| Definition | Bifidobacterium longum subsp. infantis ATCC 15697, complete genome. |
|---|---|
| Accession | NC_011593 |
| Length | 2,832,748 |
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The map label for this gene is yegV [H]
Identifier: 213691253
GI number: 213691253
Start: 389616
End: 390632
Strand: Reverse
Name: yegV [H]
Synonym: Blon_0337
Alternate gene names: 213691253
Gene position: 390632-389616 (Counterclockwise)
Preceding gene: 213691256
Following gene: 213691252
Centisome position: 13.79
GC content: 63.23
Gene sequence:
>1017_bases ATGTTGAATCTCAGGCGAGGTATCGGCACTCACGAGCCCAGCGTGATTTCACTGGGGCAAGTCTGGGTGGACATTATGCT CAATGTGGACGAGGTGCCGGCACAGGGCGGATTCGCCGTGGCCGATCATCCGAAGCCTTCCATTGGCGGCAGCTATCGCG TGCTGCAGGCGGCCAGCCGCATGGGCGTGCCGACCGAGCACGCCGGCATTCTGGGCAACGGCCTGTGGGCGCATTTCATC CGCCAGTCATTCCAAGACAACGGCATTACGCATATCGGCCAGGATCGTCTTGATGAGGATTCCGGTTTCCGCGTGGTGCT GAGCTCCGGCGCGCCGAAGAAGACGTTCATCGCTTCCTATGGCGCCGAGGCTCATGGCGACGCGGACACGTTCAACACGC TGGAGCCGCAGCCCAAAGACGTGGTGCACATCAGCGGCAACACACTGATGGACCATACGGCCACCGGCGTGGACGGATTC CTACTCAAGGCCGGTACCGACCCGGCTGCACGCGACTACACGCTGGTGATCAATCCCACCAATACGTTGCGTCTGGTCAA CGACCATATGCTTGAGGACCTGGTGCTCGCACGCCCGGTCTGGTCCTGCAACCGTCAGGAGGCCATGACGCTGGCCGAGC GCCTGGGCGCGCCGATCGACGACAGCAAGGTCACCATCGGCGGTGGACTCGACGACTTCATGCACCAGTTGTGTGACGGC TTGGGCACTACACTGCGCGCGCCGCTGGTGGTGCGTGTCGGCGCCCGCGGCGCTTGGATTCGTGAGCCAGGTGGCGAGAC GATTCATATCGAGGGATACCCGACCAAGGCCGTACACACCCGTTCGGCGGGCGGTTGCCACACCGGCGTGATGTGCGCGA TGCTGGCAAAGGGCCATAGTCTGGCCGAATCGGTAAAGATCGCCAACGCGGCGGCATCCATCGCCATCCAGCGCAGCCTC AACGGCGTGCCGCAATGCCCCGATTACGACGAGGCCATCGCGCTGATCGGCGAATAG
Upstream 100 bases:
>100_bases CTTGCCTATTCCGCATCCAGCAAACTCTCATATAATCTCGGTATAAGAGATGGCAAGGGACGAAGGGGTCCTCGTGCAAC TTACGACGAAGGAGGCTGTC
Downstream 100 bases:
>100_bases TTTCCGGACGATTGAGTGGATTTCCTCATCTGGGGGAATCCACGATCGGCTCCCTTCAGTCCACGATCGGCTCCCTTCAG TCCGCTTCGCGGCCAGCTCC
Product: PfkB domain protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 338; Mature: 338
Protein sequence:
>338_residues MLNLRRGIGTHEPSVISLGQVWVDIMLNVDEVPAQGGFAVADHPKPSIGGSYRVLQAASRMGVPTEHAGILGNGLWAHFI RQSFQDNGITHIGQDRLDEDSGFRVVLSSGAPKKTFIASYGAEAHGDADTFNTLEPQPKDVVHISGNTLMDHTATGVDGF LLKAGTDPAARDYTLVINPTNTLRLVNDHMLEDLVLARPVWSCNRQEAMTLAERLGAPIDDSKVTIGGGLDDFMHQLCDG LGTTLRAPLVVRVGARGAWIREPGGETIHIEGYPTKAVHTRSAGGCHTGVMCAMLAKGHSLAESVKIANAAASIAIQRSL NGVPQCPDYDEAIALIGE
Sequences:
>Translated_338_residues MLNLRRGIGTHEPSVISLGQVWVDIMLNVDEVPAQGGFAVADHPKPSIGGSYRVLQAASRMGVPTEHAGILGNGLWAHFI RQSFQDNGITHIGQDRLDEDSGFRVVLSSGAPKKTFIASYGAEAHGDADTFNTLEPQPKDVVHISGNTLMDHTATGVDGF LLKAGTDPAARDYTLVINPTNTLRLVNDHMLEDLVLARPVWSCNRQEAMTLAERLGAPIDDSKVTIGGGLDDFMHQLCDG LGTTLRAPLVVRVGARGAWIREPGGETIHIEGYPTKAVHTRSAGGCHTGVMCAMLAKGHSLAESVKIANAAASIAIQRSL NGVPQCPDYDEAIALIGE >Mature_338_residues MLNLRRGIGTHEPSVISLGQVWVDIMLNVDEVPAQGGFAVADHPKPSIGGSYRVLQAASRMGVPTEHAGILGNGLWAHFI RQSFQDNGITHIGQDRLDEDSGFRVVLSSGAPKKTFIASYGAEAHGDADTFNTLEPQPKDVVHISGNTLMDHTATGVDGF LLKAGTDPAARDYTLVINPTNTLRLVNDHMLEDLVLARPVWSCNRQEAMTLAERLGAPIDDSKVTIGGGLDDFMHQLCDG LGTTLRAPLVVRVGARGAWIREPGGETIHIEGYPTKAVHTRSAGGCHTGVMCAMLAKGHSLAESVKIANAAASIAIQRSL NGVPQCPDYDEAIALIGE
Specific function: Unknown
COG id: COG0524
COG function: function code G; Sugar kinases, ribokinase family
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the carbohydrate kinase pfkB family [H]
Homologues:
Organism=Escherichia coli, GI1788417, Length=308, Percent_Identity=26.2987012987013, Blast_Score=91, Evalue=2e-19,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011611 - InterPro: IPR002173 - InterPro: IPR002139 [H]
Pfam domain/function: PF00294 PfkB [H]
EC number: NA
Molecular weight: Translated: 35947; Mature: 35947
Theoretical pI: Translated: 6.00; Mature: 6.00
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLNLRRGIGTHEPSVISLGQVWVDIMLNVDEVPAQGGFAVADHPKPSIGGSYRVLQAASR CCCCCCCCCCCCCCEEEHHHHHHHHHCCCHHCCCCCCEEECCCCCCCCCCCHHHHHHHHH MGVPTEHAGILGNGLWAHFIRQSFQDNGITHIGQDRLDEDSGFRVVLSSGAPKKTFIASY CCCCCCCCCHHCCHHHHHHHHHHHHCCCCCCCCHHCCCCCCCCEEEEECCCCCHHEEEEC GAEAHGDADTFNTLEPQPKDVVHISGNTLMDHTATGVDGFLLKAGTDPAARDYTLVINPT CCCCCCCCCCCCCCCCCCCCEEEECCCEEECCCCCCCCCEEEECCCCCCCCCEEEEECCC NTLRLVNDHMLEDLVLARPVWSCNRQEAMTLAERLGAPIDDSKVTIGGGLDDFMHQLCDG CCEEEHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCEEEECCCHHHHHHHHHHH LGTTLRAPLVVRVGARGAWIREPGGETIHIEGYPTKAVHTRSAGGCHTGVMCAMLAKGHS HCHHHCCCEEEEECCCCCEEECCCCCEEEECCCCCHHEECCCCCCCHHHHHHHHHHCCHH LAESVKIANAAASIAIQRSLNGVPQCPDYDEAIALIGE HHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHEEECCC >Mature Secondary Structure MLNLRRGIGTHEPSVISLGQVWVDIMLNVDEVPAQGGFAVADHPKPSIGGSYRVLQAASR CCCCCCCCCCCCCCEEEHHHHHHHHHCCCHHCCCCCCEEECCCCCCCCCCCHHHHHHHHH MGVPTEHAGILGNGLWAHFIRQSFQDNGITHIGQDRLDEDSGFRVVLSSGAPKKTFIASY CCCCCCCCCHHCCHHHHHHHHHHHHCCCCCCCCHHCCCCCCCCEEEEECCCCCHHEEEEC GAEAHGDADTFNTLEPQPKDVVHISGNTLMDHTATGVDGFLLKAGTDPAARDYTLVINPT CCCCCCCCCCCCCCCCCCCCEEEECCCEEECCCCCCCCCEEEECCCCCCCCCEEEEECCC NTLRLVNDHMLEDLVLARPVWSCNRQEAMTLAERLGAPIDDSKVTIGGGLDDFMHQLCDG CCEEEHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCEEEECCCHHHHHHHHHHH LGTTLRAPLVVRVGARGAWIREPGGETIHIEGYPTKAVHTRSAGGCHTGVMCAMLAKGHS HCHHHCCCEEEEECCCCCEEECCCCCEEEECCCCCHHEECCCCCCCHHHHHHHHHHCCHH LAESVKIANAAASIAIQRSLNGVPQCPDYDEAIALIGE HHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9097040; 9278503 [H]