| Definition | Bifidobacterium longum subsp. infantis ATCC 15697, complete genome. |
|---|---|
| Accession | NC_011593 |
| Length | 2,832,748 |
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The map label for this gene is 213691162
Identifier: 213691162
GI number: 213691162
Start: 284935
End: 285705
Strand: Reverse
Name: 213691162
Synonym: Blon_0241
Alternate gene names: NA
Gene position: 285705-284935 (Counterclockwise)
Preceding gene: 213691163
Following gene: 213691161
Centisome position: 10.09
GC content: 47.6
Gene sequence:
>771_bases ATGATAAGTGAGAGTGGACTGAATAAATCGCGGCTTATATGCGGTGCGCGAATGCTCACATCTCTATTAAAATGGAGCTT TGTACGGCATAGATATCTATTTATCGCTTTCACCATGGTACAGACAGTATTTGCGCTAGCAATCGTATACGGTCTTACTC TGATGATGGGAAGTCTCACCACCAGTCAGGCTGAGCAACTCTCTGCAGGTGTATGGCAGCTTGGTCTGGTGGCGGTGGGG TGCACTATTGCTCCGCAGCTATTATCGGAATCCATTTCCGAAGGATTACTTGAATATCAGCGTAATTTGCCGGTACCGAG GATTTGTCTCCTGATAGCTGACTTCATTATCTGGATTGCGGTGTCCATTCCGGGTGTCGTTGCCGGATTCGTTGCCTCAA CAATGAAATTTGGACTCATACAGATGGCGACCTCATATTTAGTCATGATGTTACTTCTCTGTGCATTGGGGAACCTGTCA TTGGGGTACATGTTGGCTATAGGGCTACCTTGCGGTGGAGTAACGGTTGTCGGTCAGCTAATCATGCTAGCAACAATGCT GTTCGCACCGATTCTATACCCGTCCGACAAATTACCATCAATAGTTCTTACCATTCATGATTGGATGCCCTTCGTACCGA TGCACCGAATGCTCACCGATGCCGCATTCCCCGGTAGCAACATAAGCCATTCGATTGATTTATTCGTAGTCTTCGCATGG TGTCTTACCGGCGTGGCCGGTTGCCTTGCGGGATTATCCAAAAGGAGATGA
Upstream 100 bases:
>100_bases TGAGCCGGCTGAACATGCTGATGGGCGATGAGCCAGAACTGTCGTTCTCGGTGCAACACGGCACGTTGCGCGAAGCATAT GAAAGGATAATCGACGTCCG
Downstream 100 bases:
>100_bases AATGAAATCACTGTCGGCAACTCTCTACTGCAACAGGGTGTCGAAAACTATCGGCGGGAAACCGGTCCTGAACGACATAT CATTCAGCGCGTATCCCGGA
Product: ABC-2 type transporter
Products: NA
Alternate protein names: ABC Transporter Membrane Protein; ABC Transporter Permease; ABC Transporter Membrane-Spanning Protein; ABC Transporter Permease Protein
Number of amino acids: Translated: 256; Mature: 256
Protein sequence:
>256_residues MISESGLNKSRLICGARMLTSLLKWSFVRHRYLFIAFTMVQTVFALAIVYGLTLMMGSLTTSQAEQLSAGVWQLGLVAVG CTIAPQLLSESISEGLLEYQRNLPVPRICLLIADFIIWIAVSIPGVVAGFVASTMKFGLIQMATSYLVMMLLLCALGNLS LGYMLAIGLPCGGVTVVGQLIMLATMLFAPILYPSDKLPSIVLTIHDWMPFVPMHRMLTDAAFPGSNISHSIDLFVVFAW CLTGVAGCLAGLSKRR
Sequences:
>Translated_256_residues MISESGLNKSRLICGARMLTSLLKWSFVRHRYLFIAFTMVQTVFALAIVYGLTLMMGSLTTSQAEQLSAGVWQLGLVAVG CTIAPQLLSESISEGLLEYQRNLPVPRICLLIADFIIWIAVSIPGVVAGFVASTMKFGLIQMATSYLVMMLLLCALGNLS LGYMLAIGLPCGGVTVVGQLIMLATMLFAPILYPSDKLPSIVLTIHDWMPFVPMHRMLTDAAFPGSNISHSIDLFVVFAW CLTGVAGCLAGLSKRR >Mature_256_residues MISESGLNKSRLICGARMLTSLLKWSFVRHRYLFIAFTMVQTVFALAIVYGLTLMMGSLTTSQAEQLSAGVWQLGLVAVG CTIAPQLLSESISEGLLEYQRNLPVPRICLLIADFIIWIAVSIPGVVAGFVASTMKFGLIQMATSYLVMMLLLCALGNLS LGYMLAIGLPCGGVTVVGQLIMLATMLFAPILYPSDKLPSIVLTIHDWMPFVPMHRMLTDAAFPGSNISHSIDLFVVFAW CLTGVAGCLAGLSKRR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27741; Mature: 27741
Theoretical pI: Translated: 8.48; Mature: 8.48
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.7 %Cys (Translated Protein) 5.9 %Met (Translated Protein) 8.6 %Cys+Met (Translated Protein) 2.7 %Cys (Mature Protein) 5.9 %Met (Mature Protein) 8.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MISESGLNKSRLICGARMLTSLLKWSFVRHRYLFIAFTMVQTVFALAIVYGLTLMMGSLT CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TSQAEQLSAGVWQLGLVAVGCTIAPQLLSESISEGLLEYQRNLPVPRICLLIADFIIWIA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH VSIPGVVAGFVASTMKFGLIQMATSYLVMMLLLCALGNLSLGYMLAIGLPCGGVTVVGQL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCHHHHHHHH IMLATMLFAPILYPSDKLPSIVLTIHDWMPFVPMHRMLTDAAFPGSNISHSIDLFVVFAW HHHHHHHHHHHCCCCCCCCEEEEEHHHHCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHH CLTGVAGCLAGLSKRR HHHHHHHHHHHHHCCC >Mature Secondary Structure MISESGLNKSRLICGARMLTSLLKWSFVRHRYLFIAFTMVQTVFALAIVYGLTLMMGSLT CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TSQAEQLSAGVWQLGLVAVGCTIAPQLLSESISEGLLEYQRNLPVPRICLLIADFIIWIA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH VSIPGVVAGFVASTMKFGLIQMATSYLVMMLLLCALGNLSLGYMLAIGLPCGGVTVVGQL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCHHHHHHHH IMLATMLFAPILYPSDKLPSIVLTIHDWMPFVPMHRMLTDAAFPGSNISHSIDLFVVFAW HHHHHHHHHHHCCCCCCCCEEEEEHHHHCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHH CLTGVAGCLAGLSKRR HHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA