Definition Bifidobacterium longum subsp. infantis ATCC 15697, complete genome.
Accession NC_011593
Length 2,832,748

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The map label for this gene is 213691228

Identifier: 213691228

GI number: 213691228

Start: 361685

End: 362455

Strand: Direct

Name: 213691228

Synonym: Blon_0311

Alternate gene names: NA

Gene position: 361685-362455 (Clockwise)

Preceding gene: 213691227

Following gene: 213691230

Centisome position: 12.77

GC content: 58.24

Gene sequence:

>771_bases
ATGCGAGTTATTGTTGCCGACTGTTCGGCCGAGTATTCGGGCCGCCTCAACGCCTCACTGCCCCTGGCCAAACGTGTATT
GCTGATCAAGGCCGATTCCAGCCTGTTGATTTTCTCCGAATTGGGCTCCTACAAGCCGCTGAACTGGATGACCGCGCCCT
GCACGATTCGTGAGATCGACCCAGCCGCCAAATCTGCGCAACATTCCCGGGAAAGTGTCGCTGGTGGGGCTGTGGATGGT
GATTCCGCGACGCATTCCCCGGAAAGTGTCGCCGCTGGTGAGCCGGAAAAGGTGTTACGTGTCAGCGCCGACAAGGGCTC
GGACATTCTTGAAGTGACGCTGCAACACATCTATTCCGACCAAACCTATGATCTGGGCGAAGATCCGGGTCTCATCAAGG
ATGGCGTGGAAGACCATCTGCAGCGCTATCTGGCCGAGCAGATCGAGCGTATCGGCAAGGGAGCCAAGCTGGTGCGTCGC
GAATACCCGACCGCCATTGGCCCAGTGGATATTATGGCCGTGAATGCCGAAGGCGAGCATGTGGCTGTGGAAATCAAACG
TCACGGCGGCATTGATGGCGTCGAGCAGCTGACTCGCTACTGCGAACTGCTCAATCGTGATCCGCTGCTGGCCCCGGTGC
ACGGCATCTTCGCCGCACAAACCATCACGCCGCAAGCCCAGGTCTTGGCCAAGGACCGTGGCTTCACCTGCCTCATTCTC
GATTACGACGATATGAAAGGCACCGAGGACGACAGTCTCAGGCTGTTCTAG

Upstream 100 bases:

>100_bases
CATCGCCGAGTGATCTGAACCAACTCCTTAAGGGACTCTCTGGTTTTCCAGAGAGCCCCTTTTGCTATGTATGCCATGTG
TTGCGCTACAGTGGTGGCCT

Downstream 100 bases:

>100_bases
ATATAGCAGGGGCTCCCTCATCAGAGGGAGCCCCTGCTATATCTTTATCTTTTAGTACGCGGCGAGAATATCGATTACGA
AGACCAACGTGGAGTTGGCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 256; Mature: 256

Protein sequence:

>256_residues
MRVIVADCSAEYSGRLNASLPLAKRVLLIKADSSLLIFSELGSYKPLNWMTAPCTIREIDPAAKSAQHSRESVAGGAVDG
DSATHSPESVAAGEPEKVLRVSADKGSDILEVTLQHIYSDQTYDLGEDPGLIKDGVEDHLQRYLAEQIERIGKGAKLVRR
EYPTAIGPVDIMAVNAEGEHVAVEIKRHGGIDGVEQLTRYCELLNRDPLLAPVHGIFAAQTITPQAQVLAKDRGFTCLIL
DYDDMKGTEDDSLRLF

Sequences:

>Translated_256_residues
MRVIVADCSAEYSGRLNASLPLAKRVLLIKADSSLLIFSELGSYKPLNWMTAPCTIREIDPAAKSAQHSRESVAGGAVDG
DSATHSPESVAAGEPEKVLRVSADKGSDILEVTLQHIYSDQTYDLGEDPGLIKDGVEDHLQRYLAEQIERIGKGAKLVRR
EYPTAIGPVDIMAVNAEGEHVAVEIKRHGGIDGVEQLTRYCELLNRDPLLAPVHGIFAAQTITPQAQVLAKDRGFTCLIL
DYDDMKGTEDDSLRLF
>Mature_256_residues
MRVIVADCSAEYSGRLNASLPLAKRVLLIKADSSLLIFSELGSYKPLNWMTAPCTIREIDPAAKSAQHSRESVAGGAVDG
DSATHSPESVAAGEPEKVLRVSADKGSDILEVTLQHIYSDQTYDLGEDPGLIKDGVEDHLQRYLAEQIERIGKGAKLVRR
EYPTAIGPVDIMAVNAEGEHVAVEIKRHGGIDGVEQLTRYCELLNRDPLLAPVHGIFAAQTITPQAQVLAKDRGFTCLIL
DYDDMKGTEDDSLRLF

Specific function: Unknown

COG id: COG1637

COG function: function code L; Predicted nuclease of the RecB family

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0286 family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y1121_BIFLD (B3DTU8)

Other databases:

- EMBL:   CP000605
- RefSeq:   YP_001955065.1
- GeneID:   6364630
- GenomeReviews:   CP000605_GR
- KEGG:   blj:BLD_1121
- HOGENOM:   HBG322466
- OMA:   VDYVGRL
- ProtClustDB:   PRK03298
- HAMAP:   MF_00722
- InterPro:   IPR002793

Pfam domain/function: PF01939 DUF91

EC number: NA

Molecular weight: Translated: 27867; Mature: 27867

Theoretical pI: Translated: 4.75; Mature: 4.75

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRVIVADCSAEYSGRLNASLPLAKRVLLIKADSSLLIFSELGSYKPLNWMTAPCTIREID
CEEEEEECCCCCCCCCCCCCCCEEEEEEEECCCCEEEEECCCCCCCCCEEECCEEEEECC
PAAKSAQHSRESVAGGAVDGDSATHSPESVAAGEPEKVLRVSADKGSDILEVTLQHIYSD
HHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHEEEEECCCCCHHHHHHHHHHHCC
QTYDLGEDPGLIKDGVEDHLQRYLAEQIERIGKGAKLVRREYPTAIGPVDIMAVNAEGEH
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCEEEEEECCCCCE
VAVEIKRHGGIDGVEQLTRYCELLNRDPLLAPVHGIFAAQTITPQAQVLAKDRGFTCLIL
EEEEEECCCCCCHHHHHHHHHHHHCCCCCEEHHHHHHHHHCCCCHHHHHCCCCCCEEEEE
DYDDMKGTEDDSLRLF
ECCCCCCCCCCCEEEC
>Mature Secondary Structure
MRVIVADCSAEYSGRLNASLPLAKRVLLIKADSSLLIFSELGSYKPLNWMTAPCTIREID
CEEEEEECCCCCCCCCCCCCCCEEEEEEEECCCCEEEEECCCCCCCCCEEECCEEEEECC
PAAKSAQHSRESVAGGAVDGDSATHSPESVAAGEPEKVLRVSADKGSDILEVTLQHIYSD
HHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHEEEEECCCCCHHHHHHHHHHHCC
QTYDLGEDPGLIKDGVEDHLQRYLAEQIERIGKGAKLVRREYPTAIGPVDIMAVNAEGEH
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCEEEEEECCCCCE
VAVEIKRHGGIDGVEQLTRYCELLNRDPLLAPVHGIFAAQTITPQAQVLAKDRGFTCLIL
EEEEEECCCCCCHHHHHHHHHHHHCCCCCEEHHHHHHHHHCCCCHHHHHCCCCCCEEEEE
DYDDMKGTEDDSLRLF
ECCCCCCCCCCCEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA