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The map label for this gene is ppdD [C]

Identifier: 213158918

GI number: 213158918

Start: 3724070

End: 3724495

Strand: Reverse

Name: ppdD [C]

Synonym: AB57_3619

Alternate gene names: 213158918

Gene position: 3724495-3724070 (Counterclockwise)

Preceding gene: 213158919

Following gene: 213158917

Centisome position: 91.95

GC content: 37.32

Gene sequence:

>426_bases
GTGAAGAATGGTTTTTCTTTAATTGAAATTATGGTCGTGGTAGCAATAGTTGCAATTTTAGCGGCTATAGCCACCCCTTC
ATATTTACAATATTTGCGTAAAGGACATCGTACTGCTGTTCAATCCGAAATGATGAATATTGCGCAGACTTTAGAGTCTC
AAAAAATAGTAAATAACCGTTATCCTTCGGATGCAACTATACAATCAATTTATGGTTCTAATGTGAGTCCTATACAAGGT
CAGGCTCTATATAAGTTAGCTTTTGCAACTCTAAATGATTCAACTTGGGTACTTACTGCAATACCTATTTCTACTAGCTC
ACAAGCAGGTGATGGAATTATTTGTTTAAATGACCAAGGGCAAAAATTTTGGGCAAAGGGTGCCACAGTTTGTGCACTAT
CTGCTTCATCGAGTTGGACCGAGTAA

Upstream 100 bases:

>100_bases
CAGGTATACGTTGTCAAAGTTTAACAGTTACAGCCGTTGATAATGATTGTGGTGGTACGACTACTTGTAATACATGTGAA
ACGAACAGTGAGGTTTGGCA

Downstream 100 bases:

>100_bases
TTTAAATTCAAAACTGCGGATAACTCAAAATTTAATCTTTCTTTCAGGGTGAAAATCACGTAGAATGTCGCCCTCTATGA
AAGGGGTTTGAAGTGTTGCC

Product: pilin like competence factor

Products: NA

Alternate protein names: Tfp Pilus Assembly Protein PilE; Competence Protein ComF

Number of amino acids: Translated: 141; Mature: 141

Protein sequence:

>141_residues
MKNGFSLIEIMVVVAIVAILAAIATPSYLQYLRKGHRTAVQSEMMNIAQTLESQKIVNNRYPSDATIQSIYGSNVSPIQG
QALYKLAFATLNDSTWVLTAIPISTSSQAGDGIICLNDQGQKFWAKGATVCALSASSSWTE

Sequences:

>Translated_141_residues
MKNGFSLIEIMVVVAIVAILAAIATPSYLQYLRKGHRTAVQSEMMNIAQTLESQKIVNNRYPSDATIQSIYGSNVSPIQG
QALYKLAFATLNDSTWVLTAIPISTSSQAGDGIICLNDQGQKFWAKGATVCALSASSSWTE
>Mature_141_residues
MKNGFSLIEIMVVVAIVAILAAIATPSYLQYLRKGHRTAVQSEMMNIAQTLESQKIVNNRYPSDATIQSIYGSNVSPIQG
QALYKLAFATLNDSTWVLTAIPISTSSQAGDGIICLNDQGQKFWAKGATVCALSASSSWTE

Specific function: Not Yet Known. [C]

COG id: COG4968

COG function: function code NU; Tfp pilus assembly protein PilE

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15176; Mature: 15176

Theoretical pI: Translated: 8.19; Mature: 8.19

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNGFSLIEIMVVVAIVAILAAIATPSYLQYLRKGHRTAVQSEMMNIAQTLESQKIVNNR
CCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
YPSDATIQSIYGSNVSPIQGQALYKLAFATLNDSTWVLTAIPISTSSQAGDGIICLNDQG
CCCCHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCEEEECCCC
QKFWAKGATVCALSASSSWTE
CEEHHCCCEEEEEECCCCCCC
>Mature Secondary Structure
MKNGFSLIEIMVVVAIVAILAAIATPSYLQYLRKGHRTAVQSEMMNIAQTLESQKIVNNR
CCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
YPSDATIQSIYGSNVSPIQGQALYKLAFATLNDSTWVLTAIPISTSSQAGDGIICLNDQG
CCCCHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCEEEECCCC
QKFWAKGATVCALSASSSWTE
CEEHHCCCEEEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA