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The map label for this gene is recJ [H]

Identifier: 213159057

GI number: 213159057

Start: 3882739

End: 3884439

Strand: Reverse

Name: recJ [H]

Synonym: AB57_3767

Alternate gene names: 213159057

Gene position: 3884439-3882739 (Counterclockwise)

Preceding gene: 213159058

Following gene: 213159055

Centisome position: 95.9

GC content: 42.68

Gene sequence:

>1701_bases
ATGACAAAAATACAAATTAAACAAAGACCTTTATTGACACGCCCTGAACAGTTTCAGGGCGTGCCTCCGTTTATTGCCGA
AATTTTGGCAAGACGGGGCGTACAATCCGAGCAAGAACTAGAGTTAAAGCTTAAGAATTTATTGGCTCCTGAACTCAAAG
GGTTGGACGCTGCTGTAGCATTAATGGATCAAGCCATCGATGAGCAGAAAAAAATAGTTATTGTGGGGGACTATGACGCT
GATGGCGCAACCAGCACTGCTTTAATGATGCTCGTGCTTCGCGATATGGGAGCACAAGTCGACTATTTGGTACCGGATCG
TTTTAAATATGGCTATGGACTTACTCCTGCCATTGCTGAGCTTGCTCATCACACCTATCAACCCGATCTATTAATTACGG
TAGATAATGGTATTTCTAGTCATGCTGGTGTTGATGCAGCACATGCCCTAGGCATGCAAGTGATTATTACTGATCATCAC
TTAACGACTAAAGAAACCCCACTTGCTGAGGCGGTGGTAAACCCAAACCAATTAGGCTGTGAGTTTCCAAGTAAAGCATT
GGCAGGTGTTGGTGTTGCTTTTTATGTACTTGCCAATTTGGCGAGCCTACGCAATAGACAAGGTAAAAGCACAAGTAAAG
TTACCCAATATTTAGATTTGGTCGCTTTAGGAACTTATGCTGATGTTGCTGTCCTAGATTATAACAACCGTATTTTGGTC
GATGCAGGTGTAAAACGCATTCAGCAACATCAGTGTCGAGTGGGAATCTTAGCCTTACTCGATATCGCTGGTCGAGAAGC
TACTTCAATACGTGCCCAAGATTTAGGTTTTGTGCTCGGACCGCGCATTAATGCTGCTGGACGTATGGAGAGTATGCGTA
TTGGGATCGAGTGTTTATTAGCTGACACGATGGAAACTGCATACCCCATTGCTCAGCAATTAAATCAGTTAAATATCGAT
CGCCGTCAAATTGAAGGGGAGATGAAGCAACAAGCTTTATCTGCTTTAGACAGTTTACAGCTCTCACAACAAGATATTCC
CGCGGCGCTTGTTCTGTTTGAAGAAAACTGGCACCAAGGTGTAATCGGGATTGTCGCGGGACGTTTAAAAGAACAGTTTC
ATCGTCCAACGATTGTGTTTGCCCCAGATGAAGATGGTATTCATATTAAAGGCTCAGCACGTTCCATTGATGGGGTGCAT
ATTCGAGATACCATTGAACAAGTTGCCGAACAACATCCTGAATTGGTCAGCCATTTTGGTGGACATGCGGCAGCGGCAGG
CTTAACGATTCGTAAAGAAAACTTTGAAGCTTTTAAAACCGTATTTAATGATTGTGTAGCTGCTATGGATGAATCAATCT
TTCAAGCGACATTATGGACCGATGGTGAGCTACCTGTCTCTGCTTTGCAATTAGATACCTTAAACTGGATTGAGCAATTA
GGTCCGTGGGGACAAAAATTTCCACTGCCTCAATTTGAAGGACATTTTAAAGTTATCGATTTTCGTTGGCTCAAAGAGAC
ACATTTAAAGCTTAGATTAGCGATAGACCAATATAGTTTCGATGCTATTGCTTTTAATGCGGCAGGTCGCTTCGAGTTTG
ATCCGATGCGTGACCATGTGCATTTGGTTTATGAAATAGACCGTAATGTCTTTAATGGGAATGTGAGCTTACAGCTACGC
ATTGTGCATTTAAATCAATAA

Upstream 100 bases:

>100_bases
TTATTATGAGTTCTGGCAAGGGCGACCAAATCGTTTACATGACCGCTTGAGTTATGAAAAAATCGACGGTCAATGGACGT
TGCACCGACTGATGCCTTAA

Downstream 100 bases:

>100_bases
AAAAATCCGCTCAATTGAGCGGATTTTTTTTAATCTAGCTTAGATTAGAAGCGGTATGCTGCACGAACACCATAAGTGTT
GTCGTTATCACCGAATCCAA

Product: single-stranded-DNA-specific exonuclease RecJ

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 566; Mature: 565

Protein sequence:

>566_residues
MTKIQIKQRPLLTRPEQFQGVPPFIAEILARRGVQSEQELELKLKNLLAPELKGLDAAVALMDQAIDEQKKIVIVGDYDA
DGATSTALMMLVLRDMGAQVDYLVPDRFKYGYGLTPAIAELAHHTYQPDLLITVDNGISSHAGVDAAHALGMQVIITDHH
LTTKETPLAEAVVNPNQLGCEFPSKALAGVGVAFYVLANLASLRNRQGKSTSKVTQYLDLVALGTYADVAVLDYNNRILV
DAGVKRIQQHQCRVGILALLDIAGREATSIRAQDLGFVLGPRINAAGRMESMRIGIECLLADTMETAYPIAQQLNQLNID
RRQIEGEMKQQALSALDSLQLSQQDIPAALVLFEENWHQGVIGIVAGRLKEQFHRPTIVFAPDEDGIHIKGSARSIDGVH
IRDTIEQVAEQHPELVSHFGGHAAAAGLTIRKENFEAFKTVFNDCVAAMDESIFQATLWTDGELPVSALQLDTLNWIEQL
GPWGQKFPLPQFEGHFKVIDFRWLKETHLKLRLAIDQYSFDAIAFNAAGRFEFDPMRDHVHLVYEIDRNVFNGNVSLQLR
IVHLNQ

Sequences:

>Translated_566_residues
MTKIQIKQRPLLTRPEQFQGVPPFIAEILARRGVQSEQELELKLKNLLAPELKGLDAAVALMDQAIDEQKKIVIVGDYDA
DGATSTALMMLVLRDMGAQVDYLVPDRFKYGYGLTPAIAELAHHTYQPDLLITVDNGISSHAGVDAAHALGMQVIITDHH
LTTKETPLAEAVVNPNQLGCEFPSKALAGVGVAFYVLANLASLRNRQGKSTSKVTQYLDLVALGTYADVAVLDYNNRILV
DAGVKRIQQHQCRVGILALLDIAGREATSIRAQDLGFVLGPRINAAGRMESMRIGIECLLADTMETAYPIAQQLNQLNID
RRQIEGEMKQQALSALDSLQLSQQDIPAALVLFEENWHQGVIGIVAGRLKEQFHRPTIVFAPDEDGIHIKGSARSIDGVH
IRDTIEQVAEQHPELVSHFGGHAAAAGLTIRKENFEAFKTVFNDCVAAMDESIFQATLWTDGELPVSALQLDTLNWIEQL
GPWGQKFPLPQFEGHFKVIDFRWLKETHLKLRLAIDQYSFDAIAFNAAGRFEFDPMRDHVHLVYEIDRNVFNGNVSLQLR
IVHLNQ
>Mature_565_residues
TKIQIKQRPLLTRPEQFQGVPPFIAEILARRGVQSEQELELKLKNLLAPELKGLDAAVALMDQAIDEQKKIVIVGDYDAD
GATSTALMMLVLRDMGAQVDYLVPDRFKYGYGLTPAIAELAHHTYQPDLLITVDNGISSHAGVDAAHALGMQVIITDHHL
TTKETPLAEAVVNPNQLGCEFPSKALAGVGVAFYVLANLASLRNRQGKSTSKVTQYLDLVALGTYADVAVLDYNNRILVD
AGVKRIQQHQCRVGILALLDIAGREATSIRAQDLGFVLGPRINAAGRMESMRIGIECLLADTMETAYPIAQQLNQLNIDR
RQIEGEMKQQALSALDSLQLSQQDIPAALVLFEENWHQGVIGIVAGRLKEQFHRPTIVFAPDEDGIHIKGSARSIDGVHI
RDTIEQVAEQHPELVSHFGGHAAAAGLTIRKENFEAFKTVFNDCVAAMDESIFQATLWTDGELPVSALQLDTLNWIEQLG
PWGQKFPLPQFEGHFKVIDFRWLKETHLKLRLAIDQYSFDAIAFNAAGRFEFDPMRDHVHLVYEIDRNVFNGNVSLQLRI
VHLNQ

Specific function: Single-stranded-DNA-specific exonuclease. Required for many types of recombinational events, although the stringency of the requirement for recJ appears to vary with the type of recombinational event monitored and the other recombination gene products whi

COG id: COG0608

COG function: function code L; Single-stranded DNA-specific exonuclease

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the recJ family [H]

Homologues:

Organism=Escherichia coli, GI1789259, Length=570, Percent_Identity=44.2105263157895, Blast_Score=476, Evalue=1e-135,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003156
- InterPro:   IPR001667
- InterPro:   IPR004610 [H]

Pfam domain/function: PF01368 DHH; PF02272 DHHA1 [H]

EC number: 3.1.-.- [C]

Molecular weight: Translated: 62776; Mature: 62645

Theoretical pI: Translated: 5.55; Mature: 5.55

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTKIQIKQRPLLTRPEQFQGVPPFIAEILARRGVQSEQELELKLKNLLAPELKGLDAAVA
CCEEEECCCCCCCCCHHHCCCCHHHHHHHHHCCCCCHHHHHHHHHHHCCHHHCCCHHHHH
LMDQAIDEQKKIVIVGDYDADGATSTALMMLVLRDMGAQVDYLVPDRFKYGYGLTPAIAE
HHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCHHHHH
LAHHTYQPDLLITVDNGISSHAGVDAAHALGMQVIITDHHLTTKETPLAEAVVNPNQLGC
HHHHCCCCCEEEEECCCCCCCCCCCHHHHCCEEEEEECCCCCCCCCCHHHHHCCCCCCCC
EFPSKALAGVGVAFYVLANLASLRNRQGKSTSKVTQYLDLVALGTYADVAVLDYNNRILV
CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCEEEEECCCEEEE
DAGVKRIQQHQCRVGILALLDIAGREATSIRAQDLGFVLGPRINAAGRMESMRIGIECLL
HHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEHHHCCEEECCCCCCCCCHHHHHHHHHHEE
ADTMETAYPIAQQLNQLNIDRRQIEGEMKQQALSALDSLQLSQQDIPAALVLFEENWHQG
HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCC
VIGIVAGRLKEQFHRPTIVFAPDEDGIHIKGSARSIDGVHIRDTIEQVAEQHPELVSHFG
HHHHHHHHHHHHHCCCEEEECCCCCCEEEECCCCCCCCEEHHHHHHHHHHHCHHHHHHCC
GHAAAAGLTIRKENFEAFKTVFNDCVAAMDESIFQATLWTDGELPVSALQLDTLNWIEQL
CCHHHCCEEEECCHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCHHHEEHHHHHHHHHH
GPWGQKFPLPQFEGHFKVIDFRWLKETHLKLRLAIDQYSFDAIAFNAAGRFEFDPMRDHV
CCCCCCCCCCCCCCCEEEEEEEEHHCCCEEEEEEEECCCCCEEEEECCCCCCCCCCCCCE
HLVYEIDRNVFNGNVSLQLRIVHLNQ
EEEEEECCCEECCCEEEEEEEEEECC
>Mature Secondary Structure 
TKIQIKQRPLLTRPEQFQGVPPFIAEILARRGVQSEQELELKLKNLLAPELKGLDAAVA
CEEEECCCCCCCCCHHHCCCCHHHHHHHHHCCCCCHHHHHHHHHHHCCHHHCCCHHHHH
LMDQAIDEQKKIVIVGDYDADGATSTALMMLVLRDMGAQVDYLVPDRFKYGYGLTPAIAE
HHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCHHHHH
LAHHTYQPDLLITVDNGISSHAGVDAAHALGMQVIITDHHLTTKETPLAEAVVNPNQLGC
HHHHCCCCCEEEEECCCCCCCCCCCHHHHCCEEEEEECCCCCCCCCCHHHHHCCCCCCCC
EFPSKALAGVGVAFYVLANLASLRNRQGKSTSKVTQYLDLVALGTYADVAVLDYNNRILV
CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCEEEEECCCEEEE
DAGVKRIQQHQCRVGILALLDIAGREATSIRAQDLGFVLGPRINAAGRMESMRIGIECLL
HHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEHHHCCEEECCCCCCCCCHHHHHHHHHHEE
ADTMETAYPIAQQLNQLNIDRRQIEGEMKQQALSALDSLQLSQQDIPAALVLFEENWHQG
HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCC
VIGIVAGRLKEQFHRPTIVFAPDEDGIHIKGSARSIDGVHIRDTIEQVAEQHPELVSHFG
HHHHHHHHHHHHHCCCEEEECCCCCCEEEECCCCCCCCEEHHHHHHHHHHHCHHHHHHCC
GHAAAAGLTIRKENFEAFKTVFNDCVAAMDESIFQATLWTDGELPVSALQLDTLNWIEQL
CCHHHCCEEEECCHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCHHHEEHHHHHHHHHH
GPWGQKFPLPQFEGHFKVIDFRWLKETHLKLRLAIDQYSFDAIAFNAAGRFEFDPMRDHV
CCCCCCCCCCCCCCCEEEEEEEEHHCCCEEEEEEEECCCCCEEEEECCCCCCCCCCCCCE
HLVYEIDRNVFNGNVSLQLRIVHLNQ
EEEEEECCCEECCCEEEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Hydrolase; Acting on ester bonds [C]

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8168497 [H]