Definition Bifidobacterium longum subsp. infantis ATCC 15697, complete genome.
Accession NC_011593
Length 2,832,748

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The map label for this gene is 213691105

Identifier: 213691105

GI number: 213691105

Start: 218881

End: 220302

Strand: Direct

Name: 213691105

Synonym: Blon_0184

Alternate gene names: NA

Gene position: 218881-220302 (Clockwise)

Preceding gene: 213691104

Following gene: 213691107

Centisome position: 7.73

GC content: 47.89

Gene sequence:

>1422_bases
TTGACTCCTGACGAATTGAAATCGAAAATCGTCCAAGGCGAAGGTGTCTCTCAGGAATTCAAGCGTTGCGGTTCGTTTCC
GGAGTCGGATACTTTTGAGACAATATGTTCGTTCGCGAATCGGCAAGGTGGCAGTATTTTCCTAGGTGTCAGCGATGACG
GAGAGATTCGCGGAGTTAATCGTCGAATCGTTCGTGATATCGAACGCAATATTGCAAATGTGACGTGCAATCCGAATGTA
TTTGATCCAGCACCAGCGTTCGAGTCTGAGCGCATAGATATCGGTGAGGAATTGGTTCTTAGAATCTGGGTACCTGCGGG
GCCGTCAGTCTACCGATACAAGAACGTGGTGTATGATCGCCGCGCCGACGCCGATATCCGTGTTCGTGATGATTCTCAGA
TTTCGCTGATGTATTTGCGTAAGCAGAGCATCTACTCTGAGCGACGCATTTATCCATATGTAACAGTTGAGGATTTGCGC
CAGGATCTGATTGAACGAACATACGATCTCATTCGTTTGCGAGACCCGAATCATCCTTGGCTCGCATTGGATTGCGACCA
CATGCTTCGCGCGGCAAAATTATATAGCCGCGATCGGCAAACAGGCGAGCAGGGCTTAACTCTTGCTTCTGTATTATTGC
TGGGAACTGATGAAGTTATTGGCGACGTATGTCCTGCATATAAGACTGATGCGCTAGTTCGCCGGCGCAATGTTGATCGA
TATGATGACAGGTTGACGGTGTCCACCAATCTGCTTGATGCATACGATCAACTTACAGCCTTCGCCCATGCGCAAATGCC
GGATACATTCATATTGGAGAATGACATTCGGGTAAGTGCGCGTAATATTATTTGCCGCGAATTGATTTCCAATCTGTTGA
TTCATCGAGAATACACGAATCCATTCATCGCTCGTTTGGTAATTGACAATGACGGTATTCGTACTGAAAATGCCAGTCGT
GCCTTGTTCGAGGGGCGCGTTACTCTGGACGACTTCAATCCTATGCCGAAAAATCCGATCATTGCGGGGTTCTTCACACA
AATAGGTCGTGCGGATGATTTAGGCAGCGGAACACGGAATATATACCGATATTCTCGTTTGTATTCCGGCAAGGAGCCTG
TGCTTGAAGATGGTGATGTGTTCAAGGCATTCGTTCCCGTTCCCAATGGAGCATCTGGGATTGGACACACTGAGAGTGTT
CTTAGTCGCAGAGTTCAGGTAGACGTTGCGCAGAGTGTCGATACTGTCGATGAAACGATTGCAAGGCTATTGGCGGAGCA
TGGAACAGTATCAAGTGCTGAGGTTGCTCAAGAGGCACAGGTCACTGTCCGTACTGCTTTGCGTCATTTGACCAAACTGA
CACAATCCGGACTAATATGCGCAGAAGGAGAAAACCGTAACAGGAGATATCGATTAGCGTAG

Upstream 100 bases:

>100_bases
GAGCCCTTGATCTGCTTGAAGCCAGATATGTTGGCATGTTATCGGACATGTCCGATAACATGTCCGATAACATGTCCGAT
AATGCTGAAGGTGGCAAATA

Downstream 100 bases:

>100_bases
GTGTTTTTGCAGTGAACATACGTTGATTGCGTGTGAAGCCTCGTGATATGGGCTGTCGAACGAAGTGAGACTGGGGGAGA
GATTTCCGTACGTAATCTCT

Product: transcriptional regulator

Products: NA

Alternate protein names: ATP-Dependent DNA Helicase RecG; Divergent AAA Domain Protein; ATPase; Divergent AAA ATPase; Divergent AAA Domain-Containing Protein; ATP-Dependent DNA Helicase

Number of amino acids: Translated: 473; Mature: 472

Protein sequence:

>473_residues
MTPDELKSKIVQGEGVSQEFKRCGSFPESDTFETICSFANRQGGSIFLGVSDDGEIRGVNRRIVRDIERNIANVTCNPNV
FDPAPAFESERIDIGEELVLRIWVPAGPSVYRYKNVVYDRRADADIRVRDDSQISLMYLRKQSIYSERRIYPYVTVEDLR
QDLIERTYDLIRLRDPNHPWLALDCDHMLRAAKLYSRDRQTGEQGLTLASVLLLGTDEVIGDVCPAYKTDALVRRRNVDR
YDDRLTVSTNLLDAYDQLTAFAHAQMPDTFILENDIRVSARNIICRELISNLLIHREYTNPFIARLVIDNDGIRTENASR
ALFEGRVTLDDFNPMPKNPIIAGFFTQIGRADDLGSGTRNIYRYSRLYSGKEPVLEDGDVFKAFVPVPNGASGIGHTESV
LSRRVQVDVAQSVDTVDETIARLLAEHGTVSSAEVAQEAQVTVRTALRHLTKLTQSGLICAEGENRNRRYRLA

Sequences:

>Translated_473_residues
MTPDELKSKIVQGEGVSQEFKRCGSFPESDTFETICSFANRQGGSIFLGVSDDGEIRGVNRRIVRDIERNIANVTCNPNV
FDPAPAFESERIDIGEELVLRIWVPAGPSVYRYKNVVYDRRADADIRVRDDSQISLMYLRKQSIYSERRIYPYVTVEDLR
QDLIERTYDLIRLRDPNHPWLALDCDHMLRAAKLYSRDRQTGEQGLTLASVLLLGTDEVIGDVCPAYKTDALVRRRNVDR
YDDRLTVSTNLLDAYDQLTAFAHAQMPDTFILENDIRVSARNIICRELISNLLIHREYTNPFIARLVIDNDGIRTENASR
ALFEGRVTLDDFNPMPKNPIIAGFFTQIGRADDLGSGTRNIYRYSRLYSGKEPVLEDGDVFKAFVPVPNGASGIGHTESV
LSRRVQVDVAQSVDTVDETIARLLAEHGTVSSAEVAQEAQVTVRTALRHLTKLTQSGLICAEGENRNRRYRLA
>Mature_472_residues
TPDELKSKIVQGEGVSQEFKRCGSFPESDTFETICSFANRQGGSIFLGVSDDGEIRGVNRRIVRDIERNIANVTCNPNVF
DPAPAFESERIDIGEELVLRIWVPAGPSVYRYKNVVYDRRADADIRVRDDSQISLMYLRKQSIYSERRIYPYVTVEDLRQ
DLIERTYDLIRLRDPNHPWLALDCDHMLRAAKLYSRDRQTGEQGLTLASVLLLGTDEVIGDVCPAYKTDALVRRRNVDRY
DDRLTVSTNLLDAYDQLTAFAHAQMPDTFILENDIRVSARNIICRELISNLLIHREYTNPFIARLVIDNDGIRTENASRA
LFEGRVTLDDFNPMPKNPIIAGFFTQIGRADDLGSGTRNIYRYSRLYSGKEPVLEDGDVFKAFVPVPNGASGIGHTESVL
SRRVQVDVAQSVDTVDETIARLLAEHGTVSSAEVAQEAQVTVRTALRHLTKLTQSGLICAEGENRNRRYRLA

Specific function: Unknown

COG id: COG2865

COG function: function code K; Predicted transcriptional regulator containing an HTH domain and an uncharacterized domain shared with the mammalian protein Schlafen

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 53483; Mature: 53352

Theoretical pI: Translated: 5.42; Mature: 5.42

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTPDELKSKIVQGEGVSQEFKRCGSFPESDTFETICSFANRQGGSIFLGVSDDGEIRGVN
CCHHHHHHHHHCCCCCHHHHHHHCCCCCCCHHHHHHHHHCCCCCEEEEEECCCCCEECHH
RRIVRDIERNIANVTCNPNVFDPAPAFESERIDIGEELVLRIWVPAGPSVYRYKNVVYDR
HHHHHHHHHHHCEEECCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCHHHHHHHHHCC
RADADIRVRDDSQISLMYLRKQSIYSERRIYPYVTVEDLRQDLIERTYDLIRLRDPNHPW
CCCCEEEECCCCCEEEEEHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHHEEEEECCCCCE
LALDCDHMLRAAKLYSRDRQTGEQGLTLASVLLLGTDEVIGDVCPAYKTDALVRRRNVDR
EEECHHHHHHHHHHHHHHHHCCHHCHHHHHHHHHCCHHHHHHHCCCHHHHHHHHHCCCCH
YDDRLTVSTNLLDAYDQLTAFAHAQMPDTFILENDIRVSARNIICRELISNLLIHREYTN
HCCEEEEEHHHHHHHHHHHHHHHCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHCCCC
PFIARLVIDNDGIRTENASRALFEGRVTLDDFNPMPKNPIIAGFFTQIGRADDLGSGTRN
CEEEEEEECCCCCCCCCCCHHHHCCCEEECCCCCCCCCCEEEHHHHHCCCCCCCCCCHHH
IYRYSRLYSGKEPVLEDGDVFKAFVPVPNGASGIGHTESVLSRRVQVDVAQSVDTVDETI
HHHHHHHHCCCCCCCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
ARLLAEHGTVSSAEVAQEAQVTVRTALRHLTKLTQSGLICAEGENRNRRYRLA
HHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCCEEECC
>Mature Secondary Structure 
TPDELKSKIVQGEGVSQEFKRCGSFPESDTFETICSFANRQGGSIFLGVSDDGEIRGVN
CHHHHHHHHHCCCCCHHHHHHHCCCCCCCHHHHHHHHHCCCCCEEEEEECCCCCEECHH
RRIVRDIERNIANVTCNPNVFDPAPAFESERIDIGEELVLRIWVPAGPSVYRYKNVVYDR
HHHHHHHHHHHCEEECCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCHHHHHHHHHCC
RADADIRVRDDSQISLMYLRKQSIYSERRIYPYVTVEDLRQDLIERTYDLIRLRDPNHPW
CCCCEEEECCCCCEEEEEHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHHEEEEECCCCCE
LALDCDHMLRAAKLYSRDRQTGEQGLTLASVLLLGTDEVIGDVCPAYKTDALVRRRNVDR
EEECHHHHHHHHHHHHHHHHCCHHCHHHHHHHHHCCHHHHHHHCCCHHHHHHHHHCCCCH
YDDRLTVSTNLLDAYDQLTAFAHAQMPDTFILENDIRVSARNIICRELISNLLIHREYTN
HCCEEEEEHHHHHHHHHHHHHHHCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHCCCC
PFIARLVIDNDGIRTENASRALFEGRVTLDDFNPMPKNPIIAGFFTQIGRADDLGSGTRN
CEEEEEEECCCCCCCCCCCHHHHCCCEEECCCCCCCCCCEEEHHHHHCCCCCCCCCCHHH
IYRYSRLYSGKEPVLEDGDVFKAFVPVPNGASGIGHTESVLSRRVQVDVAQSVDTVDETI
HHHHHHHHCCCCCCCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
ARLLAEHGTVSSAEVAQEAQVTVRTALRHLTKLTQSGLICAEGENRNRRYRLA
HHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCCEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA