| Definition | Bifidobacterium longum subsp. infantis ATCC 15697, complete genome. |
|---|---|
| Accession | NC_011593 |
| Length | 2,832,748 |
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The map label for this gene is 213691127
Identifier: 213691127
GI number: 213691127
Start: 248783
End: 250069
Strand: Direct
Name: 213691127
Synonym: Blon_0206
Alternate gene names: NA
Gene position: 248783-250069 (Clockwise)
Preceding gene: 213691123
Following gene: 213691128
Centisome position: 8.78
GC content: 62.08
Gene sequence:
>1287_bases ATGGTTGAATTCAAGGACGATGGCACGGCCACTACCCTTGGAAAGACGCGAGAGAACCGTGACGCCGAGTCCGCAGTCGT GGCCGATCTGGTGGCCGTTGAATTGGACGACGCCGGCTTGAACCTGAACGCCAAGCGATTACCGATTCTGGCGCGCATCT ATGGCGCGGTCGTACTGCTGGACGGACTCGCCACATTGCCGATTATGGTGATTTCCATCCTCTATGCCGTGCGCGAGATT CTGGATGGTCATGTGCACGTCGATGCGATGAGCCTGACCTTCATCCTGTCCGCGGTCCGCGCGGTGGTGCTGGTGGTCAG CGCCGTCTGCCTGATCGTGTTCGGCGTGATGCTGCTGCGCAACCATCGCCGGTATGCCGCGCGCTGGACCTACGTGCTGA TGCCGCTGACGCTGGCGGATGGCATGCTGTCACTGGCGTTGACCGGCCTCGGCCCCAACCTGCTGATGCCGCTGGTCCAG ATGACCATCCTCATCGTGATCTCGGTGACCGCCGACCCCTCCCTGAGCGAGGAACGGCGCCTGCAGCGCGCGCTCAAACG CATGGACGATCGAGATGACTATGAGTCGGCGGTGGCGGCCGGCATGCTGGGACGCGACCAGTCCGGCAAAGGCTACATCG CACTGGACTTCTTCAACATCTTCTGGCTGTTCACCATCGCCTCGGTATTCGGTCTGATCATGGAGACGATCTATCACATG GCGTTGTACAACGGCGAACTTCAGGACCGTGCGGGCCTGCTGTGGGGGCCGTTCTCGCCTATCTACGGCTGCGGCGCGGT GCTGGTGACCGTATGCCTGAACCGCCTGTGGAAAGCGAACCCGTTCCTGATCTTCTGCGCCTCGGCGGTGATCGGCGGCG CGTTCGAATACTGCACGAGCTGGTTCATGGAGGCGGCCTTCGGCATCACCGCGTGGGACTACACCGGCCGATGGCTGTCG ATCGACGGGCGCACCTCGGGCCTGTTCATGTTCTTCTGGGGTCTGATCGGCGTGGCGTGGGTCAAATGGCTGCTGCCGCG ACTGCTCGCCCTGATTAACCGCATTCCCTGGAAGGTGCGGTATTCGCTGACCGCCGTATGCGCGGTGCTGATGGTGATCG ACATCGCCTTCACGCTGATGGCCTTGGACTGCTGGTACGGGCGCATGGCCGGCCAACCGCAGAATTCACCGGTCGCGGTG TGGTTCAGTGAACGGTATGGCGATGCGTACATGGCCAACCGTTTCCAGACCATGCACATCGACCCTTCCAAGGCCGGGCG TATGTGA
Upstream 100 bases:
>100_bases GAGTTGCCGGAAGTGTCAGAACCTGTGCCGGCCGTCCATCAAGTTCGGCAAAACTGCAATCGGGTGATAGTGTAAGGGGA CGCTATGTGGGGAGGAAACC
Downstream 100 bases:
>100_bases ATGGCAAGTAATTACGCTTCGCGGGCAGAAGGTGCGTAGAGCCTAAGACAGCCCTCGTGCGTGGGTGATAAGCGGGATAC ACTTTCAAGCGTTGAAGGAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 428; Mature: 428
Protein sequence:
>428_residues MVEFKDDGTATTLGKTRENRDAESAVVADLVAVELDDAGLNLNAKRLPILARIYGAVVLLDGLATLPIMVISILYAVREI LDGHVHVDAMSLTFILSAVRAVVLVVSAVCLIVFGVMLLRNHRRYAARWTYVLMPLTLADGMLSLALTGLGPNLLMPLVQ MTILIVISVTADPSLSEERRLQRALKRMDDRDDYESAVAAGMLGRDQSGKGYIALDFFNIFWLFTIASVFGLIMETIYHM ALYNGELQDRAGLLWGPFSPIYGCGAVLVTVCLNRLWKANPFLIFCASAVIGGAFEYCTSWFMEAAFGITAWDYTGRWLS IDGRTSGLFMFFWGLIGVAWVKWLLPRLLALINRIPWKVRYSLTAVCAVLMVIDIAFTLMALDCWYGRMAGQPQNSPVAV WFSERYGDAYMANRFQTMHIDPSKAGRM
Sequences:
>Translated_428_residues MVEFKDDGTATTLGKTRENRDAESAVVADLVAVELDDAGLNLNAKRLPILARIYGAVVLLDGLATLPIMVISILYAVREI LDGHVHVDAMSLTFILSAVRAVVLVVSAVCLIVFGVMLLRNHRRYAARWTYVLMPLTLADGMLSLALTGLGPNLLMPLVQ MTILIVISVTADPSLSEERRLQRALKRMDDRDDYESAVAAGMLGRDQSGKGYIALDFFNIFWLFTIASVFGLIMETIYHM ALYNGELQDRAGLLWGPFSPIYGCGAVLVTVCLNRLWKANPFLIFCASAVIGGAFEYCTSWFMEAAFGITAWDYTGRWLS IDGRTSGLFMFFWGLIGVAWVKWLLPRLLALINRIPWKVRYSLTAVCAVLMVIDIAFTLMALDCWYGRMAGQPQNSPVAV WFSERYGDAYMANRFQTMHIDPSKAGRM >Mature_428_residues MVEFKDDGTATTLGKTRENRDAESAVVADLVAVELDDAGLNLNAKRLPILARIYGAVVLLDGLATLPIMVISILYAVREI LDGHVHVDAMSLTFILSAVRAVVLVVSAVCLIVFGVMLLRNHRRYAARWTYVLMPLTLADGMLSLALTGLGPNLLMPLVQ MTILIVISVTADPSLSEERRLQRALKRMDDRDDYESAVAAGMLGRDQSGKGYIALDFFNIFWLFTIASVFGLIMETIYHM ALYNGELQDRAGLLWGPFSPIYGCGAVLVTVCLNRLWKANPFLIFCASAVIGGAFEYCTSWFMEAAFGITAWDYTGRWLS IDGRTSGLFMFFWGLIGVAWVKWLLPRLLALINRIPWKVRYSLTAVCAVLMVIDIAFTLMALDCWYGRMAGQPQNSPVAV WFSERYGDAYMANRFQTMHIDPSKAGRM
Specific function: Unknown
COG id: COG4905
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 47591; Mature: 47591
Theoretical pI: Translated: 6.99; Mature: 6.99
Prosite motif: PS00213 LIPOCALIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 4.7 %Met (Translated Protein) 6.3 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 4.7 %Met (Mature Protein) 6.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVEFKDDGTATTLGKTRENRDAESAVVADLVAVELDDAGLNLNAKRLPILARIYGAVVLL CCEECCCCCEEECCCCCCCCCHHHHHHHHHHHEEECCCCCCCCHHHHHHHHHHHHHHHHH DGLATLPIMVISILYAVREILDGHVHVDAMSLTFILSAVRAVVLVVSAVCLIVFGVMLLR HHHHHHHHHHHHHHHHHHHHHCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH NHRRYAARWTYVLMPLTLADGMLSLALTGLGPNLLMPLVQMTILIVISVTADPSLSEERR CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHEEECCCCCCCHHHH LQRALKRMDDRDDYESAVAAGMLGRDQSGKGYIALDFFNIFWLFTIASVFGLIMETIYHM HHHHHHHCCCCCHHHHHHHHHHCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHH ALYNGELQDRAGLLWGPFSPIYGCGAVLVTVCLNRLWKANPFLIFCASAVIGGAFEYCTS HHHCCCHHHCCCCEECCCCHHHHHHHHHHHHHHHHHHCCCCHHEEHHHHHHHHHHHHHHH WFMEAAFGITAWDYTGRWLSIDGRTSGLFMFFWGLIGVAWVKWLLPRLLALINRIPWKVR HHHHHHHCCEEEECCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH YSLTAVCAVLMVIDIAFTLMALDCWYGRMAGQPQNSPVAVWFSERYGDAYMANRFQTMHI HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCHHHHCCEEEEEE DPSKAGRM CHHHCCCC >Mature Secondary Structure MVEFKDDGTATTLGKTRENRDAESAVVADLVAVELDDAGLNLNAKRLPILARIYGAVVLL CCEECCCCCEEECCCCCCCCCHHHHHHHHHHHEEECCCCCCCCHHHHHHHHHHHHHHHHH DGLATLPIMVISILYAVREILDGHVHVDAMSLTFILSAVRAVVLVVSAVCLIVFGVMLLR HHHHHHHHHHHHHHHHHHHHHCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH NHRRYAARWTYVLMPLTLADGMLSLALTGLGPNLLMPLVQMTILIVISVTADPSLSEERR CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHEEECCCCCCCHHHH LQRALKRMDDRDDYESAVAAGMLGRDQSGKGYIALDFFNIFWLFTIASVFGLIMETIYHM HHHHHHHCCCCCHHHHHHHHHHCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHH ALYNGELQDRAGLLWGPFSPIYGCGAVLVTVCLNRLWKANPFLIFCASAVIGGAFEYCTS HHHCCCHHHCCCCEECCCCHHHHHHHHHHHHHHHHHHCCCCHHEEHHHHHHHHHHHHHHH WFMEAAFGITAWDYTGRWLSIDGRTSGLFMFFWGLIGVAWVKWLLPRLLALINRIPWKVR HHHHHHHCCEEEECCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH YSLTAVCAVLMVIDIAFTLMALDCWYGRMAGQPQNSPVAVWFSERYGDAYMANRFQTMHI HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCHHHHCCEEEEEE DPSKAGRM CHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA