| Definition | Bifidobacterium longum subsp. infantis ATCC 15697, complete genome. |
|---|---|
| Accession | NC_011593 |
| Length | 2,832,748 |
Click here to switch to the map view.
The map label for this gene is 213691184
Identifier: 213691184
GI number: 213691184
Start: 310656
End: 312269
Strand: Direct
Name: 213691184
Synonym: Blon_0264
Alternate gene names: NA
Gene position: 310656-312269 (Clockwise)
Preceding gene: 213691183
Following gene: 213691185
Centisome position: 10.97
GC content: 61.4
Gene sequence:
>1614_bases GTGACGCAAAAGCAATCCGTGGTGATTATCGGCGGCGGTCCGGCTGGACTGACCGCCGCATGGGAACTCGTCAAGGACGG CGGCGCGGAAAACTATGACGTGACCGTGCTGGAAGCGACCCGCGAATTCGGCGGTATCTCGCGCACCGTGAAGCACAACG GCAACCGCATGGATATCGGCGGCCACCGTTTCTTCTCCAAAGACGAACGCATCATGGATTGGTGGAAGACCGTTCTGCCG TTGCAGGGCGCACCCTCCTATGATGACAAGAAGCTCGGCCGCGACCACGACATGGAGCCGGGAGGCCCCGATCCGGAGAC GGAGGACAAGGTGATGCTCAAGCGCCACCGCGTGTCCCGTATCTTCTGGAACCGCCACTTCTTCGATTACCCGATTTCGC TGAGCCCCAACACGTTGAAGGCCATGGGCTTCAAGCTCACCATGGTGGCCGGTTTCAGCTACCTGAAGTCCATGTTCCAC AAGCTGCCGGAAGACAACCTGGAGAACTTCTACATCAACCGTTTCGGCCGCAAGCTGTATTCGATGTTCTTCGAGGGCTA CACGGAGAAGCTGTGGGGCCGCCACCCCTCCCAGATCTCCGCCGACTGGGGTGCCCAGCGCGTCAAGGGCCTGTCCATCA TGGGCGTGCTCAAGAACGCCTTCCAGAAGCTTAGCCCTAGGAAGCGCTCCAACGCGGAGGTCGAGACCTCGCTGATCGAG GAGTTCTGGTATCCGAAGTACGGTCCCGGCCAGCTGTGGGAGACCGTCGAGTCCAATTGCGAGGCCGCCGGCGTCAAGGT GCTGACCGACGCCAGGGTGGTCGAGGTCCGCCAGACCGATGGTGCCGTGTCTTCCGTGGTGTACGAGGATTCCGAGGGCA ACCGCACCGAGCTTTCCGGCGACCAGTTCATCTCCTCGATGCCGGTCAAGGACCTGGTCAACGCCATCGACGCGGCCGGC GACGATCCCGAGGCCGCTGATTCCAAGCCCGCCCCGGCCGATATGACCGAGGTGGCCAACGGCCTGCCGTACCGCGACTT CGTGACCGTGGGCCTGCTGGTCAAGCACCTGAAGCTCAAGAACACCACCAACATCCCCACCCTCGGCAATCCGCCGATCG TGCCGGACTGCTGGATCTACGTGCAGGACCCGGGCTACAAGGTCGGCCGTCTGCAGATCTTCAACAACTGGAGCCCGTAT CTGGTCAAGGACGTGGACGACACCGTCTGGGTCGGCCTCGAGTACTTCTGCGAGGAGGGCGACTCGTTCTGGAACATGAG CGAGGAGGACGTCACCAAGTTCGCGATCTCCGAGCTCACCCGCATGCGTGTGATCAACGGTCCGGACGAGGTCATCGACT CCCATCGTGAGCGCGTCAGGAAGGCGTACCCCGCCTACTTCGACACCTATGAGCACATGGACGAGCTCATCGAGTACCTC GACGGCTTCGGCAACCTGTACTGCGTGGGCCGTAACGGCCAGCACCGCTACAACAACATGGACCACTCCATGGCCACCGC CATGGAGGCCGTCGGCAACATCAAGACCGGCAAGACGTCCAAGAAGAACGTGTGGTCCGTCAACACCGAAAAGTCCTACC ACGAAAAAAAGTGA
Upstream 100 bases:
>100_bases GCGACAAAGCCGCACGCCGGGACCATGCACGATTGCAAGCATCGTCTTCCCTACCTTCGGGTAGACTGCTTGAGATCTTG TTTTATAAGGAGACCTCAAA
Downstream 100 bases:
>100_bases GTAAACCTTGTTGAGCTCCCTCGTCACAGAGGGAGTTTTTTTTGGTTTTCGGCGGGCCGTTTTGCGTTGGTCGAGTTGGC GTTGTACAGTAAACGAAGTT
Product: hypothetical protein
Products: NA
Alternate protein names: FAD Dependent Oxidoreductase; UDP-Galactopyranose Mutase; Amine Oxidase Flavin-Containing; Amine Oxidase Flavin-Containing Superfamily; Flavin Containing Amine Oxidoreductase; LOW QUALITY PROTEIN Protoporphyrinogen Oxidase; Oxidoreductase; Glycosyl Transferase Family 2 Protein; FAD-Dependent Pyridine Nucleotide-Disulfide Oxidoreductase; FAD-Dependent Oxidoreductase; Oxidase; Protoporphyrinogen Oxidase-Like Protein
Number of amino acids: Translated: 537; Mature: 536
Protein sequence:
>537_residues MTQKQSVVIIGGGPAGLTAAWELVKDGGAENYDVTVLEATREFGGISRTVKHNGNRMDIGGHRFFSKDERIMDWWKTVLP LQGAPSYDDKKLGRDHDMEPGGPDPETEDKVMLKRHRVSRIFWNRHFFDYPISLSPNTLKAMGFKLTMVAGFSYLKSMFH KLPEDNLENFYINRFGRKLYSMFFEGYTEKLWGRHPSQISADWGAQRVKGLSIMGVLKNAFQKLSPRKRSNAEVETSLIE EFWYPKYGPGQLWETVESNCEAAGVKVLTDARVVEVRQTDGAVSSVVYEDSEGNRTELSGDQFISSMPVKDLVNAIDAAG DDPEAADSKPAPADMTEVANGLPYRDFVTVGLLVKHLKLKNTTNIPTLGNPPIVPDCWIYVQDPGYKVGRLQIFNNWSPY LVKDVDDTVWVGLEYFCEEGDSFWNMSEEDVTKFAISELTRMRVINGPDEVIDSHRERVRKAYPAYFDTYEHMDELIEYL DGFGNLYCVGRNGQHRYNNMDHSMATAMEAVGNIKTGKTSKKNVWSVNTEKSYHEKK
Sequences:
>Translated_537_residues MTQKQSVVIIGGGPAGLTAAWELVKDGGAENYDVTVLEATREFGGISRTVKHNGNRMDIGGHRFFSKDERIMDWWKTVLP LQGAPSYDDKKLGRDHDMEPGGPDPETEDKVMLKRHRVSRIFWNRHFFDYPISLSPNTLKAMGFKLTMVAGFSYLKSMFH KLPEDNLENFYINRFGRKLYSMFFEGYTEKLWGRHPSQISADWGAQRVKGLSIMGVLKNAFQKLSPRKRSNAEVETSLIE EFWYPKYGPGQLWETVESNCEAAGVKVLTDARVVEVRQTDGAVSSVVYEDSEGNRTELSGDQFISSMPVKDLVNAIDAAG DDPEAADSKPAPADMTEVANGLPYRDFVTVGLLVKHLKLKNTTNIPTLGNPPIVPDCWIYVQDPGYKVGRLQIFNNWSPY LVKDVDDTVWVGLEYFCEEGDSFWNMSEEDVTKFAISELTRMRVINGPDEVIDSHRERVRKAYPAYFDTYEHMDELIEYL DGFGNLYCVGRNGQHRYNNMDHSMATAMEAVGNIKTGKTSKKNVWSVNTEKSYHEKK >Mature_536_residues TQKQSVVIIGGGPAGLTAAWELVKDGGAENYDVTVLEATREFGGISRTVKHNGNRMDIGGHRFFSKDERIMDWWKTVLPL QGAPSYDDKKLGRDHDMEPGGPDPETEDKVMLKRHRVSRIFWNRHFFDYPISLSPNTLKAMGFKLTMVAGFSYLKSMFHK LPEDNLENFYINRFGRKLYSMFFEGYTEKLWGRHPSQISADWGAQRVKGLSIMGVLKNAFQKLSPRKRSNAEVETSLIEE FWYPKYGPGQLWETVESNCEAAGVKVLTDARVVEVRQTDGAVSSVVYEDSEGNRTELSGDQFISSMPVKDLVNAIDAAGD DPEAADSKPAPADMTEVANGLPYRDFVTVGLLVKHLKLKNTTNIPTLGNPPIVPDCWIYVQDPGYKVGRLQIFNNWSPYL VKDVDDTVWVGLEYFCEEGDSFWNMSEEDVTKFAISELTRMRVINGPDEVIDSHRERVRKAYPAYFDTYEHMDELIEYLD GFGNLYCVGRNGQHRYNNMDHSMATAMEAVGNIKTGKTSKKNVWSVNTEKSYHEKK
Specific function: Unknown
COG id: COG1232
COG function: function code H; Protoporphyrinogen oxidase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 60926; Mature: 60795
Theoretical pI: Translated: 5.81; Mature: 5.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTQKQSVVIIGGGPAGLTAAWELVKDGGAENYDVTVLEATREFGGISRTVKHNGNRMDIG CCCCCEEEEECCCCCCHHHHHHHHHCCCCCCCEEEEEECHHHHCCCHHHHHCCCCEECCC GHRFFSKDERIMDWWKTVLPLQGAPSYDDKKLGRDHDMEPGGPDPETEDKVMLKRHRVSR CCCCCCCCHHHHHHHHHHHCCCCCCCCCHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHH IFWNRHFFDYPISLSPNTLKAMGFKLTMVAGFSYLKSMFHKLPEDNLENFYINRFGRKLY HHHCCCEECCCCCCCCCHHHHHCEEHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH SMFFEGYTEKLWGRHPSQISADWGAQRVKGLSIMGVLKNAFQKLSPRKRSNAEVETSLIE HHHHHHHHHHHCCCCCCCCCCHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHH EFWYPKYGPGQLWETVESNCEAAGVKVLTDARVVEVRQTDGAVSSVVYEDSEGNRTELSG HHCCCCCCCHHHHHHHHCCCCCCCEEEEECCEEEEEECCCCCHHHEEEECCCCCCCCCCH DQFISSMPVKDLVNAIDAAGDDPEAADSKPAPADMTEVANGLPYRDFVTVGLLVKHLKLK HHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHC NTTNIPTLGNPPIVPDCWIYVQDPGYKVGRLQIFNNWSPYLVKDVDDTVWVGLEYFCEEG CCCCCCCCCCCCCCCCCEEEEECCCCCEEEEEEECCCCCCEEECCCCHHHHHHHHHHHCC DSFWNMSEEDVTKFAISELTRMRVINGPDEVIDSHRERVRKAYPAYFDTYEHMDELIEYL CCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH DGFGNLYCVGRNGQHRYNNMDHSMATAMEAVGNIKTGKTSKKNVWSVNTEKSYHEKK CCCCCEEEECCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCHHCCCC >Mature Secondary Structure TQKQSVVIIGGGPAGLTAAWELVKDGGAENYDVTVLEATREFGGISRTVKHNGNRMDIG CCCCEEEEECCCCCCHHHHHHHHHCCCCCCCEEEEEECHHHHCCCHHHHHCCCCEECCC GHRFFSKDERIMDWWKTVLPLQGAPSYDDKKLGRDHDMEPGGPDPETEDKVMLKRHRVSR CCCCCCCCHHHHHHHHHHHCCCCCCCCCHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHH IFWNRHFFDYPISLSPNTLKAMGFKLTMVAGFSYLKSMFHKLPEDNLENFYINRFGRKLY HHHCCCEECCCCCCCCCHHHHHCEEHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH SMFFEGYTEKLWGRHPSQISADWGAQRVKGLSIMGVLKNAFQKLSPRKRSNAEVETSLIE HHHHHHHHHHHCCCCCCCCCCHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHH EFWYPKYGPGQLWETVESNCEAAGVKVLTDARVVEVRQTDGAVSSVVYEDSEGNRTELSG HHCCCCCCCHHHHHHHHCCCCCCCEEEEECCEEEEEECCCCCHHHEEEECCCCCCCCCCH DQFISSMPVKDLVNAIDAAGDDPEAADSKPAPADMTEVANGLPYRDFVTVGLLVKHLKLK HHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHC NTTNIPTLGNPPIVPDCWIYVQDPGYKVGRLQIFNNWSPYLVKDVDDTVWVGLEYFCEEG CCCCCCCCCCCCCCCCCEEEEECCCCCEEEEEEECCCCCCEEECCCCHHHHHHHHHHHCC DSFWNMSEEDVTKFAISELTRMRVINGPDEVIDSHRERVRKAYPAYFDTYEHMDELIEYL CCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH DGFGNLYCVGRNGQHRYNNMDHSMATAMEAVGNIKTGKTSKKNVWSVNTEKSYHEKK CCCCCEEEECCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA