Definition Bifidobacterium longum subsp. infantis ATCC 15697, complete genome.
Accession NC_011593
Length 2,832,748

Click here to switch to the map view.

The map label for this gene is 213691162

Identifier: 213691162

GI number: 213691162

Start: 284935

End: 285705

Strand: Reverse

Name: 213691162

Synonym: Blon_0241

Alternate gene names: NA

Gene position: 285705-284935 (Counterclockwise)

Preceding gene: 213691163

Following gene: 213691161

Centisome position: 10.09

GC content: 47.6

Gene sequence:

>771_bases
ATGATAAGTGAGAGTGGACTGAATAAATCGCGGCTTATATGCGGTGCGCGAATGCTCACATCTCTATTAAAATGGAGCTT
TGTACGGCATAGATATCTATTTATCGCTTTCACCATGGTACAGACAGTATTTGCGCTAGCAATCGTATACGGTCTTACTC
TGATGATGGGAAGTCTCACCACCAGTCAGGCTGAGCAACTCTCTGCAGGTGTATGGCAGCTTGGTCTGGTGGCGGTGGGG
TGCACTATTGCTCCGCAGCTATTATCGGAATCCATTTCCGAAGGATTACTTGAATATCAGCGTAATTTGCCGGTACCGAG
GATTTGTCTCCTGATAGCTGACTTCATTATCTGGATTGCGGTGTCCATTCCGGGTGTCGTTGCCGGATTCGTTGCCTCAA
CAATGAAATTTGGACTCATACAGATGGCGACCTCATATTTAGTCATGATGTTACTTCTCTGTGCATTGGGGAACCTGTCA
TTGGGGTACATGTTGGCTATAGGGCTACCTTGCGGTGGAGTAACGGTTGTCGGTCAGCTAATCATGCTAGCAACAATGCT
GTTCGCACCGATTCTATACCCGTCCGACAAATTACCATCAATAGTTCTTACCATTCATGATTGGATGCCCTTCGTACCGA
TGCACCGAATGCTCACCGATGCCGCATTCCCCGGTAGCAACATAAGCCATTCGATTGATTTATTCGTAGTCTTCGCATGG
TGTCTTACCGGCGTGGCCGGTTGCCTTGCGGGATTATCCAAAAGGAGATGA

Upstream 100 bases:

>100_bases
TGAGCCGGCTGAACATGCTGATGGGCGATGAGCCAGAACTGTCGTTCTCGGTGCAACACGGCACGTTGCGCGAAGCATAT
GAAAGGATAATCGACGTCCG

Downstream 100 bases:

>100_bases
AATGAAATCACTGTCGGCAACTCTCTACTGCAACAGGGTGTCGAAAACTATCGGCGGGAAACCGGTCCTGAACGACATAT
CATTCAGCGCGTATCCCGGA

Product: ABC-2 type transporter

Products: NA

Alternate protein names: ABC Transporter Membrane Protein; ABC Transporter Permease; ABC Transporter Membrane-Spanning Protein; ABC Transporter Permease Protein

Number of amino acids: Translated: 256; Mature: 256

Protein sequence:

>256_residues
MISESGLNKSRLICGARMLTSLLKWSFVRHRYLFIAFTMVQTVFALAIVYGLTLMMGSLTTSQAEQLSAGVWQLGLVAVG
CTIAPQLLSESISEGLLEYQRNLPVPRICLLIADFIIWIAVSIPGVVAGFVASTMKFGLIQMATSYLVMMLLLCALGNLS
LGYMLAIGLPCGGVTVVGQLIMLATMLFAPILYPSDKLPSIVLTIHDWMPFVPMHRMLTDAAFPGSNISHSIDLFVVFAW
CLTGVAGCLAGLSKRR

Sequences:

>Translated_256_residues
MISESGLNKSRLICGARMLTSLLKWSFVRHRYLFIAFTMVQTVFALAIVYGLTLMMGSLTTSQAEQLSAGVWQLGLVAVG
CTIAPQLLSESISEGLLEYQRNLPVPRICLLIADFIIWIAVSIPGVVAGFVASTMKFGLIQMATSYLVMMLLLCALGNLS
LGYMLAIGLPCGGVTVVGQLIMLATMLFAPILYPSDKLPSIVLTIHDWMPFVPMHRMLTDAAFPGSNISHSIDLFVVFAW
CLTGVAGCLAGLSKRR
>Mature_256_residues
MISESGLNKSRLICGARMLTSLLKWSFVRHRYLFIAFTMVQTVFALAIVYGLTLMMGSLTTSQAEQLSAGVWQLGLVAVG
CTIAPQLLSESISEGLLEYQRNLPVPRICLLIADFIIWIAVSIPGVVAGFVASTMKFGLIQMATSYLVMMLLLCALGNLS
LGYMLAIGLPCGGVTVVGQLIMLATMLFAPILYPSDKLPSIVLTIHDWMPFVPMHRMLTDAAFPGSNISHSIDLFVVFAW
CLTGVAGCLAGLSKRR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27741; Mature: 27741

Theoretical pI: Translated: 8.48; Mature: 8.48

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.7 %Cys     (Translated Protein)
5.9 %Met     (Translated Protein)
8.6 %Cys+Met (Translated Protein)
2.7 %Cys     (Mature Protein)
5.9 %Met     (Mature Protein)
8.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHHHHHCCC
>Mature Secondary Structure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HHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA