| Definition | Bifidobacterium longum subsp. infantis ATCC 15697, complete genome. |
|---|---|
| Accession | NC_011593 |
| Length | 2,832,748 |
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The map label for this gene is yxkA [H]
Identifier: 213691100
GI number: 213691100
Start: 213333
End: 213887
Strand: Direct
Name: yxkA [H]
Synonym: Blon_0179
Alternate gene names: 213691100
Gene position: 213333-213887 (Clockwise)
Preceding gene: 213691099
Following gene: 213691101
Centisome position: 7.53
GC content: 60.36
Gene sequence:
>555_bases ATGAAGATTTCCGCCGATTTCACCGTCATTCCGGACGATTTCGCCAAGGCCGCGGCCCCTGAATATTTCAATGGTGGCGT GCCTGTGGTCTCCTTCCCGTTCTACATCGATGATGTGAGCCCCGAAGCTCGTTACCTGCACTGGGAGTTCGTGGATCCGG ATTCGATTCCGGTCTGCGGTTTCGAGTGGATTCACTGGTCCGTGGCCAACCTGCCCATCGGCGCGCTGATGTACGACTTC AACGACTCACATGCGCTGGCCATCCCGCCGGACTTCTCCCGCCAGCTGCCAGCCATGATTCCGGAGACCGTGCAAGGCCG CAATTCTTCGGCCTCCAAGTTCCTTGGTCGTAGCACTGACCCGGCCGTGATTATGCGGTACAACGGACCGCAGCCGCCGG ACAAGGATCATGAGTATTACCTGCAGGTGTGGGCCACCAAGAAGCCGCTTCCCGGATTGAACCAGGGATTCTGGCTCAAC GAACTGCTGCACGCGCTGCGTGCCAGCGGCGAGACGCCCGACACCGACGGCGTCTTCCTGACCGGCAAGGCGTGA
Upstream 100 bases:
>100_bases GAGGCCCTCAGTCGTGTTTGGCTATCACCATGTATTGTGATGGCGTTTTGAGTTGCCGCAGACTGAAATCTGCAACATGG CTCGCGATACACTGGTGGGT
Downstream 100 bases:
>100_bases GCCACATGAGCCCCCGCAGGCGGGGGCTGTCAGCATCACTGACTGAGGGGCGGGTCAGTACAGAACCTCCTTCAGTCCGA CTTCGTCGTTCAGCTCCCGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 184; Mature: 184
Protein sequence:
>184_residues MKISADFTVIPDDFAKAAAPEYFNGGVPVVSFPFYIDDVSPEARYLHWEFVDPDSIPVCGFEWIHWSVANLPIGALMYDF NDSHALAIPPDFSRQLPAMIPETVQGRNSSASKFLGRSTDPAVIMRYNGPQPPDKDHEYYLQVWATKKPLPGLNQGFWLN ELLHALRASGETPDTDGVFLTGKA
Sequences:
>Translated_184_residues MKISADFTVIPDDFAKAAAPEYFNGGVPVVSFPFYIDDVSPEARYLHWEFVDPDSIPVCGFEWIHWSVANLPIGALMYDF NDSHALAIPPDFSRQLPAMIPETVQGRNSSASKFLGRSTDPAVIMRYNGPQPPDKDHEYYLQVWATKKPLPGLNQGFWLN ELLHALRASGETPDTDGVFLTGKA >Mature_184_residues MKISADFTVIPDDFAKAAAPEYFNGGVPVVSFPFYIDDVSPEARYLHWEFVDPDSIPVCGFEWIHWSVANLPIGALMYDF NDSHALAIPPDFSRQLPAMIPETVQGRNSSASKFLGRSTDPAVIMRYNGPQPPDKDHEYYLQVWATKKPLPGLNQGFWLN ELLHALRASGETPDTDGVFLTGKA
Specific function: Unknown
COG id: COG1881
COG function: function code R; Phospholipid-binding protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008914 - InterPro: IPR005247 [H]
Pfam domain/function: PF01161 PBP [H]
EC number: NA
Molecular weight: Translated: 20487; Mature: 20487
Theoretical pI: Translated: 4.54; Mature: 4.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKISADFTVIPDDFAKAAAPEYFNGGVPVVSFPFYIDDVSPEARYLHWEFVDPDSIPVCG CEECCCEEECCCHHHHHCCCCHHCCCCCEEECCEEEECCCCCCEEEEEEEECCCCCCCCC FEWIHWSVANLPIGALMYDFNDSHALAIPPDFSRQLPAMIPETVQGRNSSASKFLGRSTD CHHEEEECCCCCEEEEEEECCCCCEEEECCCCCCCCCCCCCHHHCCCCCCHHHHCCCCCC PAVIMRYNGPQPPDKDHEYYLQVWATKKPLPGLNQGFWLNELLHALRASGETPDTDGVFL CEEEEEECCCCCCCCCCEEEEEEEECCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCEEE TGKA EECC >Mature Secondary Structure MKISADFTVIPDDFAKAAAPEYFNGGVPVVSFPFYIDDVSPEARYLHWEFVDPDSIPVCG CEECCCEEECCCHHHHHCCCCHHCCCCCEEECCEEEECCCCCCEEEEEEEECCCCCCCCC FEWIHWSVANLPIGALMYDFNDSHALAIPPDFSRQLPAMIPETVQGRNSSASKFLGRSTD CHHEEEECCCCCEEEEEEECCCCCEEEECCCCCCCCCCCCCHHHCCCCCCHHHHCCCCCC PAVIMRYNGPQPPDKDHEYYLQVWATKKPLPGLNQGFWLNELLHALRASGETPDTDGVFL CEEEEEECCCCCCCCCCEEEEEEEECCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCEEE TGKA EECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8978088; 8969509; 9384377 [H]