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The map label for this gene is treA [H]

Identifier: 213691058

GI number: 213691058

Start: 160825

End: 162642

Strand: Reverse

Name: treA [H]

Synonym: Blon_0137

Alternate gene names: 213691058

Gene position: 162642-160825 (Counterclockwise)

Preceding gene: 213691059

Following gene: 213691055

Centisome position: 5.74

GC content: 66.17

Gene sequence:

>1818_bases
ATGACCGCAAATAATCTCAATGACGACTGGTGGAAGCAGGCCGTCGTCTACCAGATCTACCCGCGCAGCTTCAAGGACGT
CACCGGCGACGGACTCGGCGACATCGCCGGCGTCACCGAGAAGATGGACTACCTGAAGAGCCTCGGCGTCGACGCCATCT
GGCTCTCCCCGTTCTACCCCTCCGATCTGGCGGACGGCGGCTACGACGTGATCGACTACCGCAACGTCGACCCGCGACTG
GGCACCATGGACGACTTCGACGCGATGGCCAAGGCCGCGCACGAGGCCGACATCAAGGTGATCGTGGACATCGTACCCAA
TCACACCGCCGACAAGCACGTGTTCTTCCAGGAGGCCCTCGCCGCCGAGCCCGGCTCCCCCGCACGCGATCGCTACATCT
TCCGCGACGGCCGCGGCGAGCATGGCGAACTGCCCCCGAACGACTGGCAATCCTTCTTCGGCGGCCCGGCCTGGGCGCGC
GTGGCCGACGGCCAGTGGTATCTGCACCTGTTCGATAAGGCGCAGCCGGATGTCAACTGGAAGAATCCGGACATCCACGA
GGAGTTCAAGAAGACCCTGCGTTTCTGGTCCGACCACGGCACCGACGGCTTCCGCATCGACGTGGCGCACGGCCTGGCCA
AGGACCTCGAATCCAAGCCGTTGGAAGAGCTCGGCCGCGAATACAGCGTGGTCGGCGTGCTGAATCATGACTTCAGCCAC
CCGCTGTTCGACCGTCGCGAGGTGCACGATATCTACCGCGAATGGCGCAAGGTGTTCAACGAGTACAACCCGCCGCGCTT
TGCCGTGGCCGAGGCGTGGGTGGTGCCCGAGCACCAGCACCTGTACGCTTCGATGGACGAGCTGGGCCAGTCCTTCAACT
TCGACTTCGCGCAAGCCAACTGGTATGCCGACGAGTTCCGCGAGGCCATCGCCGCCGGACTCAAGGCGGCGGCCGAAACC
GGCGGTTCCACCACCACGTGGGTCATGAACAATCACGACGTGCCGCGCAGCCCCTCCCGTTACGGCCTGCCGCAGATCAA
GGGCGCGCCCTACCACCAGCTGCCGCACGACTGGCTGCTGCGCAACGGCACTACCTATCCCGAGGATCGCGAGCTTGGCA
CTCGCCGCGCCCGCGCCGCCGCTTTGATGGAGCTCGGCCTGCCCGGCGCCGCCTATATCTATCAGGGCGAGGAGCTGGGC
CTGTTTGAGGTGGCCGATATTCCGTGGGATCACTTGGAGGATCCGACCGCTTTCCACACTGCTCAGGCCACGATGGACAA
GGGCCGCGACGGCTGCCGCGTGCCGCTGCCGTGGACCGCCGCCGATGAGCCGGCCTTGGCCGATTTCAGCCGTCCGACTC
CGGCCGATGACGGTACCGGCGAGAACCATGTGCCGCTGTGCGCCGCCGGCCAGTTCGGCACGGGCGCTTCCTTCGGCTTC
TCGCCGGCTACGCGCGCTGAGGGCGTGACGCCGGCCGCCGACCCGCACCTGCCGCAACCGCTGTGGTTCAAGGATTACGC
GGTGGACGTGGAGCAAGCCGACCCGGACTCGATGCTCGCGCTGTATCGCGCCGCACTGGCGATTCGCCAGGAGTCGCTGA
CCGCCACACGCGACACCACGGCCGAGCAGGTGGACATGGGCGACGATGTGGTGGCGTACACCCGCGCGGCGGTTGGCGGG
CGCACGTTCACATCGATCACCAATTTCGGCGATGACCCAGTTGTGCTACCCGAGGGCGATGTGGTGCTGGCGTCCGGCCC
GCTGACCCCCGATGGCCAACTCCCCACCGACACCTCGGCGTGGATCATCACACAATAA

Upstream 100 bases:

>100_bases
TCGTTGTCATCATCAATACAACGGTTGGGCCTTCACACAGCAGTTCGGGCGCGACCGGAACAACCCAACCACAACGCACC
CGGAACAGGAGGGAATCGGC

Downstream 100 bases:

>100_bases
GGCGCTTCCATGGGGTGGTAAATCTCTCATGGGGCGGTAATTTCCCCATGGGGCGGTTTGAAGGATTGGTGAAACCGCGG
AATTAAGCCATTTTGAAACA

Product: alpha amylase, catalytic region

Products: NA

Alternate protein names: Alpha,alpha-phosphotrehalase [H]

Number of amino acids: Translated: 605; Mature: 604

Protein sequence:

>605_residues
MTANNLNDDWWKQAVVYQIYPRSFKDVTGDGLGDIAGVTEKMDYLKSLGVDAIWLSPFYPSDLADGGYDVIDYRNVDPRL
GTMDDFDAMAKAAHEADIKVIVDIVPNHTADKHVFFQEALAAEPGSPARDRYIFRDGRGEHGELPPNDWQSFFGGPAWAR
VADGQWYLHLFDKAQPDVNWKNPDIHEEFKKTLRFWSDHGTDGFRIDVAHGLAKDLESKPLEELGREYSVVGVLNHDFSH
PLFDRREVHDIYREWRKVFNEYNPPRFAVAEAWVVPEHQHLYASMDELGQSFNFDFAQANWYADEFREAIAAGLKAAAET
GGSTTTWVMNNHDVPRSPSRYGLPQIKGAPYHQLPHDWLLRNGTTYPEDRELGTRRARAAALMELGLPGAAYIYQGEELG
LFEVADIPWDHLEDPTAFHTAQATMDKGRDGCRVPLPWTAADEPALADFSRPTPADDGTGENHVPLCAAGQFGTGASFGF
SPATRAEGVTPAADPHLPQPLWFKDYAVDVEQADPDSMLALYRAALAIRQESLTATRDTTAEQVDMGDDVVAYTRAAVGG
RTFTSITNFGDDPVVLPEGDVVLASGPLTPDGQLPTDTSAWIITQ

Sequences:

>Translated_605_residues
MTANNLNDDWWKQAVVYQIYPRSFKDVTGDGLGDIAGVTEKMDYLKSLGVDAIWLSPFYPSDLADGGYDVIDYRNVDPRL
GTMDDFDAMAKAAHEADIKVIVDIVPNHTADKHVFFQEALAAEPGSPARDRYIFRDGRGEHGELPPNDWQSFFGGPAWAR
VADGQWYLHLFDKAQPDVNWKNPDIHEEFKKTLRFWSDHGTDGFRIDVAHGLAKDLESKPLEELGREYSVVGVLNHDFSH
PLFDRREVHDIYREWRKVFNEYNPPRFAVAEAWVVPEHQHLYASMDELGQSFNFDFAQANWYADEFREAIAAGLKAAAET
GGSTTTWVMNNHDVPRSPSRYGLPQIKGAPYHQLPHDWLLRNGTTYPEDRELGTRRARAAALMELGLPGAAYIYQGEELG
LFEVADIPWDHLEDPTAFHTAQATMDKGRDGCRVPLPWTAADEPALADFSRPTPADDGTGENHVPLCAAGQFGTGASFGF
SPATRAEGVTPAADPHLPQPLWFKDYAVDVEQADPDSMLALYRAALAIRQESLTATRDTTAEQVDMGDDVVAYTRAAVGG
RTFTSITNFGDDPVVLPEGDVVLASGPLTPDGQLPTDTSAWIITQ
>Mature_604_residues
TANNLNDDWWKQAVVYQIYPRSFKDVTGDGLGDIAGVTEKMDYLKSLGVDAIWLSPFYPSDLADGGYDVIDYRNVDPRLG
TMDDFDAMAKAAHEADIKVIVDIVPNHTADKHVFFQEALAAEPGSPARDRYIFRDGRGEHGELPPNDWQSFFGGPAWARV
ADGQWYLHLFDKAQPDVNWKNPDIHEEFKKTLRFWSDHGTDGFRIDVAHGLAKDLESKPLEELGREYSVVGVLNHDFSHP
LFDRREVHDIYREWRKVFNEYNPPRFAVAEAWVVPEHQHLYASMDELGQSFNFDFAQANWYADEFREAIAAGLKAAAETG
GSTTTWVMNNHDVPRSPSRYGLPQIKGAPYHQLPHDWLLRNGTTYPEDRELGTRRARAAALMELGLPGAAYIYQGEELGL
FEVADIPWDHLEDPTAFHTAQATMDKGRDGCRVPLPWTAADEPALADFSRPTPADDGTGENHVPLCAAGQFGTGASFGFS
PATRAEGVTPAADPHLPQPLWFKDYAVDVEQADPDSMLALYRAALAIRQESLTATRDTTAEQVDMGDDVVAYTRAAVGGR
TFTSITNFGDDPVVLPEGDVVLASGPLTPDGQLPTDTSAWIITQ

Specific function: Unknown

COG id: COG0366

COG function: function code G; Glycosidases

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyl hydrolase 13 family [H]

Homologues:

Organism=Homo sapiens, GI187423904, Length=583, Percent_Identity=28.1303602058319, Blast_Score=221, Evalue=2e-57,
Organism=Homo sapiens, GI65506891, Length=106, Percent_Identity=31.1320754716981, Blast_Score=69, Evalue=2e-11,
Organism=Homo sapiens, GI61744475, Length=106, Percent_Identity=31.1320754716981, Blast_Score=69, Evalue=2e-11,
Organism=Homo sapiens, GI61744479, Length=106, Percent_Identity=31.1320754716981, Blast_Score=69, Evalue=2e-11,
Organism=Homo sapiens, GI61744481, Length=106, Percent_Identity=31.1320754716981, Blast_Score=69, Evalue=2e-11,
Organism=Homo sapiens, GI61744477, Length=106, Percent_Identity=31.1320754716981, Blast_Score=69, Evalue=2e-11,
Organism=Homo sapiens, GI61744483, Length=106, Percent_Identity=31.1320754716981, Blast_Score=68, Evalue=2e-11,
Organism=Escherichia coli, GI1790687, Length=582, Percent_Identity=32.4742268041237, Blast_Score=245, Evalue=6e-66,
Organism=Escherichia coli, GI1786604, Length=130, Percent_Identity=33.0769230769231, Blast_Score=69, Evalue=8e-13,
Organism=Caenorhabditis elegans, GI32565753, Length=403, Percent_Identity=24.5657568238213, Blast_Score=101, Evalue=1e-21,
Organism=Caenorhabditis elegans, GI25147709, Length=216, Percent_Identity=26.3888888888889, Blast_Score=78, Evalue=1e-14,
Organism=Saccharomyces cerevisiae, GI6322245, Length=492, Percent_Identity=34.1463414634146, Blast_Score=226, Evalue=8e-60,
Organism=Saccharomyces cerevisiae, GI6321726, Length=621, Percent_Identity=28.8244766505636, Blast_Score=213, Evalue=6e-56,
Organism=Saccharomyces cerevisiae, GI6322241, Length=616, Percent_Identity=28.7337662337662, Blast_Score=212, Evalue=1e-55,
Organism=Saccharomyces cerevisiae, GI6322021, Length=616, Percent_Identity=28.7337662337662, Blast_Score=212, Evalue=1e-55,
Organism=Saccharomyces cerevisiae, GI6319776, Length=477, Percent_Identity=32.2851153039832, Blast_Score=211, Evalue=3e-55,
Organism=Saccharomyces cerevisiae, GI6324416, Length=617, Percent_Identity=28.6871961102107, Blast_Score=210, Evalue=5e-55,
Organism=Saccharomyces cerevisiae, GI6321731, Length=477, Percent_Identity=32.0754716981132, Blast_Score=209, Evalue=1e-54,
Organism=Drosophila melanogaster, GI24586597, Length=590, Percent_Identity=31.0169491525424, Blast_Score=257, Evalue=2e-68,
Organism=Drosophila melanogaster, GI24583747, Length=452, Percent_Identity=33.4070796460177, Blast_Score=245, Evalue=6e-65,
Organism=Drosophila melanogaster, GI24583749, Length=450, Percent_Identity=33.5555555555556, Blast_Score=245, Evalue=8e-65,
Organism=Drosophila melanogaster, GI24586599, Length=605, Percent_Identity=28.2644628099174, Blast_Score=244, Evalue=2e-64,
Organism=Drosophila melanogaster, GI24586593, Length=581, Percent_Identity=30.4647160068847, Blast_Score=242, Evalue=5e-64,
Organism=Drosophila melanogaster, GI24586589, Length=584, Percent_Identity=30.9931506849315, Blast_Score=238, Evalue=7e-63,
Organism=Drosophila melanogaster, GI24586591, Length=449, Percent_Identity=34.7438752783964, Blast_Score=237, Evalue=2e-62,
Organism=Drosophila melanogaster, GI24583745, Length=459, Percent_Identity=32.6797385620915, Blast_Score=236, Evalue=3e-62,
Organism=Drosophila melanogaster, GI221330053, Length=506, Percent_Identity=32.2134387351779, Blast_Score=236, Evalue=5e-62,
Organism=Drosophila melanogaster, GI45549022, Length=591, Percent_Identity=29.6108291032149, Blast_Score=228, Evalue=7e-60,
Organism=Drosophila melanogaster, GI24586587, Length=471, Percent_Identity=31.2101910828025, Blast_Score=221, Evalue=1e-57,
Organism=Drosophila melanogaster, GI281360393, Length=528, Percent_Identity=27.6515151515151, Blast_Score=171, Evalue=1e-42,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013780
- InterPro:   IPR006047
- InterPro:   IPR006589
- InterPro:   IPR017853
- InterPro:   IPR013781
- InterPro:   IPR012769 [H]

Pfam domain/function: PF00128 Alpha-amylase [H]

EC number: =3.2.1.93 [H]

Molecular weight: Translated: 67198; Mature: 67067

Theoretical pI: Translated: 4.43; Mature: 4.43

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTANNLNDDWWKQAVVYQIYPRSFKDVTGDGLGDIAGVTEKMDYLKSLGVDAIWLSPFYP
CCCCCCCHHHHHHEEEEEECCCCHHHCCCCCCHHHHHHHHHHHHHHHCCCCEEEECCCCC
SDLADGGYDVIDYRNVDPRLGTMDDFDAMAKAAHEADIKVIVDIVPNHTADKHVFFQEAL
CCCCCCCCEEEECCCCCCCCCCCCHHHHHHHHHHCCCEEEEEEECCCCCCCHHHHHHHHH
AAEPGSPARDRYIFRDGRGEHGELPPNDWQSFFGGPAWARVADGQWYLHLFDKAQPDVNW
HCCCCCCHHCCEEEECCCCCCCCCCCHHHHHHHCCCCEEEEECCEEEEEEECCCCCCCCC
KNPDIHEEFKKTLRFWSDHGTDGFRIDVAHGLAKDLESKPLEELGREYSVVGVLNHDFSH
CCCCHHHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHCCCHHHHCCCEEEEEEECCCCCC
PLFDRREVHDIYREWRKVFNEYNPPRFAVAEAWVVPEHQHLYASMDELGQSFNFDFAQAN
CCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCHHHHHHHHHHHHHHCCCCHHHCC
WYADEFREAIAAGLKAAAETGGSTTTWVMNNHDVPRSPSRYGLPQIKGAPYHQLPHDWLL
CCHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCHHHHH
RNGTTYPEDRELGTRRARAAALMELGLPGAAYIYQGEELGLFEVADIPWDHLEDPTAFHT
CCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCEEEECCCCHHHCCCCCHHHH
AQATMDKGRDGCRVPLPWTAADEPALADFSRPTPADDGTGENHVPLCAAGQFGTGASFGF
HHHHHHCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCC
SPATRAEGVTPAADPHLPQPLWFKDYAVDVEQADPDSMLALYRAALAIRQESLTATRDTT
CCCCCCCCCCCCCCCCCCCCCCCCHHEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCC
AEQVDMGDDVVAYTRAAVGGRTFTSITNFGDDPVVLPEGDVVLASGPLTPDGQLPTDTSA
HHHHCCCCCHHHHHHHHHCCCHHHHHHCCCCCCEEECCCCEEEECCCCCCCCCCCCCCCC
WIITQ
EEEEC
>Mature Secondary Structure 
TANNLNDDWWKQAVVYQIYPRSFKDVTGDGLGDIAGVTEKMDYLKSLGVDAIWLSPFYP
CCCCCCHHHHHHEEEEEECCCCHHHCCCCCCHHHHHHHHHHHHHHHCCCCEEEECCCCC
SDLADGGYDVIDYRNVDPRLGTMDDFDAMAKAAHEADIKVIVDIVPNHTADKHVFFQEAL
CCCCCCCCEEEECCCCCCCCCCCCHHHHHHHHHHCCCEEEEEEECCCCCCCHHHHHHHHH
AAEPGSPARDRYIFRDGRGEHGELPPNDWQSFFGGPAWARVADGQWYLHLFDKAQPDVNW
HCCCCCCHHCCEEEECCCCCCCCCCCHHHHHHHCCCCEEEEECCEEEEEEECCCCCCCCC
KNPDIHEEFKKTLRFWSDHGTDGFRIDVAHGLAKDLESKPLEELGREYSVVGVLNHDFSH
CCCCHHHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHCCCHHHHCCCEEEEEEECCCCCC
PLFDRREVHDIYREWRKVFNEYNPPRFAVAEAWVVPEHQHLYASMDELGQSFNFDFAQAN
CCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCHHHHHHHHHHHHHHCCCCHHHCC
WYADEFREAIAAGLKAAAETGGSTTTWVMNNHDVPRSPSRYGLPQIKGAPYHQLPHDWLL
CCHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCHHHHH
RNGTTYPEDRELGTRRARAAALMELGLPGAAYIYQGEELGLFEVADIPWDHLEDPTAFHT
CCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCEEEECCCCHHHCCCCCHHHH
AQATMDKGRDGCRVPLPWTAADEPALADFSRPTPADDGTGENHVPLCAAGQFGTGASFGF
HHHHHHCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCC
SPATRAEGVTPAADPHLPQPLWFKDYAVDVEQADPDSMLALYRAALAIRQESLTATRDTT
CCCCCCCCCCCCCCCCCCCCCCCCHHEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCC
AEQVDMGDDVVAYTRAAVGGRTFTSITNFGDDPVVLPEGDVVLASGPLTPDGQLPTDTSA
HHHHCCCCCHHHHHHHHHCCCHHHHHHCCCCCCEEECCCCEEEECCCCCCCCCCCCCCCC
WIITQ
EEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7651129; 8969503; 9384377; 7751281 [H]