Definition Bifidobacterium longum subsp. infantis ATCC 15697, complete genome.
Accession NC_011593
Length 2,832,748

Click here to switch to the map view.

The map label for this gene is 213690938

Identifier: 213690938

GI number: 213690938

Start: 13058

End: 13282

Strand: Reverse

Name: 213690938

Synonym: Blon_0010

Alternate gene names: NA

Gene position: 13282-13058 (Counterclockwise)

Preceding gene: 213690939

Following gene: NA

Centisome position: 0.47

GC content: 54.22

Gene sequence:

>225_bases
ATGATCATCAATCCAAGCTATCTGCTTTCAGAGGGGTACATTCGGCCTTCTGCAGATAACAGCTCAGCTTCCACCTCCAT
AACCCCGGAACTCACCACCGTCGATCAGCACATGGATCAGTGCGGCTGGACCATGGCCGACGTGGTCATCAAAGCCATCA
ACGGAGTCTCTTCACCGCGCGTGATGCACCTGAACACCGATTTGGTGGTGCGTGAGTTGGCGTAA

Upstream 100 bases:

>100_bases
GTGAGGAGGCAAGGGCATTGCTATATGTACAACGAACGCAACAAGTGCTATCCCCAAATACGTAAGCATTACGCACCACT
ATACGAGTGAATTCTTGGAT

Downstream 100 bases:

>100_bases
TTGCCACGTGGCTGTCGGCAGGACTCTGGATATCCCGCGTCACAATCACCCAGTAATGCATCACGCAGTGTATAACTCTT
CCGCAGAAACGAATACCATT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 74; Mature: 74

Protein sequence:

>74_residues
MIINPSYLLSEGYIRPSADNSSASTSITPELTTVDQHMDQCGWTMADVVIKAINGVSSPRVMHLNTDLVVRELA

Sequences:

>Translated_74_residues
MIINPSYLLSEGYIRPSADNSSASTSITPELTTVDQHMDQCGWTMADVVIKAINGVSSPRVMHLNTDLVVRELA
>Mature_74_residues
MIINPSYLLSEGYIRPSADNSSASTSITPELTTVDQHMDQCGWTMADVVIKAINGVSSPRVMHLNTDLVVRELA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 8062; Mature: 8062

Theoretical pI: Translated: 4.49; Mature: 4.49

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
5.4 %Met     (Translated Protein)
6.8 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
5.4 %Met     (Mature Protein)
6.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIINPSYLLSEGYIRPSADNSSASTSITPELTTVDQHMDQCGWTMADVVIKAINGVSSPR
CEECCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHCCCCCCE
VMHLNTDLVVRELA
EEEECCCEEEEECC
>Mature Secondary Structure
MIINPSYLLSEGYIRPSADNSSASTSITPELTTVDQHMDQCGWTMADVVIKAINGVSSPR
CEECCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHCCCCCCE
VMHLNTDLVVRELA
EEEECCCEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA