternate gene names: 213691297
Gene position: 444231-445028 (Clockwise)
Preceding gene: 213691291
Following gene: 213691298
Centisome position: 15.68
GC content: 67.17
Gene sequence:
>798_bases ATGGGTGAGTGCGTGATCGGCCCCGGTGCCCGGGCGCGTGTGGATGCGGATGACGGATTCTTCTTCGGCATGGGGGCCTT CGAGACCATCGCGGTATCCGGCGGCGCGCCCGTGTTTCTGGACGACCATCTGACGCGTTTGGGTGAGACGTTGCGATACC TCGGCATCGAGGCGCGTCGCGCCGATCTGGAGACGATGGTTCTCCGCGCATGCGCCGGACTCGGCGCATCGGACGATTCG GCCCTCAAGCTCACGGTCACCGAGCGCAACCGCGTCGTCTCGTTGAGACACAACCCGTATGCCGCGCCGGGGGCGAAGCG CGTCTTCCGCTGCGACTTCGCCGATGTGCGCAGGAACGAATCCTCCCCCCTCGCGCGCATGAAGACGCTGGCGTATGCCG AAAACATCATGGAGAAGCGTCGCGCCCGTGACCGCGCCGTCGACGAGCCGTTGTTCCTCAATACGCGGGGCGAGGTCGCC GAAGGGGCCGTCTCCAATATCTTTGCCGTCATCGGGGGAGACGTCGTGACGCCTCCCGTCTCCTGCGGTCTGCTGCCCGG GGTCATGCGCCATGCCGTGATCGGGTTCACGGGGGCCGTCGAACGCCCGATCATGCCCGACGAGCTGCTTCGGGCCGACG AGGTGTTCCTCACCAACTCCCTGATGGGTGCCATGCCCGTGGCCGGTATCGGCGGCGTGGAATTCGAACCGGGGAGCGTG TCGCGCGACGTGAACGACGCCTATGCCCGCATGGTGGCGCGGACGCGGGCCCGGGCGCAGACGAAGGAGTTCCGGTGA
Upstream 100 bases:
>100_bases GGAATCGCCGGACGGACGGCGTGTCGGCGGCGCACCTACCGTCTTCATGACTGATAGCCTGATTGATGGCAGTGCGAGAC GGGAAAGGGGGCGCTGATCG
Downstream 100 bases:
>100_bases GCGCGCAGGTGTTCAAGCTCAGGACGTTCCGACCGCTTGCCGACATCGTGGAGCGCGTGCGCGGCGAGGAACGCTTCGCG TTCCTGGACTCCTCGATGCC
Product: aminotransferase, class IV
Products: NA
Alternate protein names: D-amino acid aminotransferase; D-amino acid transaminase; DAAT; D-aspartate aminotransferase [H]
Number of amino acids: Translated: 265; Mature: 264
Protein sequence:
>265_residues MGECVIGPGARARVDADDGFFFGMGAFETIAVSGGAPVFLDDHLTRLGETLRYLGIEARRADLETMVLRACAGLGASDDS ALKLTVTERNRVVSLRHNPYAAPGAKRVFRCDFADVRRNESSPLARMKTLAYAENIMEKRRARDRAVDEPLFLNTRGEVA EGAVSNIFAVIGGDVVTPPVSCGLLPGVMRHAVIGFTGAVERPIMPDELLRADEVFLTNSLMGAMPVAGIGGVEFEPGSV SRDVNDAYARMVARTRARAQTKEFR
Sequences:
>Translated_265_residues MGECVIGPGARARVDADDGFFFGMGAFETIAVSGGAPVFLDDHLTRLGETLRYLGIEARRADLETMVLRACAGLGASDDS ALKLTVTERNRVVSLRHNPYAAPGAKRVFRCDFADVRRNESSPLARMKTLAYAENIMEKRRARDRAVDEPLFLNTRGEVA EGAVSNIFAVIGGDVVTPPVSCGLLPGVMRHAVIGFTGAVERPIMPDELLRADEVFLTNSLMGAMPVAGIGGVEFEPGSV SRDVNDAYARMVARTRARAQTKEFR >Mature_264_residues GECVIGPGARARVDADDGFFFGMGAFETIAVSGGAPVFLDDHLTRLGETLRYLGIEARRADLETMVLRACAGLGASDDSA LKLTVTERNRVVSLRHNPYAAPGAKRVFRCDFADVRRNESSPLARMKTLAYAENIMEKRRARDRAVDEPLFLNTRGEVAE GAVSNIFAVIGGDVVTPPVSCGLLPGVMRHAVIGFTGAVERPIMPDELLRADEVFLTNSLMGAMPVAGIGGVEFEPGSVS RDVNDAYARMVARTRARAQTKEFR
Specific function: Acts on the D-isomers of alanine, leucine, aspartate, glutamate, aminobutyrate, norvaline and asparagine. The enzyme transfers an amino group from a substrate D-amino acid to the pyridoxal phosphate cofactor to form pyridoxamine and an alpha- keto acid in
COG id: COG0115
COG function: function code EH; Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family [H]
Homologues:
Organism=Escherichia coli, GI1787338, Length=252, Percent_Identity=25.7936507936508, Blast_Score=65, Evalue=6e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001544 - InterPro: IPR018300 - InterPro: IPR005784 [H]
Pfam domain/function: PF01063 Aminotran_4 [H]
EC number: =2.6.1.21 [H]
Molecular weight: Translated: 28619; Mature: 28488
Theoretical pI: Translated: 6.78; Mature: 6.78
Prosite motif: PS00770 AA_TRANSFER_CLASS_4
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGECVIGPGARARVDADDGFFFGMGAFETIAVSGGAPVFLDDHLTRLGETLRYLGIEARR CCCEEECCCCCEEEECCCCEEEECCCCEEEEECCCCCEEEHHHHHHHHHHHHHHCCHHHH ADLETMVLRACAGLGASDDSALKLTVTERNRVVSLRHNPYAAPGAKRVFRCDFADVRRNE HHHHHHHHHHHHCCCCCCCCEEEEEEECCCEEEEECCCCCCCCCCCCEEECCHHHHHCCC SSPLARMKTLAYAENIMEKRRARDRAVDEPLFLNTRGEVAEGAVSNIFAVIGGDVVTPPV CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCHHHHHHHHHHHHHCCCCCCCCC SCGLLPGVMRHAVIGFTGAVERPIMPDELLRADEVFLTNSLMGAMPVAGIGGVEFEPGSV HHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCEECCCCC SRDVNDAYARMVARTRARAQTKEFR CCCHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure GECVIGPGARARVDADDGFFFGMGAFETIAVSGGAPVFLDDHLTRLGETLRYLGIEARR CCEEECCCCCEEEECCCCEEEECCCCEEEEECCCCCEEEHHHHHHHHHHHHHHCCHHHH ADLETMVLRACAGLGASDDSALKLTVTERNRVVSLRHNPYAAPGAKRVFRCDFADVRRNE HHHHHHHHHHHHCCCCCCCCEEEEEEECCCEEEEECCCCCCCCCCCCEEECCHHHHHCCC SSPLARMKTLAYAENIMEKRRARDRAVDEPLFLNTRGEVAEGAVSNIFAVIGGDVVTPPV CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCHHHHHHHHHHHHHCCCCCCCCC SCGLLPGVMRHAVIGFTGAVERPIMPDELLRADEVFLTNSLMGAMPVAGIGGVEFEPGSV HHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCEECCCCC SRDVNDAYARMVARTRARAQTKEFR CCCHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9003455 [H]