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The map label for this gene is pepR1 [H]

Identifier: 213691287

GI number: 213691287

Start: 434095

End: 435081

Strand: Direct

Name: pepR1 [H]

Synonym: Blon_0374

Alternate gene names: 213691287

Gene position: 434095-435081 (Clockwise)

Preceding gene: 213691286

Following gene: 213691288

Centisome position: 15.32

GC content: 55.83

Gene sequence:

>987_bases
ATGGTTACTGCAAGGGATGTGGCAAAGCGCGCCGGGGTGTCTCAGGCCACGGTGTCGTATGTGATGAGCGGTAGCAGGCC
CATTTCCGAAGCCACCAAAAAACGGGTGCGCAAGGCCATGGATGAGTTGGGGTATGTTCCCAATATCAATGCGCGATCGT
TGGCGGGTGGCAAGGTCGGTGTCATCGGTGTGCTGGTGCATATGGATGAGAATACCGATTTGGCCGAGCTTCGCCCGTTC
CTGGTGGTAATCATGGAGGAGGCGAGAAAGCGGGGGTCTAGTGTGATGCTCGTTCCGGCCGACGAGGGGATTGAGGGACT
GTGCCGTATGGTGCGTCAAGGCGTGGTCGATGGCGTCTTGGTGTTCGACGTCGAGTGGCATGATGAACGCCTGCCTGAGA
TAGCGCGATTGGATATTCCCGTTGTGCTGGTGGGTACGCCAGAAAACGCACATGGCCTGCCGTGCGTTGATGTGGATTAT
CGTCGAGTGGCGCAGATGGCCGTCAATCGTTTGGCGGAACGAGGGGCGCAGCGGATGGTCCTTGTTGGGGACTGGGGAAG
AAGTCTCGACCGTTATGCGTTTGCTAAGTTCTTCGCCAGCGAATCTCGTGTGGTGGCTCAAGTGCTGGGCATGGAATATG
AGATATTCATCCCGCGTGAAAAAGGATGGAGGGGCATCTGGGCGATGAAGGATGAATTGAAGCGAATGGCTCAATGCCAT
GGTGGTATTGCGGTGCGCACCCCTCATGCGTTAGATTCGCTGCTGCAGCTTTGTGTGGAAATGCAGATTCAGCCTGGACG
TGATTTTTCCCTGGTCGCGGTGTATGTGGATGGTCATGACGAAGAGTTGCGCGTGCCGGTGGATAATGTGGATCCAGTGC
CGCAGTCCGTCTCCAAAGCCGCCATGGGGCTACTGTTCGATCGGATCGATGGACATAAAACTGGTGAAAGATTGCTGGTT
TCTCCGCATATCACCATCCGTAGCTAA

Upstream 100 bases:

>100_bases
CATCGGTCGGTATGCATATGTTTATACACTTCAATATGCTGGAGGGTGAATGTTTCATGCCTGATCTACGGTGACGGGCG
GCAAGCGACGAGGTGTATGG

Downstream 100 bases:

>100_bases
GGAGTATGTCCGATTCTCGGCCTCGTATGGTTCTTGACGTCGCGTAGTTTATGCGCATCAACACGCCGGTGTTGCGTGCG
TCGGATTCAATGATATATTC

Product: regulatory protein, LacI

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 328; Mature: 328

Protein sequence:

>328_residues
MVTARDVAKRAGVSQATVSYVMSGSRPISEATKKRVRKAMDELGYVPNINARSLAGGKVGVIGVLVHMDENTDLAELRPF
LVVIMEEARKRGSSVMLVPADEGIEGLCRMVRQGVVDGVLVFDVEWHDERLPEIARLDIPVVLVGTPENAHGLPCVDVDY
RRVAQMAVNRLAERGAQRMVLVGDWGRSLDRYAFAKFFASESRVVAQVLGMEYEIFIPREKGWRGIWAMKDELKRMAQCH
GGIAVRTPHALDSLLQLCVEMQIQPGRDFSLVAVYVDGHDEELRVPVDNVDPVPQSVSKAAMGLLFDRIDGHKTGERLLV
SPHITIRS

Sequences:

>Translated_328_residues
MVTARDVAKRAGVSQATVSYVMSGSRPISEATKKRVRKAMDELGYVPNINARSLAGGKVGVIGVLVHMDENTDLAELRPF
LVVIMEEARKRGSSVMLVPADEGIEGLCRMVRQGVVDGVLVFDVEWHDERLPEIARLDIPVVLVGTPENAHGLPCVDVDY
RRVAQMAVNRLAERGAQRMVLVGDWGRSLDRYAFAKFFASESRVVAQVLGMEYEIFIPREKGWRGIWAMKDELKRMAQCH
GGIAVRTPHALDSLLQLCVEMQIQPGRDFSLVAVYVDGHDEELRVPVDNVDPVPQSVSKAAMGLLFDRIDGHKTGERLLV
SPHITIRS
>Mature_328_residues
MVTARDVAKRAGVSQATVSYVMSGSRPISEATKKRVRKAMDELGYVPNINARSLAGGKVGVIGVLVHMDENTDLAELRPF
LVVIMEEARKRGSSVMLVPADEGIEGLCRMVRQGVVDGVLVFDVEWHDERLPEIARLDIPVVLVGTPENAHGLPCVDVDY
RRVAQMAVNRLAERGAQRMVLVGDWGRSLDRYAFAKFFASESRVVAQVLGMEYEIFIPREKGWRGIWAMKDELKRMAQCH
GGIAVRTPHALDSLLQLCVEMQIQPGRDFSLVAVYVDGHDEELRVPVDNVDPVPQSVSKAAMGLLFDRIDGHKTGERLLV
SPHITIRS

Specific function: Transcriptional regulator of the pepQ gene for prolidase [H]

COG id: COG1609

COG function: function code K; Transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH lacI-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1787906, Length=195, Percent_Identity=34.8717948717949, Blast_Score=80, Evalue=1e-16,
Organism=Escherichia coli, GI1787580, Length=338, Percent_Identity=23.9644970414201, Blast_Score=71, Evalue=8e-14,
Organism=Escherichia coli, GI1787948, Length=325, Percent_Identity=28.3076923076923, Blast_Score=71, Evalue=1e-13,
Organism=Escherichia coli, GI1790194, Length=130, Percent_Identity=34.6153846153846, Blast_Score=66, Evalue=3e-12,
Organism=Escherichia coli, GI1788474, Length=185, Percent_Identity=32.972972972973, Blast_Score=64, Evalue=9e-12,
Organism=Escherichia coli, GI1789068, Length=66, Percent_Identity=50, Blast_Score=64, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000843
- InterPro:   IPR010982
- InterPro:   IPR001761 [H]

Pfam domain/function: PF00356 LacI; PF00532 Peripla_BP_1 [H]

EC number: NA

Molecular weight: Translated: 36333; Mature: 36333

Theoretical pI: Translated: 6.95; Mature: 6.95

Prosite motif: PS50932 HTH_LACI_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVTARDVAKRAGVSQATVSYVMSGSRPISEATKKRVRKAMDELGYVPNINARSLAGGKVG
CCCHHHHHHHCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEE
VIGVLVHMDENTDLAELRPFLVVIMEEARKRGSSVMLVPADEGIEGLCRMVRQGVVDGVL
EEEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHCCCCEE
VFDVEWHDERLPEIARLDIPVVLVGTPENAHGLPCVDVDYRRVAQMAVNRLAERGAQRMV
EEEEECCHHHCCHHHHCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEE
LVGDWGRSLDRYAFAKFFASESRVVAQVLGMEYEIFIPREKGWRGIWAMKDELKRMAQCH
EEECCCCHHHHHHHHHHHHCCHHHHHHHHCCEEEEEEECCCCCCCHHHHHHHHHHHHHHC
GGIAVRTPHALDSLLQLCVEMQIQPGRDFSLVAVYVDGHDEELRVPVDNVDPVPQSVSKA
CCEEEECCHHHHHHHHHHHHHCCCCCCCEEEEEEEECCCCCEEECCCCCCCCCHHHHHHH
AMGLLFDRIDGHKTGERLLVSPHITIRS
HHHHHHHHCCCCCCCCEEEEECCEEECC
>Mature Secondary Structure
MVTARDVAKRAGVSQATVSYVMSGSRPISEATKKRVRKAMDELGYVPNINARSLAGGKVG
CCCHHHHHHHCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEE
VIGVLVHMDENTDLAELRPFLVVIMEEARKRGSSVMLVPADEGIEGLCRMVRQGVVDGVL
EEEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHCCCCEE
VFDVEWHDERLPEIARLDIPVVLVGTPENAHGLPCVDVDYRRVAQMAVNRLAERGAQRMV
EEEEECCHHHCCHHHHCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEE
LVGDWGRSLDRYAFAKFFASESRVVAQVLGMEYEIFIPREKGWRGIWAMKDELKRMAQCH
EEECCCCHHHHHHHHHHHHCCHHHHHHHHCCEEEEEEECCCCCCCHHHHHHHHHHHHHHC
GGIAVRTPHALDSLLQLCVEMQIQPGRDFSLVAVYVDGHDEELRVPVDNVDPVPQSVSKA
CCEEEECCHHHHHHHHHHHHHCCCCCCCEEEEEEEECCCCCEEECCCCCCCCCHHHHHHH
AMGLLFDRIDGHKTGERLLVSPHITIRS
HHHHHHHHCCCCCCCCEEEEECCEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA