| Definition | Bifidobacterium longum subsp. infantis ATCC 15697, complete genome. |
|---|---|
| Accession | NC_011593 |
| Length | 2,832,748 |
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The map label for this gene is 213691230
Identifier: 213691230
GI number: 213691230
Start: 363577
End: 364647
Strand: Direct
Name: 213691230
Synonym: Blon_0313
Alternate gene names: NA
Gene position: 363577-364647 (Clockwise)
Preceding gene: 213691228
Following gene: 213691231
Centisome position: 12.83
GC content: 61.72
Gene sequence:
>1071_bases ATGAGTGCTGAAGAACAGACTACAAGACCGGATAAGGGCGCCAAGCGTCCATCCCGTCATGCCAAGATCATGCGTGGAGT GGTGACGCCTATCTTCGGCCTATTGGCCGTGGCGGCTGTGGTGTTGGGGTACATGAATGCCACGATATGGAAGCCCTCCA CTGAAATCACCGCTTCCGCAACCATGAGCGGCTCCCGGTATGCCGTCACTGATCCGAATGTGCTGACCTTGTTGGATCAG AACGCCACGATAACCGTGGACTCGGGATCCTCTCAGGACGAGGCGTGCGTGGCGTTGGGGCCGGCCAAGGATGTTGCCGG ATGGGTCGCGTCCGAGAAGTCCTATACCCGCATCACCGGATTGGCGTCATGGAGCGAGCTGAGCACCCGGAAGGGAAGCA GCACGAGTCAGGGAGCGCCTACCAGTGCCGATGGCGCGGTGTCGTTCAAGGATTCCGATATGTGGACTGACGTGAGATGC GGCACTGGGTCCGTTTCGCTGGAGAGCAAGAAGACCGGCGCCTCGACGGTAGCCATTGTGGATCTGGGCGAAAATGTCAC CAACGCCAAGGTGCAGCTGCACTGGGTGCGCTCCGCAGTGCCGGACTTTGCGATGCCGTTCTATCTGTCCGGCGGATTGC TGGCCGTGCTGGCCGTACTGTGCGCCTCCGTGTTCGCCATGCCGCCGCATAAGCGCCGCAAGCGCATGGTGGAAGGCACG GCAAGCGCCGTAATTGAGGAAGAGGCGCCCGCCAGCATCGCAGTGTCCGGGAAGCCGGATGGGGCAAGTCGACGTAATCG TCGCCGCCACGCCACGCATCAGCGTTCGGGCCGTGCGTCCTCGCAATCTGAAGCCACCGAAACACCGGTTATCATCGACC CAAGTTCGCGTAACCTGGTCGCCGACCAGCAGACCGGTGCCGAGAGCGGCGCTGAGACCGGCTTCAGCGCCGGCGATAAC GAAGCGACTTCGGTAATCACCCCTGACGAACTGCAGGCCTACTTCTCCCGCTTGGCCCAAGAGGTCAATACCGGAGACGA CTCGGCCGATGCCGGACAGGAGGAAAGCTGA
Upstream 100 bases:
>100_bases GACTTAACAGACTTACGCATGGCACACCACCCTACTGGTAAACCTTGATTTTCTGCGCTCCTAGGTAATAAACAGGTGAA GATTGTAGAATGGTTGAGTT
Downstream 100 bases:
>100_bases TGAACAAGCGATGGAACAAACTGTGTGTGGCCGCCCTCGCCTGCGTGGCGTTGGTCGTGCCGTTGACCGCCTGTGAAGGC CGGCTGCCGACGCCGGCTGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 356; Mature: 355
Protein sequence:
>356_residues MSAEEQTTRPDKGAKRPSRHAKIMRGVVTPIFGLLAVAAVVLGYMNATIWKPSTEITASATMSGSRYAVTDPNVLTLLDQ NATITVDSGSSQDEACVALGPAKDVAGWVASEKSYTRITGLASWSELSTRKGSSTSQGAPTSADGAVSFKDSDMWTDVRC GTGSVSLESKKTGASTVAIVDLGENVTNAKVQLHWVRSAVPDFAMPFYLSGGLLAVLAVLCASVFAMPPHKRRKRMVEGT ASAVIEEEAPASIAVSGKPDGASRRNRRRHATHQRSGRASSQSEATETPVIIDPSSRNLVADQQTGAESGAETGFSAGDN EATSVITPDELQAYFSRLAQEVNTGDDSADAGQEES
Sequences:
>Translated_356_residues MSAEEQTTRPDKGAKRPSRHAKIMRGVVTPIFGLLAVAAVVLGYMNATIWKPSTEITASATMSGSRYAVTDPNVLTLLDQ NATITVDSGSSQDEACVALGPAKDVAGWVASEKSYTRITGLASWSELSTRKGSSTSQGAPTSADGAVSFKDSDMWTDVRC GTGSVSLESKKTGASTVAIVDLGENVTNAKVQLHWVRSAVPDFAMPFYLSGGLLAVLAVLCASVFAMPPHKRRKRMVEGT ASAVIEEEAPASIAVSGKPDGASRRNRRRHATHQRSGRASSQSEATETPVIIDPSSRNLVADQQTGAESGAETGFSAGDN EATSVITPDELQAYFSRLAQEVNTGDDSADAGQEES >Mature_355_residues SAEEQTTRPDKGAKRPSRHAKIMRGVVTPIFGLLAVAAVVLGYMNATIWKPSTEITASATMSGSRYAVTDPNVLTLLDQN ATITVDSGSSQDEACVALGPAKDVAGWVASEKSYTRITGLASWSELSTRKGSSTSQGAPTSADGAVSFKDSDMWTDVRCG TGSVSLESKKTGASTVAIVDLGENVTNAKVQLHWVRSAVPDFAMPFYLSGGLLAVLAVLCASVFAMPPHKRRKRMVEGTA SAVIEEEAPASIAVSGKPDGASRRNRRRHATHQRSGRASSQSEATETPVIIDPSSRNLVADQQTGAESGAETGFSAGDNE ATSVITPDELQAYFSRLAQEVNTGDDSADAGQEES
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37357; Mature: 37226
Theoretical pI: Translated: 5.46; Mature: 5.46
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSAEEQTTRPDKGAKRPSRHAKIMRGVVTPIFGLLAVAAVVLGYMNATIWKPSTEITASA CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEECCCCCEEEEE TMSGSRYAVTDPNVLTLLDQNATITVDSGSSQDEACVALGPAKDVAGWVASEKSYTRITG ECCCCEEEECCCCEEEEECCCCEEEECCCCCCCCEEEEECCHHHHHHHHHCCCCCEEEEC LASWSELSTRKGSSTSQGAPTSADGAVSFKDSDMWTDVRCGTGSVSLESKKTGASTVAIV CCCHHHHHHCCCCCCCCCCCCCCCCEEEECCCCCEEEEECCCCCEEECCCCCCCCEEEEE DLGENVTNAKVQLHWVRSAVPDFAMPFYLSGGLLAVLAVLCASVFAMPPHKRRKRMVEGT ECCCCCCCCEEEEEEHHHCCCCHHHHHHHCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHH ASAVIEEEAPASIAVSGKPDGASRRNRRRHATHQRSGRASSQSEATETPVIIDPSSRNLV HHHHHHCCCCCEEEECCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCEEECCCCCCEE ADQQTGAESGAETGFSAGDNEATSVITPDELQAYFSRLAQEVNTGDDSADAGQEES ECCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCC >Mature Secondary Structure SAEEQTTRPDKGAKRPSRHAKIMRGVVTPIFGLLAVAAVVLGYMNATIWKPSTEITASA CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEECCCCCEEEEE TMSGSRYAVTDPNVLTLLDQNATITVDSGSSQDEACVALGPAKDVAGWVASEKSYTRITG ECCCCEEEECCCCEEEEECCCCEEEECCCCCCCCEEEEECCHHHHHHHHHCCCCCEEEEC LASWSELSTRKGSSTSQGAPTSADGAVSFKDSDMWTDVRCGTGSVSLESKKTGASTVAIV CCCHHHHHHCCCCCCCCCCCCCCCCEEEECCCCCEEEEECCCCCEEECCCCCCCCEEEEE DLGENVTNAKVQLHWVRSAVPDFAMPFYLSGGLLAVLAVLCASVFAMPPHKRRKRMVEGT ECCCCCCCCEEEEEEHHHCCCCHHHHHHHCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHH ASAVIEEEAPASIAVSGKPDGASRRNRRRHATHQRSGRASSQSEATETPVIIDPSSRNLV HHHHHHCCCCCEEEECCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCEEECCCCCCEE ADQQTGAESGAETGFSAGDNEATSVITPDELQAYFSRLAQEVNTGDDSADAGQEES ECCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA