Click here to switch to the map view.

The map label for this gene is 213691080

Identifier: 213691080

GI number: 213691080

Start: 186725

End: 187324

Strand: Reverse

Name: 213691080

Synonym: Blon_0159

Alternate gene names: NA

Gene position: 187324-186725 (Counterclockwise)

Preceding gene: 213691083

Following gene: 213691060

Centisome position: 6.61

GC content: 54.67

Gene sequence:

>600_bases
ATGAGCGATATCCTCGACGAGAAACGCCCCACCCGTGGCGATGCCCGGCGCGACGCCATCGTGCAAGCCGCGCGCAAAGT
GTGTCTGGAAAAAGGCTTCTCCAAAATCACCGTTTCCGACATCGCAAGCGAAGTCGGTATGACGCGTTCACTGTTCTACC
ATTACTTCGAAGACAAGGAAGCCGTAGCAGACGCAGTACTCGACGACGTCATCGACGAAATCCTCACCACATTGAAGCAG
TGGAACCAAGCGCGCGAAACAGGCAACGTGAACAAGGCATTAGACGACATCGTGCGCGTGCTCCGTTCCCTGATCGCCGA
CGAGAGCCCCTTTTCGAACCGTATGATCCAAGATGGCAACGCCGAACTGTATATCAAGTTCATTGACCGCGCGGCGGACC
GTATTGCCGACTACATTGCCCAGACCACCGTACGTGATTTCGAGCAGATGCATGGTCTGCCAATCACCAACGTCCATGAG
ACATTCTTCACGCTAATCGTGGGGCTTATCTCGCTGGTTCGCTCGCATCCGAACATCAGCGACCGAACCATCAAAGAGGT
CATGGCGCAGACGCTGCATATCGAAAACTATGTCGTCTGA

Upstream 100 bases:

>100_bases
AACGACATTCATCTGACAACGGTTACCGCATTTTTATTGTTATTAACCGCTTTCTTTGTATTAACATAGTGTCAATAACG
GTTGTAGTCAGGAGGTACCC

Downstream 100 bases:

>100_bases
AGTCTGACGGCCATTGGCTCTGGTACCGCTCTCCCGTACTCCCCTCAGTCCGCTTCGCGGCCAGCTCGTCCGCAATTGCG
AACAGCCTACGGCTGACTCT

Product: transcriptional regulator, TetR family

Products: NA

Alternate protein names: TetR-Type Transcriptional Regulator; Transcriptional Regulator

Number of amino acids: Translated: 199; Mature: 198

Protein sequence:

>199_residues
MSDILDEKRPTRGDARRDAIVQAARKVCLEKGFSKITVSDIASEVGMTRSLFYHYFEDKEAVADAVLDDVIDEILTTLKQ
WNQARETGNVNKALDDIVRVLRSLIADESPFSNRMIQDGNAELYIKFIDRAADRIADYIAQTTVRDFEQMHGLPITNVHE
TFFTLIVGLISLVRSHPNISDRTIKEVMAQTLHIENYVV

Sequences:

>Translated_199_residues
MSDILDEKRPTRGDARRDAIVQAARKVCLEKGFSKITVSDIASEVGMTRSLFYHYFEDKEAVADAVLDDVIDEILTTLKQ
WNQARETGNVNKALDDIVRVLRSLIADESPFSNRMIQDGNAELYIKFIDRAADRIADYIAQTTVRDFEQMHGLPITNVHE
TFFTLIVGLISLVRSHPNISDRTIKEVMAQTLHIENYVV
>Mature_198_residues
SDILDEKRPTRGDARRDAIVQAARKVCLEKGFSKITVSDIASEVGMTRSLFYHYFEDKEAVADAVLDDVIDEILTTLKQW
NQARETGNVNKALDDIVRVLRSLIADESPFSNRMIQDGNAELYIKFIDRAADRIADYIAQTTVRDFEQMHGLPITNVHET
FFTLIVGLISLVRSHPNISDRTIKEVMAQTLHIENYVV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22615; Mature: 22484

Theoretical pI: Translated: 4.96; Mature: 4.96

Prosite motif: PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDILDEKRPTRGDARRDAIVQAARKVCLEKGFSKITVSDIASEVGMTRSLFYHYFEDKE
CCCCHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
AVADAVLDDVIDEILTTLKQWNQARETGNVNKALDDIVRVLRSLIADESPFSNRMIQDGN
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHCCCC
AELYIKFIDRAADRIADYIAQTTVRDFEQMHGLPITNVHETFFTLIVGLISLVRSHPNIS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCC
DRTIKEVMAQTLHIENYVV
HHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SDILDEKRPTRGDARRDAIVQAARKVCLEKGFSKITVSDIASEVGMTRSLFYHYFEDKE
CCCHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
AVADAVLDDVIDEILTTLKQWNQARETGNVNKALDDIVRVLRSLIADESPFSNRMIQDGN
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHCCCC
AELYIKFIDRAADRIADYIAQTTVRDFEQMHGLPITNVHETFFTLIVGLISLVRSHPNIS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCC
DRTIKEVMAQTLHIENYVV
HHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA