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The map label for this gene is ynjA [C]

Identifier: 213159004

GI number: 213159004

Start: 3822124

End: 3822540

Strand: Direct

Name: ynjA [C]

Synonym: AB57_3711

Alternate gene names: 213159004

Gene position: 3822124-3822540 (Clockwise)

Preceding gene: 213159002

Following gene: 213159006

Centisome position: 94.36

GC content: 35.49

Gene sequence:

>417_bases
GTGGAATATAAAGAAGTTTCAAAGAAAACCATCGGGCATTTATATTCAGCTCATTCATCTATTAGATCTTCAGATTTAGA
CCCAAAACTGATTGCTTTAGCCGAGTTGTATGTATCTCAAATTAATGGTTGCGCGTATTGTTGTGCTTTTCATTCCAAGG
AATTAAGAGACTTTGGCATAGCTCAAGAAGTTATCGACCAAATACCGGGTTATAAACATTCAAAAGCCTTTTCTGAAAAA
CAAAAAGTCGTTTTGGAGTTTGCATCCGCAATTACTTCTTTAAATGACCCGAAACAAATTGAAGCGACCAGAGAAAGTTT
GGCTCAGCATTTTAGTGAAAAAGAGATTGTAGATTTAACGGCGAGTATTTCTTTAATGGGGGCATTAAACAGATTAAGAA
TTACCTTAGGCGATTAA

Upstream 100 bases:

>100_bases
AAGTATAATAAATATACCTACATAACAAAAAAATGCCTAATTTACAACTTATACCTATTTATAAATAATGATTTTCTCTG
AACAATCACGGATATTTACT

Downstream 100 bases:

>100_bases
GCCCCATACAAATTTTTAAGTTTTAAAAAGGCCTAAATCTAGGCCTTTCCCCTATCAAACCCGCTCTAAAAAATACTCAA
GCAAAGCATCCCTTTCCCTT

Product: hypothetical protein

Products: NA

Alternate protein names: Alkylhydroperoxidase AhpD Core; Alkylhydroperoxidase Like Protein AhpD Family; Alkylhydroperoxidase Like Protein; Cytoplasmic Protein; Carboxymuconolactone Decarboxylase Family Protein; Carboxymuconolactone Decarboxylase; Alkylhydroperoxidase AhpD Family Core Domain-Containing; 4-Carboxymuconolactone Decarboxylase Domain Protein; Alkylhydroperoxidase AhpD; Alkylhydroperoxidase AhpD Family Core Domain Protein; Transposase; Alkylhydroperoxidase-Like Protein; Alkylhydroperoxidase AhpD Core Protein; Alkylhydroperoxidase AhpD Core Domain-Containing Protein; Peroxidase-Related Prptein; Carboxymuconolactone Family Protein; Conserved Protein; Peroxidase; Alkylhydroperoxidase Like Protein Ahpd Family; Alkylhydroperoxidase Like Protein AhpD Family Protein

Number of amino acids: Translated: 138; Mature: 138

Protein sequence:

>138_residues
MEYKEVSKKTIGHLYSAHSSIRSSDLDPKLIALAELYVSQINGCAYCCAFHSKELRDFGIAQEVIDQIPGYKHSKAFSEK
QKVVLEFASAITSLNDPKQIEATRESLAQHFSEKEIVDLTASISLMGALNRLRITLGD

Sequences:

>Translated_138_residues
MEYKEVSKKTIGHLYSAHSSIRSSDLDPKLIALAELYVSQINGCAYCCAFHSKELRDFGIAQEVIDQIPGYKHSKAFSEK
QKVVLEFASAITSLNDPKQIEATRESLAQHFSEKEIVDLTASISLMGALNRLRITLGD
>Mature_138_residues
MEYKEVSKKTIGHLYSAHSSIRSSDLDPKLIALAELYVSQINGCAYCCAFHSKELRDFGIAQEVIDQIPGYKHSKAFSEK
QKVVLEFASAITSLNDPKQIEATRESLAQHFSEKEIVDLTASISLMGALNRLRITLGD

Specific function: Unknown

COG id: COG2128

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15349; Mature: 15349

Theoretical pI: Translated: 6.67; Mature: 6.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEYKEVSKKTIGHLYSAHSSIRSSDLDPKLIALAELYVSQINGCAYCCAFHSKELRDFGI
CCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCH
AQEVIDQIPGYKHSKAFSEKQKVVLEFASAITSLNDPKQIEATRESLAQHFSEKEIVDLT
HHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCHHHHHHH
ASISLMGALNRLRITLGD
HHHHHHHHHHHHEEEECC
>Mature Secondary Structure
MEYKEVSKKTIGHLYSAHSSIRSSDLDPKLIALAELYVSQINGCAYCCAFHSKELRDFGI
CCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCH
AQEVIDQIPGYKHSKAFSEKQKVVLEFASAITSLNDPKQIEATRESLAQHFSEKEIVDLT
HHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCHHHHHHH
ASISLMGALNRLRITLGD
HHHHHHHHHHHHEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA