| Definition | Bifidobacterium longum subsp. infantis ATCC 15697, complete genome. |
|---|---|
| Accession | NC_011593 |
| Length | 2,832,748 |
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The map label for this gene is phoA [H]
Identifier: 213691061
GI number: 213691061
Start: 166830
End: 168908
Strand: Direct
Name: phoA [H]
Synonym: Blon_0140
Alternate gene names: 213691061
Gene position: 166830-168908 (Clockwise)
Preceding gene: 213691057
Following gene: 213691062
Centisome position: 5.89
GC content: 66.62
Gene sequence:
>2079_bases ATGGGCAATCACAAGGCTTTGACGAGCGCCGTAGCGGCGATCGCCTCCATTGCGACGCTCGGCGCGCTCGCCGCTCCGGC GTTTGCTGTCGATGCCGCGAACGGCACCTACAGCCCCAACGGCAAGTCGGTCGCCGAGCTCGCCAAGCACGGCGCGGCGC AGCGCATCGCCGCCATCGGCAACAAGAGCGCGAAGAACGTCGTGCTGTTCATCGGCGACGGCATGGGCGATTCGGAAATC ACCATCGCCCGCGACTATCTGAAAGGCGCCAACGGCCACTTCGATGGTCTGGACGCGGTCGGTCAGCCCGGCGCGCTTGA CGACGTGCAGGCGGGCACCGGTCAGTACACGACCTTCTCGCTCGGCGACGGCAGCAAGGACAGCGCCGTCGGCAAGGATG CCGCCGGCAAGCTGGTCGCCAACCCCAACCCGGGCAAGCTCACCCCCGTCACCGATTCCTCCGCGTCCGGTTCCGCATGG GCGACCGGCACCAAGACCTACAACAACGCCGTCGACGTCGACATCTACGGCAACCCGCAGCTGAATCTCTTCGAGCTGGC CAAGGCCGCCGGCAAGGCCACCGGCAACGTGTCCACCGCGGAAATCCAGGACGCCACCCCGGCCGTGCTGGAATCGCACT CCACCGAGCGTGCCTGCTACGGCCCGCAGGGCAAGACCGACGGCACTTCCAACAACGCCTCCAAACAGTGCCTCGCCAAC CAGCTCAAGGAGAATGGCGGCATCGGCTCCATCTCCGAGCAGCTGCTCGACACCCGCGCCGATGTGACCATCGGCGGTGG TTCCAAGTACTTCCGCCAGACCGTGCAGGGCGGCGAATACAAGGGCAAGACCGTGTGGGAGCAGGCCAAGGACATGGGCT TCCAGACCGTTGAGAACGACCCGGCCGCGATGAACGCCCTGCAGTACAAGGATGGCCAGCCGGTGCTCGCCCTGATGAGC GACGGCAACATGCCGACCAAGTTCAACCCGTCCAAGGCCACCGCCAAGGATCCGGCCAAGGACGCCAACCCGACCGTGTG CACCCCGAATGACGCCTGGCTCGGCAACCGTGGCGCCTCGCTCAAGGACATGACCAAGAAGGCGCTCGATCTGCTCAACG CCAACCCGAACGGTCAGAAGAACGGCTTCCTCCTGCAGGTCGAAGGCGCTTCGATCGATAAGCAGGACCACGCCGCCAAC GCCTGCGGCCAGATCGGCGAGACCGACGACTTCGACCAGGCCATCGCCTACGCCATCAAGAACGTGGACCTCACGAACAC GCTGGTGATCGTCACCGCCGATCATGCGCACACCTCCCAGGTCCTCAACGCCCAGCCGGCCTACGCGCTGTCCACCGTGC TCAAGTCCGCCGACGGCAACAACATGGTCGTCTCCTACGGCACCGCCCAGGCAGCCTCCACCGACGCCGAAGGCGGCTAC AACGGCGGCGACATGGAGCACACCGGCACCCAGCTGCGCATCGCCGCTTCCGGCCCCGGCGCCCAGCGCGTCATCGGCCT GACCGATCAGACCGACAACTTCTACACCATCGCCGGCGCCCTGGGCCTGGCCACCTCCCCCGACGAGCAGAACGCGCTCT CCAAGGATGGCACCGTGAAGGTCGCCCGCACGCAGGCCGGCAAGTACGTCGCCAATGTCGACGGGTTCAACGGCGACGCG CTGCTCAGCTACGAGCTGAAGGACAAGAACGGCGCCGTGGTGTCCAAGTCCGATTCCAGCACCCCGTTGTCCGGCGTGCG CGTCAAGCCCGCGCAGACCACTTCGATCGCGCTCGACAAGATGTCGGAAGGCGCCGAGTACACGCTCACCGTCACCGGTC GCCAGTCCGGCAAGGTCGCGACCGTCGCCATCCAGGCGCCGGCCGCCGGCTCCGCCGACAAGAAGCCGGGCGCCGACAAG AACGGCGTGATCGCTTCGGGCAAGGTGCCGAACGATTCCGCGGTCTCCGGCCCGCTGGGCGCCACCGGTACCGCCGTCAT GGCCATCGCCATCGCGGCTGTGATGCTGGTTGCGATCGCGATGCTCATTAAGGCCGCGCGTAACGCCAGGAACAACTGA
Upstream 100 bases:
>100_bases AGCTGGAAGGCGTGACGACGACGGACGTGGCCAAACGGGTGCGGCCGGAGGAGTGCGGGCCGGACGGCGCAGATGACACT GCATGGAAGAAGGAAGAACA
Downstream 100 bases:
>100_bases TTCGGCCTTGGTCGACCGGTAATCCCGAGTCGTCCAGCCGCCGGAAAACCATCGCCCGCCGAGCCGATGCCCGGCGGGCG ATCGTTTTCCGGCGGCTTTT
Product: alkaline phosphatase
Products: NA
Alternate protein names: APase [H]
Number of amino acids: Translated: 692; Mature: 691
Protein sequence:
>692_residues MGNHKALTSAVAAIASIATLGALAAPAFAVDAANGTYSPNGKSVAELAKHGAAQRIAAIGNKSAKNVVLFIGDGMGDSEI TIARDYLKGANGHFDGLDAVGQPGALDDVQAGTGQYTTFSLGDGSKDSAVGKDAAGKLVANPNPGKLTPVTDSSASGSAW ATGTKTYNNAVDVDIYGNPQLNLFELAKAAGKATGNVSTAEIQDATPAVLESHSTERACYGPQGKTDGTSNNASKQCLAN QLKENGGIGSISEQLLDTRADVTIGGGSKYFRQTVQGGEYKGKTVWEQAKDMGFQTVENDPAAMNALQYKDGQPVLALMS DGNMPTKFNPSKATAKDPAKDANPTVCTPNDAWLGNRGASLKDMTKKALDLLNANPNGQKNGFLLQVEGASIDKQDHAAN ACGQIGETDDFDQAIAYAIKNVDLTNTLVIVTADHAHTSQVLNAQPAYALSTVLKSADGNNMVVSYGTAQAASTDAEGGY NGGDMEHTGTQLRIAASGPGAQRVIGLTDQTDNFYTIAGALGLATSPDEQNALSKDGTVKVARTQAGKYVANVDGFNGDA LLSYELKDKNGAVVSKSDSSTPLSGVRVKPAQTTSIALDKMSEGAEYTLTVTGRQSGKVATVAIQAPAAGSADKKPGADK NGVIASGKVPNDSAVSGPLGATGTAVMAIAIAAVMLVAIAMLIKAARNARNN
Sequences:
>Translated_692_residues MGNHKALTSAVAAIASIATLGALAAPAFAVDAANGTYSPNGKSVAELAKHGAAQRIAAIGNKSAKNVVLFIGDGMGDSEI TIARDYLKGANGHFDGLDAVGQPGALDDVQAGTGQYTTFSLGDGSKDSAVGKDAAGKLVANPNPGKLTPVTDSSASGSAW ATGTKTYNNAVDVDIYGNPQLNLFELAKAAGKATGNVSTAEIQDATPAVLESHSTERACYGPQGKTDGTSNNASKQCLAN QLKENGGIGSISEQLLDTRADVTIGGGSKYFRQTVQGGEYKGKTVWEQAKDMGFQTVENDPAAMNALQYKDGQPVLALMS DGNMPTKFNPSKATAKDPAKDANPTVCTPNDAWLGNRGASLKDMTKKALDLLNANPNGQKNGFLLQVEGASIDKQDHAAN ACGQIGETDDFDQAIAYAIKNVDLTNTLVIVTADHAHTSQVLNAQPAYALSTVLKSADGNNMVVSYGTAQAASTDAEGGY NGGDMEHTGTQLRIAASGPGAQRVIGLTDQTDNFYTIAGALGLATSPDEQNALSKDGTVKVARTQAGKYVANVDGFNGDA LLSYELKDKNGAVVSKSDSSTPLSGVRVKPAQTTSIALDKMSEGAEYTLTVTGRQSGKVATVAIQAPAAGSADKKPGADK NGVIASGKVPNDSAVSGPLGATGTAVMAIAIAAVMLVAIAMLIKAARNARNN >Mature_691_residues GNHKALTSAVAAIASIATLGALAAPAFAVDAANGTYSPNGKSVAELAKHGAAQRIAAIGNKSAKNVVLFIGDGMGDSEIT IARDYLKGANGHFDGLDAVGQPGALDDVQAGTGQYTTFSLGDGSKDSAVGKDAAGKLVANPNPGKLTPVTDSSASGSAWA TGTKTYNNAVDVDIYGNPQLNLFELAKAAGKATGNVSTAEIQDATPAVLESHSTERACYGPQGKTDGTSNNASKQCLANQ LKENGGIGSISEQLLDTRADVTIGGGSKYFRQTVQGGEYKGKTVWEQAKDMGFQTVENDPAAMNALQYKDGQPVLALMSD GNMPTKFNPSKATAKDPAKDANPTVCTPNDAWLGNRGASLKDMTKKALDLLNANPNGQKNGFLLQVEGASIDKQDHAANA CGQIGETDDFDQAIAYAIKNVDLTNTLVIVTADHAHTSQVLNAQPAYALSTVLKSADGNNMVVSYGTAQAASTDAEGGYN GGDMEHTGTQLRIAASGPGAQRVIGLTDQTDNFYTIAGALGLATSPDEQNALSKDGTVKVARTQAGKYVANVDGFNGDAL LSYELKDKNGAVVSKSDSSTPLSGVRVKPAQTTSIALDKMSEGAEYTLTVTGRQSGKVATVAIQAPAAGSADKKPGADKN GVIASGKVPNDSAVSGPLGATGTAVMAIAIAAVMLVAIAMLIKAARNARNN
Specific function: Unknown
COG id: COG1785
COG function: function code P; Alkaline phosphatase
Gene ontology:
Cell location: Periplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the alkaline phosphatase family [H]
Homologues:
Organism=Homo sapiens, GI94721246, Length=522, Percent_Identity=28.1609195402299, Blast_Score=110, Evalue=3e-24, Organism=Homo sapiens, GI157266296, Length=520, Percent_Identity=27.3076923076923, Blast_Score=103, Evalue=4e-22, Organism=Homo sapiens, GI157266292, Length=411, Percent_Identity=28.2238442822384, Blast_Score=94, Evalue=4e-19, Organism=Escherichia coli, GI48994877, Length=469, Percent_Identity=48.6140724946695, Blast_Score=380, Evalue=1e-106, Organism=Saccharomyces cerevisiae, GI6320689, Length=468, Percent_Identity=25.8547008547009, Blast_Score=94, Evalue=1e-19, Organism=Drosophila melanogaster, GI21355151, Length=506, Percent_Identity=23.3201581027668, Blast_Score=89, Evalue=1e-17, Organism=Drosophila melanogaster, GI18859923, Length=384, Percent_Identity=25, Blast_Score=86, Evalue=7e-17, Organism=Drosophila melanogaster, GI21355981, Length=405, Percent_Identity=24.4444444444444, Blast_Score=77, Evalue=5e-14, Organism=Drosophila melanogaster, GI24657835, Length=441, Percent_Identity=25.8503401360544, Blast_Score=77, Evalue=5e-14, Organism=Drosophila melanogaster, GI21358067, Length=521, Percent_Identity=24.9520153550864, Blast_Score=75, Evalue=2e-13,
Paralogues:
None
Copy number: 340 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017849 - InterPro: IPR001952 - InterPro: IPR018299 - InterPro: IPR017850 [H]
Pfam domain/function: PF00245 Alk_phosphatase [H]
EC number: =3.1.3.1 [H]
Molecular weight: Translated: 70606; Mature: 70475
Theoretical pI: Translated: 5.54; Mature: 5.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGNHKALTSAVAAIASIATLGALAAPAFAVDAANGTYSPNGKSVAELAKHGAAQRIAAIG CCCHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCHHHHHHHHCCHHHHHHHHC NKSAKNVVLFIGDGMGDSEITIARDYLKGANGHFDGLDAVGQPGALDDVQAGTGQYTTFS CCCCCEEEEEEECCCCCCCEEEEHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEE LGDGSKDSAVGKDAAGKLVANPNPGKLTPVTDSSASGSAWATGTKTYNNAVDVDIYGNPQ CCCCCCCCCCCCCCCCCEEECCCCCCEEECCCCCCCCCEEECCCCCCCCEEEEEEECCCC LNLFELAKAAGKATGNVSTAEIQDATPAVLESHSTERACYGPQGKTDGTSNNASKQCLAN CHHHHHHHHHCCCCCCCCEEEECCCCHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHH QLKENGGIGSISEQLLDTRADVTIGGGSKYFRQTVQGGEYKGKTVWEQAKDMGFQTVEND HHHHCCCCCHHHHHHHHCCCCEEECCCHHHHHHHHCCCCCCCCHHHHHHHHCCCEEECCC PAAMNALQYKDGQPVLALMSDGNMPTKFNPSKATAKDPAKDANPTVCTPNDAWLGNRGAS CHHHHHEEECCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCC LKDMTKKALDLLNANPNGQKNGFLLQVEGASIDKQDHAANACGQIGETDDFDQAIAYAIK HHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHH NVDLTNTLVIVTADHAHTSQVLNAQPAYALSTVLKSADGNNMVVSYGTAQAASTDAEGGY CCCCCCEEEEEEECCCHHHHHHCCCCHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCC NGGDMEHTGTQLRIAASGPGAQRVIGLTDQTDNFYTIAGALGLATSPDEQNALSKDGTVK CCCCCCCCCCEEEEEECCCCCCEEEEECCCCCCEEEEEEECCCCCCCCHHHCCCCCCCEE VARTQAGKYVANVDGFNGDALLSYELKDKNGAVVSKSDSSTPLSGVRVKPAQTTSIALDK EEEECCCCEEEECCCCCCCEEEEEEEECCCCCEEECCCCCCCCCCEEECCCCCHHHHHHH MSEGAEYTLTVTGRQSGKVATVAIQAPAAGSADKKPGADKNGVIASGKVPNDSAVSGPLG HCCCCEEEEEEECCCCCCEEEEEEECCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCC ATGTAVMAIAIAAVMLVAIAMLIKAARNARNN CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure GNHKALTSAVAAIASIATLGALAAPAFAVDAANGTYSPNGKSVAELAKHGAAQRIAAIG CCHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCHHHHHHHHCCHHHHHHHHC NKSAKNVVLFIGDGMGDSEITIARDYLKGANGHFDGLDAVGQPGALDDVQAGTGQYTTFS CCCCCEEEEEEECCCCCCCEEEEHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEE LGDGSKDSAVGKDAAGKLVANPNPGKLTPVTDSSASGSAWATGTKTYNNAVDVDIYGNPQ CCCCCCCCCCCCCCCCCEEECCCCCCEEECCCCCCCCCEEECCCCCCCCEEEEEEECCCC LNLFELAKAAGKATGNVSTAEIQDATPAVLESHSTERACYGPQGKTDGTSNNASKQCLAN CHHHHHHHHHCCCCCCCCEEEECCCCHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHH QLKENGGIGSISEQLLDTRADVTIGGGSKYFRQTVQGGEYKGKTVWEQAKDMGFQTVEND HHHHCCCCCHHHHHHHHCCCCEEECCCHHHHHHHHCCCCCCCCHHHHHHHHCCCEEECCC PAAMNALQYKDGQPVLALMSDGNMPTKFNPSKATAKDPAKDANPTVCTPNDAWLGNRGAS CHHHHHEEECCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCC LKDMTKKALDLLNANPNGQKNGFLLQVEGASIDKQDHAANACGQIGETDDFDQAIAYAIK HHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHH NVDLTNTLVIVTADHAHTSQVLNAQPAYALSTVLKSADGNNMVVSYGTAQAASTDAEGGY CCCCCCEEEEEEECCCHHHHHHCCCCHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCC NGGDMEHTGTQLRIAASGPGAQRVIGLTDQTDNFYTIAGALGLATSPDEQNALSKDGTVK CCCCCCCCCCEEEEEECCCCCCEEEEECCCCCCEEEEEEECCCCCCCCHHHCCCCCCCEE VARTQAGKYVANVDGFNGDALLSYELKDKNGAVVSKSDSSTPLSGVRVKPAQTTSIALDK EEEECCCCEEEECCCCCCCEEEEEEEECCCCCEEECCCCCCCCCCEEECCCCCHHHHHHH MSEGAEYTLTVTGRQSGKVATVAIQAPAAGSADKKPGADKNGVIASGKVPNDSAVSGPLG HCCCCEEEEEEECCCCCCEEEEEEECCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCC ATGTAVMAIAIAAVMLVAIAMLIKAARNARNN CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 2129542 [H]