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The map label for this gene is ppdD [C]

Identifier: 213158919

GI number: 213158919

Start: 3724492

End: 3724974

Strand: Reverse

Name: ppdD [C]

Synonym: AB57_3620

Alternate gene names: 213158919

Gene position: 3724974-3724492 (Counterclockwise)

Preceding gene: 213158920

Following gene: 213158918

Centisome position: 91.96

GC content: 36.65

Gene sequence:

>483_bases
ATGAATAAGTACTACATTTTACGGTTCAATCAGGGTTTTACCTTGATTGAGCTTATGGTCGTGATTGTTATCGTTGCTAT
TTTTGCTTCAATTGCTATCCCTTCATATCAAAGTTATAGCCGTAGAGCTACTGCATCTGCGGCTAAAAGTGAAATTTTGA
AATTAGCTGAACAATTAGAACAGCATAAATCAAGAAATTTTACTTATAGGGGTTTTACCACAACCTCTATAACCCTACCT
CGCGGGGGATATACGATTCAAATTACTGATGATACGACCACAGGAAATTTATTGACGAATGCTGCTGCAAATGGGCAAAC
ATGGGTCATTAAAGCAACCACAACAGATTCGAGAAATTTTAATTTTATTGCTAAAAATTCAGGTATACGTTGTCAAAGTT
TAACAGTTACAGCCGTTGATAATGATTGTGGTGGTACGACTACTTGTAATACATGTGAAACGAACAGTGAGGTTTGGCAG
TGA

Upstream 100 bases:

>100_bases
TTAAAGCTGTCTGGTAATGAGCAAGGGACTGGACAGTGGCAATGTACGAGTCATTTAGTTCCTACGCGTTGGTATGAGCG
TTATCGTTAAGGGATGACTT

Downstream 100 bases:

>100_bases
AGAATGGTTTTTCTTTAATTGAAATTATGGTCGTGGTAGCAATAGTTGCAATTTTAGCGGCTATAGCCACCCCTTCATAT
TTACAATATTTGCGTAAAGG

Product: pilin like competence factor

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 160; Mature: 160

Protein sequence:

>160_residues
MNKYYILRFNQGFTLIELMVVIVIVAIFASIAIPSYQSYSRRATASAAKSEILKLAEQLEQHKSRNFTYRGFTTTSITLP
RGGYTIQITDDTTTGNLLTNAAANGQTWVIKATTTDSRNFNFIAKNSGIRCQSLTVTAVDNDCGGTTTCNTCETNSEVWQ

Sequences:

>Translated_160_residues
MNKYYILRFNQGFTLIELMVVIVIVAIFASIAIPSYQSYSRRATASAAKSEILKLAEQLEQHKSRNFTYRGFTTTSITLP
RGGYTIQITDDTTTGNLLTNAAANGQTWVIKATTTDSRNFNFIAKNSGIRCQSLTVTAVDNDCGGTTTCNTCETNSEVWQ
>Mature_160_residues
MNKYYILRFNQGFTLIELMVVIVIVAIFASIAIPSYQSYSRRATASAAKSEILKLAEQLEQHKSRNFTYRGFTTTSITLP
RGGYTIQITDDTTTGNLLTNAAANGQTWVIKATTTDSRNFNFIAKNSGIRCQSLTVTAVDNDCGGTTTCNTCETNSEVWQ

Specific function: Not Yet Known. [C]

COG id: COG4968

COG function: function code NU; Tfp pilus assembly protein PilE

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17658; Mature: 17658

Theoretical pI: Translated: 8.62; Mature: 8.62

Prosite motif: PS00409 PROKAR_NTER_METHYL

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKYYILRFNQGFTLIELMVVIVIVAIFASIAIPSYQSYSRRATASAAKSEILKLAEQLE
CCCEEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
QHKSRNFTYRGFTTTSITLPRGGYTIQITDDTTTGNLLTNAAANGQTWVIKATTTDSRNF
HHHHCCCEECCEEEEEEEECCCCEEEEEECCCCCCCEEEECCCCCCEEEEEEECCCCCCE
NFIAKNSGIRCQSLTVTAVDNDCGGTTTCNTCETNSEVWQ
EEEECCCCCEEEEEEEEEEECCCCCCCCCCCCCCCHHHCC
>Mature Secondary Structure
MNKYYILRFNQGFTLIELMVVIVIVAIFASIAIPSYQSYSRRATASAAKSEILKLAEQLE
CCCEEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
QHKSRNFTYRGFTTTSITLPRGGYTIQITDDTTTGNLLTNAAANGQTWVIKATTTDSRNF
HHHHCCCEECCEEEEEEEECCCCEEEEEECCCCCCCEEEECCCCCCEEEEEEECCCCCCE
NFIAKNSGIRCQSLTVTAVDNDCGGTTTCNTCETNSEVWQ
EEEECCCCCEEEEEEEEEEECCCCCCCCCCCCCCCHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA