| Definition | Bifidobacterium longum subsp. infantis ATCC 15697, complete genome. |
|---|---|
| Accession | NC_011593 |
| Length | 2,832,748 |
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The map label for this gene is 213691123
Identifier: 213691123
GI number: 213691123
Start: 242123
End: 242686
Strand: Direct
Name: 213691123
Synonym: Blon_0202
Alternate gene names: NA
Gene position: 242123-242686 (Clockwise)
Preceding gene: 213691122
Following gene: 213691127
Centisome position: 8.55
GC content: 60.64
Gene sequence:
>564_bases ATGACCGAAAAGAATACGTTGAAGAAATCTGCGACATTGGCGGCGGCCGGACTGGTCGTGGCTGGCGCGCTGCTGGCCGG GTGCGGCGAATCCAAGGCCACGCCGATGGACGATGCGTACGCCGGCAACTCGGGCGAGACCGAGAAGTCGCAGGAAGAGC AGTCGCAATCCCAGTCGAACGGCTCCGATAGCTCCGACGGCTCCGATTCCGGCTCATCGCACAACGACCCGTCCACCACC ACGTCCGACAAGAAGGACACCGGCAACTACAAGGACGGCAACTACTCGATCAACGGCCAGTACGGCCCGGTCGGCGAGGA TTCCATCGACGTCCATCTGACCATCAAGGACGGCAACGTCGAGACCGTCAAAATCATTGGGCACCCGTTCACCACGATTT CCAAGAACCATCAGGACGACTTCGCCAAAGCCATCAACGGCGTAGTGGACGGCAAGCCCCTGAAGGGACTCAAAGTGGAC AAGGTCGCCGGCGCCAGCTGGACTTCCGACGCCTTCAACAAAGCCCTCGAAGTCGCCCGCCAGGAGGCTTCGATTCAGGA GTAA
Upstream 100 bases:
>100_bases TCGAGCAGTATGTGAGGAATACATGGCAAGCTGATGGTCTCTCCCCCCAGTCAGCTTCGCTGACAGCCCCCTCGTCAGAG GGGGCTTAAGGAGCGTGAAT
Downstream 100 bases:
>100_bases GACCGCTACTTCAGCAATGCTGGCCACAGCAGATCGGCCATGCGCGAGGCCCAGGCGGTGTCGTCGTCCATCGCTTTGCC CTCGATGGCCTCATACGCCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 187; Mature: 186
Protein sequence:
>187_residues MTEKNTLKKSATLAAAGLVVAGALLAGCGESKATPMDDAYAGNSGETEKSQEEQSQSQSNGSDSSDGSDSGSSHNDPSTT TSDKKDTGNYKDGNYSINGQYGPVGEDSIDVHLTIKDGNVETVKIIGHPFTTISKNHQDDFAKAINGVVDGKPLKGLKVD KVAGASWTSDAFNKALEVARQEASIQE
Sequences:
>Translated_187_residues MTEKNTLKKSATLAAAGLVVAGALLAGCGESKATPMDDAYAGNSGETEKSQEEQSQSQSNGSDSSDGSDSGSSHNDPSTT TSDKKDTGNYKDGNYSINGQYGPVGEDSIDVHLTIKDGNVETVKIIGHPFTTISKNHQDDFAKAINGVVDGKPLKGLKVD KVAGASWTSDAFNKALEVARQEASIQE >Mature_186_residues TEKNTLKKSATLAAAGLVVAGALLAGCGESKATPMDDAYAGNSGETEKSQEEQSQSQSNGSDSSDGSDSGSSHNDPSTTT SDKKDTGNYKDGNYSINGQYGPVGEDSIDVHLTIKDGNVETVKIIGHPFTTISKNHQDDFAKAINGVVDGKPLKGLKVDK VAGASWTSDAFNKALEVARQEASIQE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19456; Mature: 19325
Theoretical pI: Translated: 4.55; Mature: 4.55
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTEKNTLKKSATLAAAGLVVAGALLAGCGESKATPMDDAYAGNSGETEKSQEEQSQSQSN CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCC GSDSSDGSDSGSSHNDPSTTTSDKKDTGNYKDGNYSINGQYGPVGEDSIDVHLTIKDGNV CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCEEEEEEEECCCE ETVKIIGHPFTTISKNHQDDFAKAINGVVDGKPLKGLKVDKVAGASWTSDAFNKALEVAR EEEEEECCCCHHCCCCCHHHHHHHHHHCCCCCCCCCCEECCCCCCCCCHHHHHHHHHHHH QEASIQE HHHCCCC >Mature Secondary Structure TEKNTLKKSATLAAAGLVVAGALLAGCGESKATPMDDAYAGNSGETEKSQEEQSQSQSN CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCC GSDSSDGSDSGSSHNDPSTTTSDKKDTGNYKDGNYSINGQYGPVGEDSIDVHLTIKDGNV CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCEEEEEEEECCCE ETVKIIGHPFTTISKNHQDDFAKAINGVVDGKPLKGLKVDKVAGASWTSDAFNKALEVAR EEEEEECCCCHHCCCCCHHHHHHHHHHCCCCCCCCCCEECCCCCCCCCHHHHHHHHHHHH QEASIQE HHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA