| Definition | Bifidobacterium longum subsp. infantis ATCC 15697, complete genome. |
|---|---|
| Accession | NC_011593 |
| Length | 2,832,748 |
Click here to switch to the map view.
The map label for this gene is 213691056
Identifier: 213691056
GI number: 213691056
Start: 158907
End: 159272
Strand: Direct
Name: 213691056
Synonym: Blon_0135
Alternate gene names: NA
Gene position: 158907-159272 (Clockwise)
Preceding gene: 213691052
Following gene: 213691057
Centisome position: 5.61
GC content: 57.1
Gene sequence:
>366_bases ATGGTGAACGGCGTGCGTGACGGATCGCAGGACAAAGGCTGGAATCCAGCCATTCGCGGGCGTCTCGTGGATGGTCAGGG GCGATGTGTTCACTGGCATTCGCCATTGGATGTTGTTGCGAATCGTTTCGCCTGCTGTGACGAATATTACGCTTGCTACC GGTGCCATGATGAACTGGCTGGACATGATCGCATCGCGTGGCGAGACATGGATTCGCTCGCTGTGATGTGCGGTGTCTGC CGGCACCAGATGACGCCTCGCGAATACGGGCGGGCGATGGAGTCTGTTACTCCGTGCTGCCCTTGCTGCGGCGCACGGTT CAATCCTGGATGTGCCCTTCACCACGATATTTATTTCAGTGATTGA
Upstream 100 bases:
>100_bases GCTAACGATGATGAGCGGCGTGCGATTGGTTGGCCTGTACAAAAAATAGTGCATCTACTTGTGCAACACTGAATATTGGT CATAGCCGGAAAGGGGAGGC
Downstream 100 bases:
>100_bases TGGAGGCGGACGCTGGCGCAACTCTTGTTTTGGAATTGCTATGCGAGGGTGGTAAGTCTATTTCTCATGCTCTGGCGTGA AATAGCTCACGTTGTGGACT
Product: zinc finger, CHY domain protein
Products: NA
Alternate protein names: Zinc Finger CHY Domain Protein; CHY Zinc Finger Protein; Zinc Finger Protein; Zinc Finger CHY Domain-Containing Protein; Helper Of Tim Protein; CHY Zinc Finger Family; Zn-Finger Protein; Zinc Finger Domain Containing Protein; Zinc Finger Domain-Containing Protein
Number of amino acids: Translated: 121; Mature: 121
Protein sequence:
>121_residues MVNGVRDGSQDKGWNPAIRGRLVDGQGRCVHWHSPLDVVANRFACCDEYYACYRCHDELAGHDRIAWRDMDSLAVMCGVC RHQMTPREYGRAMESVTPCCPCCGARFNPGCALHHDIYFSD
Sequences:
>Translated_121_residues MVNGVRDGSQDKGWNPAIRGRLVDGQGRCVHWHSPLDVVANRFACCDEYYACYRCHDELAGHDRIAWRDMDSLAVMCGVC RHQMTPREYGRAMESVTPCCPCCGARFNPGCALHHDIYFSD >Mature_121_residues MVNGVRDGSQDKGWNPAIRGRLVDGQGRCVHWHSPLDVVANRFACCDEYYACYRCHDELAGHDRIAWRDMDSLAVMCGVC RHQMTPREYGRAMESVTPCCPCCGARFNPGCALHHDIYFSD
Specific function: Unknown
COG id: COG4357
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Saccharomyces cerevisiae, GI6322766, Length=108, Percent_Identity=49.0740740740741, Blast_Score=110, Evalue=8e-26,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13670; Mature: 13670
Theoretical pI: Translated: 6.83; Mature: 6.83
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
9.9 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 14.0 %Cys+Met (Translated Protein) 9.9 %Cys (Mature Protein) 4.1 %Met (Mature Protein) 14.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVNGVRDGSQDKGWNPAIRGRLVDGQGRCVHWHSPLDVVANRFACCDEYYACYRCHDELA CCCCCCCCCCCCCCCHHHCCEEECCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHC GHDRIAWRDMDSLAVMCGVCRHQMTPREYGRAMESVTPCCPCCGARFNPGCALHHDIYFS CCCCEECCCHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCCCEEEECCEEEC D C >Mature Secondary Structure MVNGVRDGSQDKGWNPAIRGRLVDGQGRCVHWHSPLDVVANRFACCDEYYACYRCHDELA CCCCCCCCCCCCCCCHHHCCEEECCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHC GHDRIAWRDMDSLAVMCGVCRHQMTPREYGRAMESVTPCCPCCGARFNPGCALHHDIYFS CCCCEECCCHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCCCEEEECCEEEC D C
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA