Definition Bifidobacterium longum subsp. infantis ATCC 15697, complete genome.
Accession NC_011593
Length 2,832,748

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The map label for this gene is dat [H]

Identifier: 213691297

GI number: 213691297

Start: 444231

End: 445028

Strand: Direct

Name: dat [H]

Synonym: Blon_0384

Alternate gene names: 213691297

Gene position: 444231-445028 (Clockwise)

Preceding gene: 213691291

Following gene: 213691298

Centisome position: 15.68

GC content: 67.17

Gene sequence:

>798_bases
ATGGGTGAGTGCGTGATCGGCCCCGGTGCCCGGGCGCGTGTGGATGCGGATGACGGATTCTTCTTCGGCATGGGGGCCTT
CGAGACCATCGCGGTATCCGGCGGCGCGCCCGTGTTTCTGGACGACCATCTGACGCGTTTGGGTGAGACGTTGCGATACC
TCGGCATCGAGGCGCGTCGCGCCGATCTGGAGACGATGGTTCTCCGCGCATGCGCCGGACTCGGCGCATCGGACGATTCG
GCCCTCAAGCTCACGGTCACCGAGCGCAACCGCGTCGTCTCGTTGAGACACAACCCGTATGCCGCGCCGGGGGCGAAGCG
CGTCTTCCGCTGCGACTTCGCCGATGTGCGCAGGAACGAATCCTCCCCCCTCGCGCGCATGAAGACGCTGGCGTATGCCG
AAAACATCATGGAGAAGCGTCGCGCCCGTGACCGCGCCGTCGACGAGCCGTTGTTCCTCAATACGCGGGGCGAGGTCGCC
GAAGGGGCCGTCTCCAATATCTTTGCCGTCATCGGGGGAGACGTCGTGACGCCTCCCGTCTCCTGCGGTCTGCTGCCCGG
GGTCATGCGCCATGCCGTGATCGGGTTCACGGGGGCCGTCGAACGCCCGATCATGCCCGACGAGCTGCTTCGGGCCGACG
AGGTGTTCCTCACCAACTCCCTGATGGGTGCCATGCCCGTGGCCGGTATCGGCGGCGTGGAATTCGAACCGGGGAGCGTG
TCGCGCGACGTGAACGACGCCTATGCCCGCATGGTGGCGCGGACGCGGGCCCGGGCGCAGACGAAGGAGTTCCGGTGA

Upstream 100 bases:

>100_bases
GGAATCGCCGGACGGACGGCGTGTCGGCGGCGCACCTACCGTCTTCATGACTGATAGCCTGATTGATGGCAGTGCGAGAC
GGGAAAGGGGGCGCTGATCG

Downstream 100 bases:

>100_bases
GCGCGCAGGTGTTCAAGCTCAGGACGTTCCGACCGCTTGCCGACATCGTGGAGCGCGTGCGCGGCGAGGAACGCTTCGCG
TTCCTGGACTCCTCGATGCC

Product: aminotransferase, class IV

Products: NA

Alternate protein names: D-amino acid aminotransferase; D-amino acid transaminase; DAAT; D-aspartate aminotransferase [H]

Number of amino acids: Translated: 265; Mature: 264

Protein sequence:

>265_residues
MGECVIGPGARARVDADDGFFFGMGAFETIAVSGGAPVFLDDHLTRLGETLRYLGIEARRADLETMVLRACAGLGASDDS
ALKLTVTERNRVVSLRHNPYAAPGAKRVFRCDFADVRRNESSPLARMKTLAYAENIMEKRRARDRAVDEPLFLNTRGEVA
EGAVSNIFAVIGGDVVTPPVSCGLLPGVMRHAVIGFTGAVERPIMPDELLRADEVFLTNSLMGAMPVAGIGGVEFEPGSV
SRDVNDAYARMVARTRARAQTKEFR

Sequences:

>Translated_265_residues
MGECVIGPGARARVDADDGFFFGMGAFETIAVSGGAPVFLDDHLTRLGETLRYLGIEARRADLETMVLRACAGLGASDDS
ALKLTVTERNRVVSLRHNPYAAPGAKRVFRCDFADVRRNESSPLARMKTLAYAENIMEKRRARDRAVDEPLFLNTRGEVA
EGAVSNIFAVIGGDVVTPPVSCGLLPGVMRHAVIGFTGAVERPIMPDELLRADEVFLTNSLMGAMPVAGIGGVEFEPGSV
SRDVNDAYARMVARTRARAQTKEFR
>Mature_264_residues
GECVIGPGARARVDADDGFFFGMGAFETIAVSGGAPVFLDDHLTRLGETLRYLGIEARRADLETMVLRACAGLGASDDSA
LKLTVTERNRVVSLRHNPYAAPGAKRVFRCDFADVRRNESSPLARMKTLAYAENIMEKRRARDRAVDEPLFLNTRGEVAE
GAVSNIFAVIGGDVVTPPVSCGLLPGVMRHAVIGFTGAVERPIMPDELLRADEVFLTNSLMGAMPVAGIGGVEFEPGSVS
RDVNDAYARMVARTRARAQTKEFR

Specific function: Acts on the D-isomers of alanine, leucine, aspartate, glutamate, aminobutyrate, norvaline and asparagine. The enzyme transfers an amino group from a substrate D-amino acid to the pyridoxal phosphate cofactor to form pyridoxamine and an alpha- keto acid in

COG id: COG0115

COG function: function code EH; Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family [H]

Homologues:

Organism=Escherichia coli, GI1787338, Length=252, Percent_Identity=25.7936507936508, Blast_Score=65, Evalue=6e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001544
- InterPro:   IPR018300
- InterPro:   IPR005784 [H]

Pfam domain/function: PF01063 Aminotran_4 [H]

EC number: =2.6.1.21 [H]

Molecular weight: Translated: 28619; Mature: 28488

Theoretical pI: Translated: 6.78; Mature: 6.78

Prosite motif: PS00770 AA_TRANSFER_CLASS_4

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGECVIGPGARARVDADDGFFFGMGAFETIAVSGGAPVFLDDHLTRLGETLRYLGIEARR
CCCEEECCCCCEEEECCCCEEEECCCCEEEEECCCCCEEEHHHHHHHHHHHHHHCCHHHH
ADLETMVLRACAGLGASDDSALKLTVTERNRVVSLRHNPYAAPGAKRVFRCDFADVRRNE
HHHHHHHHHHHHCCCCCCCCEEEEEEECCCEEEEECCCCCCCCCCCCEEECCHHHHHCCC
SSPLARMKTLAYAENIMEKRRARDRAVDEPLFLNTRGEVAEGAVSNIFAVIGGDVVTPPV
CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCHHHHHHHHHHHHHCCCCCCCCC
SCGLLPGVMRHAVIGFTGAVERPIMPDELLRADEVFLTNSLMGAMPVAGIGGVEFEPGSV
HHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCEECCCCC
SRDVNDAYARMVARTRARAQTKEFR
CCCHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
GECVIGPGARARVDADDGFFFGMGAFETIAVSGGAPVFLDDHLTRLGETLRYLGIEARR
CCEEECCCCCEEEECCCCEEEECCCCEEEEECCCCCEEEHHHHHHHHHHHHHHCCHHHH
ADLETMVLRACAGLGASDDSALKLTVTERNRVVSLRHNPYAAPGAKRVFRCDFADVRRNE
HHHHHHHHHHHHCCCCCCCCEEEEEEECCCEEEEECCCCCCCCCCCCEEECCHHHHHCCC
SSPLARMKTLAYAENIMEKRRARDRAVDEPLFLNTRGEVAEGAVSNIFAVIGGDVVTPPV
CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCHHHHHHHHHHHHHCCCCCCCCC
SCGLLPGVMRHAVIGFTGAVERPIMPDELLRADEVFLTNSLMGAMPVAGIGGVEFEPGSV
HHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCEECCCCC
SRDVNDAYARMVARTRARAQTKEFR
CCCHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9003455 [H]