| Definition | Bifidobacterium longum subsp. infantis ATCC 15697, complete genome. |
|---|---|
| Accession | NC_011593 |
| Length | 2,832,748 |
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The map label for this gene is yxiO [H]
Identifier: 213691252
GI number: 213691252
Start: 388093
End: 389370
Strand: Reverse
Name: yxiO [H]
Synonym: Blon_0336
Alternate gene names: 213691252
Gene position: 389370-388093 (Counterclockwise)
Preceding gene: 213691253
Following gene: 213691248
Centisome position: 13.75
GC content: 60.41
Gene sequence:
>1278_bases ATGACTGATCCCACGAATGTCCACGAACCGGTGCCGCAAAGCGCCAAACTGACCGCCCGCGAAAAGAAGTGGATCATCTA CGACGTCGGCAACTCGGCATTCGTGCTGCTGTCCACCGCCGTCATCCCCATTTACGCCAAATCGCTGATGCCGGCGGACG GCAACATCGTGTCCGCCTGGGGCTACGCGCAAACCATTGCCTCCTTGGTCATAGCGCTGCTCATGCCGTTGCTCGGCTCC ATCGCCGACGTGCAAGGCATGAAAATCAAGTTCTTCCTGGGCTTCTTCGGCACCGGCGTGGTCACCTGCTGCGCAATGGC CTTGCCCCTGACCTGGCTGCCGTTCCTGGTCGTCTACATTCTGGCGACCATCGGCCTTAACGGCTCGCTGACGTTCTATG ATTCGATGCTTATCGACACCACCTCGAACGAGCGCATGGACAAGGTCTCCTCGCACGGCTACGGCTGGGGCTACATCGGC TCCACCGTGCCGTTCATCTTCTGCATCGTGCTGATCTTCGGCGGCCCGTCGCTCTTCGGCTGGTCCACGGTGGCTTGCAC GCGCGCCTCATTCATCATCACCGCCATCTGGTGGGTGGCATTCACCATCCCGCTGCTTACCAGCTACCGCCAAGTGCACT ATCGCGCCACCCGTGACCAGCTGGGCTCGGCCATGCGCGGCACGTTCAGCGAACTGGCGGGCACGTTCGGCAAAATCGTG AAGAACAAGCCGTTGTGGATGTTCATGATCGCGTTCTTCTTCTACATCGATGCCGTGAACACGGTGATTTCGATGAGTAC CTCCTACGGTGCCGAGCTTGGCATCGACTCCACCCAGCTGGTGGTGGCACTGCTCGTCACGCAGTTCGTGGCCTTCCCCT GCGCGATTCTCTACGGCCGCCTGGCGGCGCGATTCGGTTGCAAGGCGATGATCACGGCGGCGGTCGTAGCATACATGTGC ATCGTGCTCTTCGCCGCGTTCTTCATGAAATCGGCCGTGGAGTTCTGGATTCTGGCGATTCTGGTCGGCATGTTCCAAGG CGGCATCCAGGCGCTCTCCCGCTCGTACTACGGCAAGATCATCCCCAAGGATCACGCCAACGAGTACTACGGCTTCTACG ATATCTTCGGCAAGACCGCCTCAATCATCGGCACCTTCCTGGTGGCCACCACCACGTCCCTGACCGGCAACGCCTCGTTC GGCGTGCTGTCCATCGCAATCCTGCTCGTCGCGGCGCTGGTCTTCCTGCTGCTGCAGAAAGACCCGACGCAAGCGTAA
Upstream 100 bases:
>100_bases GGGGCCCCGGCATTATTCACCCGCCGTTCAACCGGAATGGCCCCCCACCCTAGTCCGCGCTTCTACGATAGATTGAGTTG AATACCGTCGAGGAGTGCAT
Downstream 100 bases:
>100_bases TATCATCCATCAATCAGCAACAGGAACGCCGAAGCAGCGATAAAACGGCAGACCCTACCGCCCGAGCCGCGACCTGAAAC AATTTAGCCCTGCACAACGC
Product: major facilitator superfamily MFS_1
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 425; Mature: 424
Protein sequence:
>425_residues MTDPTNVHEPVPQSAKLTAREKKWIIYDVGNSAFVLLSTAVIPIYAKSLMPADGNIVSAWGYAQTIASLVIALLMPLLGS IADVQGMKIKFFLGFFGTGVVTCCAMALPLTWLPFLVVYILATIGLNGSLTFYDSMLIDTTSNERMDKVSSHGYGWGYIG STVPFIFCIVLIFGGPSLFGWSTVACTRASFIITAIWWVAFTIPLLTSYRQVHYRATRDQLGSAMRGTFSELAGTFGKIV KNKPLWMFMIAFFFYIDAVNTVISMSTSYGAELGIDSTQLVVALLVTQFVAFPCAILYGRLAARFGCKAMITAAVVAYMC IVLFAAFFMKSAVEFWILAILVGMFQGGIQALSRSYYGKIIPKDHANEYYGFYDIFGKTASIIGTFLVATTTSLTGNASF GVLSIAILLVAALVFLLLQKDPTQA
Sequences:
>Translated_425_residues MTDPTNVHEPVPQSAKLTAREKKWIIYDVGNSAFVLLSTAVIPIYAKSLMPADGNIVSAWGYAQTIASLVIALLMPLLGS IADVQGMKIKFFLGFFGTGVVTCCAMALPLTWLPFLVVYILATIGLNGSLTFYDSMLIDTTSNERMDKVSSHGYGWGYIG STVPFIFCIVLIFGGPSLFGWSTVACTRASFIITAIWWVAFTIPLLTSYRQVHYRATRDQLGSAMRGTFSELAGTFGKIV KNKPLWMFMIAFFFYIDAVNTVISMSTSYGAELGIDSTQLVVALLVTQFVAFPCAILYGRLAARFGCKAMITAAVVAYMC IVLFAAFFMKSAVEFWILAILVGMFQGGIQALSRSYYGKIIPKDHANEYYGFYDIFGKTASIIGTFLVATTTSLTGNASF GVLSIAILLVAALVFLLLQKDPTQA >Mature_424_residues TDPTNVHEPVPQSAKLTAREKKWIIYDVGNSAFVLLSTAVIPIYAKSLMPADGNIVSAWGYAQTIASLVIALLMPLLGSI ADVQGMKIKFFLGFFGTGVVTCCAMALPLTWLPFLVVYILATIGLNGSLTFYDSMLIDTTSNERMDKVSSHGYGWGYIGS TVPFIFCIVLIFGGPSLFGWSTVACTRASFIITAIWWVAFTIPLLTSYRQVHYRATRDQLGSAMRGTFSELAGTFGKIVK NKPLWMFMIAFFFYIDAVNTVISMSTSYGAELGIDSTQLVVALLVTQFVAFPCAILYGRLAARFGCKAMITAAVVAYMCI VLFAAFFMKSAVEFWILAILVGMFQGGIQALSRSYYGKIIPKDHANEYYGFYDIFGKTASIIGTFLVATTTSLTGNASFG VLSIAILLVAALVFLLLQKDPTQA
Specific function: Unknown
COG id: COG2270
COG function: function code R; Permeases of the major facilitator superfamily
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020846 - InterPro: IPR016196 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 46293; Mature: 46162
Theoretical pI: Translated: 8.76; Mature: 8.76
Prosite motif: PS50850 MFS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDPTNVHEPVPQSAKLTAREKKWIIYDVGNSAFVLLSTAVIPIYAKSLMPADGNIVSAW CCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCCEEEHH GYAQTIASLVIALLMPLLGSIADVQGMKIKFFLGFFGTGVVTCCAMALPLTWLPFLVVYI HHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LATIGLNGSLTFYDSMLIDTTSNERMDKVSSHGYGWGYIGSTVPFIFCIVLIFGGPSLFG HHHHCCCCCEEEEHHEEEECCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCCC WSTVACTRASFIITAIWWVAFTIPLLTSYRQVHYRATRDQLGSAMRGTFSELAGTFGKIV CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KNKPLWMFMIAFFFYIDAVNTVISMSTSYGAELGIDSTQLVVALLVTQFVAFPCAILYGR CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH LAARFGCKAMITAAVVAYMCIVLFAAFFMKSAVEFWILAILVGMFQGGIQALSRSYYGKI HHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC IPKDHANEYYGFYDIFGKTASIIGTFLVATTTSLTGNASFGVLSIAILLVAALVFLLLQK CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCC DPTQA CCCCC >Mature Secondary Structure TDPTNVHEPVPQSAKLTAREKKWIIYDVGNSAFVLLSTAVIPIYAKSLMPADGNIVSAW CCCCCCCCCCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCCEEEHH GYAQTIASLVIALLMPLLGSIADVQGMKIKFFLGFFGTGVVTCCAMALPLTWLPFLVVYI HHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LATIGLNGSLTFYDSMLIDTTSNERMDKVSSHGYGWGYIGSTVPFIFCIVLIFGGPSLFG HHHHCCCCCEEEEHHEEEECCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCCC WSTVACTRASFIITAIWWVAFTIPLLTSYRQVHYRATRDQLGSAMRGTFSELAGTFGKIV CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KNKPLWMFMIAFFFYIDAVNTVISMSTSYGAELGIDSTQLVVALLVTQFVAFPCAILYGR CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH LAARFGCKAMITAAVVAYMCIVLFAAFFMKSAVEFWILAILVGMFQGGIQALSRSYYGKI HHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC IPKDHANEYYGFYDIFGKTASIIGTFLVATTTSLTGNASFGVLSIAILLVAALVFLLLQK CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCC DPTQA CCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8969509; 9384377 [H]