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The map label for this gene is ytfH [C]

Identifier: 213159000

GI number: 213159000

Start: 3820325

End: 3820660

Strand: Direct

Name: ytfH [C]

Synonym: AB57_3707

Alternate gene names: 213159000

Gene position: 3820325-3820660 (Clockwise)

Preceding gene: 213158998

Following gene: 213159001

Centisome position: 94.32

GC content: 37.5

Gene sequence:

>336_bases
ATGACTGACTGCCTTCCATCAAATACGCCATTAGAAGAAACAGGTTTTGGCTACACTCTTTCTTTAATTAATGGCAAATA
TAAGATGATCATCATGTATTGGCTGTATGGAAAAACCGTTATGCGTTTTAATGAGTTGCAGCGCTGTATTGGCAATATTT
CATTTAGAACGCTGAGCAATACACTTAAAGAGTTAGAAAGAGACGAACTGATTATTCGTAAGGAATATCCTCAAATTCCA
CCAAAGGTTGAGTATCGTCTTTCTGAAAGAGGACAGTCTTTAATTCCTTTGCTAGATATGATGTGCCAATGGGGCGAGCG
GAATATGAATTCTTAG

Upstream 100 bases:

>100_bases
CGAAAAATAGATAAATCGATTATAGAAGTGTGCTTTCCTAAATATAAGTACGGTAATTTTTGTTATATACTATACTAAAA
GATAGTGTAGATTTAAAAAA

Downstream 100 bases:

>100_bases
TTTTATAGACTGAAAGTGATACTCAATATGAGACATGAATTAAGAGAAATTTTTATTAAGGGATGCGACGAGAAAATTCA
AAAGAAGGGAGACAATGTCG

Product: transcriptional regulator, MarR family

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 111; Mature: 110

Protein sequence:

>111_residues
MTDCLPSNTPLEETGFGYTLSLINGKYKMIIMYWLYGKTVMRFNELQRCIGNISFRTLSNTLKELERDELIIRKEYPQIP
PKVEYRLSERGQSLIPLLDMMCQWGERNMNS

Sequences:

>Translated_111_residues
MTDCLPSNTPLEETGFGYTLSLINGKYKMIIMYWLYGKTVMRFNELQRCIGNISFRTLSNTLKELERDELIIRKEYPQIP
PKVEYRLSERGQSLIPLLDMMCQWGERNMNS
>Mature_110_residues
TDCLPSNTPLEETGFGYTLSLINGKYKMIIMYWLYGKTVMRFNELQRCIGNISFRTLSNTLKELERDELIIRKEYPQIPP
KVEYRLSERGQSLIPLLDMMCQWGERNMNS

Specific function: Unknown

COG id: COG1733

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH hxlR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002577
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01638 DUF24 [H]

EC number: NA

Molecular weight: Translated: 13106; Mature: 12974

Theoretical pI: Translated: 8.01; Mature: 8.01

Prosite motif: PS51118 HTH_HXLR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.7 %Cys     (Translated Protein)
6.3 %Met     (Translated Protein)
9.0 %Cys+Met (Translated Protein)
2.7 %Cys     (Mature Protein)
5.5 %Met     (Mature Protein)
8.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTDCLPSNTPLEETGFGYTLSLINGKYKMIIMYWLYGKTVMRFNELQRCIGNISFRTLSN
CCCCCCCCCCCCCCCCCEEEEEECCCCCEEEHHHHHHHHHHHHHHHHHHHHCCHHHHHHH
TLKELERDELIIRKEYPQIPPKVEYRLSERGQSLIPLLDMMCQWGERNMNS
HHHHHHHHHEEEECCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
TDCLPSNTPLEETGFGYTLSLINGKYKMIIMYWLYGKTVMRFNELQRCIGNISFRTLSN
CCCCCCCCCCCCCCCCEEEEEECCCCCEEEHHHHHHHHHHHHHHHHHHHHCCHHHHHHH
TLKELERDELIIRKEYPQIPPKVEYRLSERGQSLIPLLDMMCQWGERNMNS
HHHHHHHHHEEEECCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10086842; 11058132 [H]