| Definition | Bifidobacterium longum subsp. infantis ATCC 15697, complete genome. |
|---|---|
| Accession | NC_011593 |
| Length | 2,832,748 |
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The map label for this gene is crcB1 [H]
Identifier: 213691047
GI number: 213691047
Start: 148161
End: 148556
Strand: Direct
Name: crcB1 [H]
Synonym: Blon_0126
Alternate gene names: 213691047
Gene position: 148161-148556 (Clockwise)
Preceding gene: 213691046
Following gene: 213691048
Centisome position: 5.23
GC content: 55.3
Gene sequence:
>396_bases ATGATGTGGATGATCTGTCTGTTCGGCGGTCTGGGAGCCATGGCCCGTTACGTGCTCGACGTGTCAATTCAACAAGGCTG GAACCGCGAGAATCGAAGAACGAACCGCAACTTCCCGCTATCCACGCTCGTCATCAACGGCGTCGCCTCGCTATGCGCGG GCATCGCCATGATGTCCTACTATTCGCAATCGGTGGATATGGACACGGTCATGATGTTCGTTGTCGGATTTCTCGGTGGT TTCTCAACATTCTCCACGGCGCTCAACGAAGTGGTTTCATTGATTCGCCAGCGTCGTTTTACGCTGGCTCTGGGCTATGG AATAGCAACCGTCGCGGTGCCTCTCATTTGTGTGGCCGCCGGTTTCGGCATTGCGCTGATTGCCAATCCGGCGTAA
Upstream 100 bases:
>100_bases TCCAGCAGCCGGCCAACCCGCTTCCACCCAGCTTCGAGCCCAAACCGATCACTGCGGAGATTTCGCTTGTCGCCGACCCG ACTACCGGGGAGGTGCGCTG
Downstream 100 bases:
>100_bases TTTTCACGTTACACGGACGGTCGCTGAGTAACGTGAAAGAAATCTGAGCGCAACCGCCATCAAGGCCGCCAGTCCGGATG CAACGCTGGTGATTGCATTC
Product: Camphor resistance CrcB protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 131; Mature: 131
Protein sequence:
>131_residues MMWMICLFGGLGAMARYVLDVSIQQGWNRENRRTNRNFPLSTLVINGVASLCAGIAMMSYYSQSVDMDTVMMFVVGFLGG FSTFSTALNEVVSLIRQRRFTLALGYGIATVAVPLICVAAGFGIALIANPA
Sequences:
>Translated_131_residues MMWMICLFGGLGAMARYVLDVSIQQGWNRENRRTNRNFPLSTLVINGVASLCAGIAMMSYYSQSVDMDTVMMFVVGFLGG FSTFSTALNEVVSLIRQRRFTLALGYGIATVAVPLICVAAGFGIALIANPA >Mature_131_residues MMWMICLFGGLGAMARYVLDVSIQQGWNRENRRTNRNFPLSTLVINGVASLCAGIAMMSYYSQSVDMDTVMMFVVGFLGG FSTFSTALNEVVSLIRQRRFTLALGYGIATVAVPLICVAAGFGIALIANPA
Specific function: Not Known. Overproduction Leads To Camphor Resistance And Chromosome Condensation; Deletion Increases Sensibility To Nucleoid Decondensation. Probably Interacts With The Heat-Shock Protein Cspe, Possibly Providing A Way To Anchor The Chromosome To The Mem
COG id: COG0239
COG function: function code D; Integral membrane protein possibly involved in chromosome condensation
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the CrcB family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003691 [H]
Pfam domain/function: PF02537 CRCB [H]
EC number: NA
Molecular weight: Translated: 14173; Mature: 14173
Theoretical pI: Translated: 8.88; Mature: 8.88
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 6.9 %Met (Translated Protein) 9.2 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 6.9 %Met (Mature Protein) 9.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMWMICLFGGLGAMARYVLDVSIQQGWNRENRRTNRNFPLSTLVINGVASLCAGIAMMSY CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH YSQSVDMDTVMMFVVGFLGGFSTFSTALNEVVSLIRQRRFTLALGYGIATVAVPLICVAA HHHCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GFGIALIANPA CCCEEEEECCC >Mature Secondary Structure MMWMICLFGGLGAMARYVLDVSIQQGWNRENRRTNRNFPLSTLVINGVASLCAGIAMMSY CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH YSQSVDMDTVMMFVVGFLGGFSTFSTALNEVVSLIRQRRFTLALGYGIATVAVPLICVAA HHHCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GFGIALIANPA CCCEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 12381787 [H]