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The map label for this gene is ybgF [H]

Identifier: 213158890

GI number: 213158890

Start: 3697579

End: 3698955

Strand: Reverse

Name: ybgF [H]

Synonym: AB57_3590

Alternate gene names: 213158890

Gene position: 3698955-3697579 (Counterclockwise)

Preceding gene: 213158891

Following gene: 213158889

Centisome position: 91.32

GC content: 41.61

Gene sequence:

>1377_bases
TTGAAACGAGCAATGAGTACTCGACATTTGGTGATGATCTCCCTTGGCGGTGCCATAGGTACAGGTCTTTTTCTTGGGTC
TGGCGACGTAATCTCTCAAGCAGGTCCAATTGGCGCAATTATCTCTTATTTCTTGGGCGGTCTAATTGCCTATACCGTTA
TGCTGTGTCTCGGTGAGCTAGCGGTTCATGTCCCTGAATCTGGCTCTTTTGGTGAATACGCACGGCGTTATATCGGTCCA
GGTACGGGGTATATGATTACTTGGCTGTATTGGCTGACTTGGACTGCAACTTTGGGGACTGAGTTTACCGCTGCGGCCTT
GTTGGTTCAGGAGTGGTTTCCATCTACCTCGGTATGGGCTTGGACTCTTTTCTTTGGCGCCTTGGTTTTCTTTCTTAATG
TAAGTTCCACCCGCTTATTTGCAGAGTCTGAATTTTGGCTGGCGCTTGTAAAAGTAATCACCATTATCTGTTTTATTGGT
TTGGGGTTACTGGCGATTTTTGGCTTTATTCCTTATCAGGGGCATGAAACAGCACCATTGTTCAGTAATTTGACTGCTCA
TGGTTGGTTCCCAAATGGTCTTTTCCCAATTTTTGCCACTATGCTTATCGTTAACTTTGCATTTTCTGGCACAGAATTAA
TTGGGGTGGCGGCTGGCGAAGCTGAGAATCCAGCAAAAACAGTTCCTAAGGCAATTAATGCGGCTATTTGGCGCTTATTG
ATTTTCTTTGTTGGTACGATTGTAGTGATTAGCTCACTATTGCCATACCACCTAGCAGGTCTTAGTGCAAATGATGTGAG
CAGTAGCCCATTTGTGACTGTATTTAATTACATTGGTATTCCGTATGCAGAGGATATTATCCGTTTCGTAATTATTACGG
CTTTACTTTCAGCTGCTAATTCGGGTCTATTTGCTGCATCACGTATGATGTGGTCGCTTTCAGCAAAAAATCAATTACCT
AAAATTTTCGCGAAACTCACGCCGTCTGGAACACCTATTATTGCCATTATTGTCACCATGTTTGGTGCTATTCCAGGATT
GCTTTCAGAACAATTTGCACCAGAAACAATTTTTAAAAATTTGTTGGGTGTTGCTGCTTTTACAATGGTTGTCGTTTGGA
TTGCAATTTGTATTTCGCAATTTAACTTCCGTAGACAGTGGTATAAGTCAGGAAAAACAGTAAAAGATCTACGTTTCGCT
GCACCACTTTTTCCTCTTACTCCAATTGTAGGCGGGCTATTCTGTATAGTTACTTGTATCAGTATGGTATTTGATCCTTC
TATGCAAGTGGGCTTTATCTGCTGCATTATTTTTATCTTGCTATGCTATGTCAGCTATTTCATCTTTTATCGTAAAAAAG
ATATAGCTCAAAACTAA

Upstream 100 bases:

>100_bases
ATCCTAAAATGATTTTTACTAAATTGTCGTTACAGTTTTTTATATGCAATCATTAAATTATCGGAATAATGATGCATCGC
AACATGGAAGTTCTGCACCT

Downstream 100 bases:

>100_bases
GTCTTTTGCTTACTTGGTTGTGTTGATTGAAGGCTCCTTATGGGGCCTTTTTTCATTGGCGTAACTTGAGCTTTAAAGTG
AGTTTTATATATTTTTTTTG

Product: amino-acid permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 458; Mature: 458

Protein sequence:

>458_residues
MKRAMSTRHLVMISLGGAIGTGLFLGSGDVISQAGPIGAIISYFLGGLIAYTVMLCLGELAVHVPESGSFGEYARRYIGP
GTGYMITWLYWLTWTATLGTEFTAAALLVQEWFPSTSVWAWTLFFGALVFFLNVSSTRLFAESEFWLALVKVITIICFIG
LGLLAIFGFIPYQGHETAPLFSNLTAHGWFPNGLFPIFATMLIVNFAFSGTELIGVAAGEAENPAKTVPKAINAAIWRLL
IFFVGTIVVISSLLPYHLAGLSANDVSSSPFVTVFNYIGIPYAEDIIRFVIITALLSAANSGLFAASRMMWSLSAKNQLP
KIFAKLTPSGTPIIAIIVTMFGAIPGLLSEQFAPETIFKNLLGVAAFTMVVVWIAICISQFNFRRQWYKSGKTVKDLRFA
APLFPLTPIVGGLFCIVTCISMVFDPSMQVGFICCIIFILLCYVSYFIFYRKKDIAQN

Sequences:

>Translated_458_residues
MKRAMSTRHLVMISLGGAIGTGLFLGSGDVISQAGPIGAIISYFLGGLIAYTVMLCLGELAVHVPESGSFGEYARRYIGP
GTGYMITWLYWLTWTATLGTEFTAAALLVQEWFPSTSVWAWTLFFGALVFFLNVSSTRLFAESEFWLALVKVITIICFIG
LGLLAIFGFIPYQGHETAPLFSNLTAHGWFPNGLFPIFATMLIVNFAFSGTELIGVAAGEAENPAKTVPKAINAAIWRLL
IFFVGTIVVISSLLPYHLAGLSANDVSSSPFVTVFNYIGIPYAEDIIRFVIITALLSAANSGLFAASRMMWSLSAKNQLP
KIFAKLTPSGTPIIAIIVTMFGAIPGLLSEQFAPETIFKNLLGVAAFTMVVVWIAICISQFNFRRQWYKSGKTVKDLRFA
APLFPLTPIVGGLFCIVTCISMVFDPSMQVGFICCIIFILLCYVSYFIFYRKKDIAQN
>Mature_458_residues
MKRAMSTRHLVMISLGGAIGTGLFLGSGDVISQAGPIGAIISYFLGGLIAYTVMLCLGELAVHVPESGSFGEYARRYIGP
GTGYMITWLYWLTWTATLGTEFTAAALLVQEWFPSTSVWAWTLFFGALVFFLNVSSTRLFAESEFWLALVKVITIICFIG
LGLLAIFGFIPYQGHETAPLFSNLTAHGWFPNGLFPIFATMLIVNFAFSGTELIGVAAGEAENPAKTVPKAINAAIWRLL
IFFVGTIVVISSLLPYHLAGLSANDVSSSPFVTVFNYIGIPYAEDIIRFVIITALLSAANSGLFAASRMMWSLSAKNQLP
KIFAKLTPSGTPIIAIIVTMFGAIPGLLSEQFAPETIFKNLLGVAAFTMVVVWIAICISQFNFRRQWYKSGKTVKDLRFA
APLFPLTPIVGGLFCIVTCISMVFDPSMQVGFICCIIFILLCYVSYFIFYRKKDIAQN

Specific function: Transporter For The Intake Of S-Methylmethionine. [C]

COG id: COG0833

COG function: function code E; Amino acid transporters

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the amino acid-polyamine-organocation (APC) superfamily [H]

Homologues:

Organism=Homo sapiens, GI181337167, Length=361, Percent_Identity=24.9307479224377, Blast_Score=67, Evalue=2e-11,
Organism=Homo sapiens, GI258614003, Length=383, Percent_Identity=21.4099216710183, Blast_Score=67, Evalue=4e-11,
Organism=Homo sapiens, GI258614005, Length=383, Percent_Identity=21.4099216710183, Blast_Score=66, Evalue=5e-11,
Organism=Homo sapiens, GI4507047, Length=441, Percent_Identity=21.0884353741497, Blast_Score=65, Evalue=9e-11,
Organism=Homo sapiens, GI114326544, Length=428, Percent_Identity=23.3644859813084, Blast_Score=65, Evalue=1e-10,
Organism=Homo sapiens, GI114326550, Length=428, Percent_Identity=23.3644859813084, Blast_Score=65, Evalue=1e-10,
Organism=Escherichia coli, GI87081708, Length=448, Percent_Identity=52.9017857142857, Blast_Score=492, Evalue=1e-140,
Organism=Escherichia coli, GI1788480, Length=432, Percent_Identity=40.0462962962963, Blast_Score=335, Evalue=4e-93,
Organism=Escherichia coli, GI1786789, Length=458, Percent_Identity=34.2794759825328, Blast_Score=268, Evalue=6e-73,
Organism=Escherichia coli, GI48994972, Length=454, Percent_Identity=37.2246696035242, Blast_Score=261, Evalue=6e-71,
Organism=Escherichia coli, GI1786302, Length=455, Percent_Identity=33.1868131868132, Blast_Score=261, Evalue=9e-71,
Organism=Escherichia coli, GI1789017, Length=443, Percent_Identity=34.0857787810384, Blast_Score=259, Evalue=2e-70,
Organism=Escherichia coli, GI87081915, Length=427, Percent_Identity=36.2997658079625, Blast_Score=258, Evalue=8e-70,
Organism=Escherichia coli, GI1786602, Length=463, Percent_Identity=36.0691144708423, Blast_Score=249, Evalue=2e-67,
Organism=Escherichia coli, GI1790653, Length=390, Percent_Identity=36.4102564102564, Blast_Score=239, Evalue=3e-64,
Organism=Escherichia coli, GI87081869, Length=365, Percent_Identity=24.9315068493151, Blast_Score=67, Evalue=3e-12,
Organism=Escherichia coli, GI2367353, Length=355, Percent_Identity=25.0704225352113, Blast_Score=62, Evalue=6e-11,
Organism=Caenorhabditis elegans, GI17532491, Length=486, Percent_Identity=21.3991769547325, Blast_Score=69, Evalue=5e-12,
Organism=Saccharomyces cerevisiae, GI6320772, Length=418, Percent_Identity=33.4928229665072, Blast_Score=230, Evalue=4e-61,
Organism=Saccharomyces cerevisiae, GI6324061, Length=430, Percent_Identity=31.6279069767442, Blast_Score=213, Evalue=3e-56,
Organism=Saccharomyces cerevisiae, GI6324553, Length=402, Percent_Identity=30.5970149253731, Blast_Score=206, Evalue=4e-54,
Organism=Saccharomyces cerevisiae, GI6322892, Length=410, Percent_Identity=34.1463414634146, Blast_Score=199, Evalue=5e-52,
Organism=Saccharomyces cerevisiae, GI6322967, Length=430, Percent_Identity=30.4651162790698, Blast_Score=192, Evalue=9e-50,
Organism=Saccharomyces cerevisiae, GI6319824, Length=407, Percent_Identity=29.4840294840295, Blast_Score=192, Evalue=1e-49,
Organism=Saccharomyces cerevisiae, GI6324059, Length=458, Percent_Identity=31.0043668122271, Blast_Score=191, Evalue=2e-49,
Organism=Saccharomyces cerevisiae, GI6320717, Length=410, Percent_Identity=29.2682926829268, Blast_Score=189, Evalue=5e-49,
Organism=Saccharomyces cerevisiae, GI6321629, Length=418, Percent_Identity=28.2296650717703, Blast_Score=186, Evalue=8e-48,
Organism=Saccharomyces cerevisiae, GI6324990, Length=434, Percent_Identity=28.5714285714286, Blast_Score=184, Evalue=4e-47,
Organism=Saccharomyces cerevisiae, GI6321053, Length=411, Percent_Identity=26.5206812652068, Blast_Score=179, Evalue=6e-46,
Organism=Saccharomyces cerevisiae, GI6319543, Length=407, Percent_Identity=27.5184275184275, Blast_Score=178, Evalue=2e-45,
Organism=Saccharomyces cerevisiae, GI6324924, Length=409, Percent_Identity=27.8728606356968, Blast_Score=172, Evalue=1e-43,
Organism=Saccharomyces cerevisiae, GI6324981, Length=415, Percent_Identity=30.1204819277108, Blast_Score=166, Evalue=8e-42,
Organism=Saccharomyces cerevisiae, GI6319542, Length=411, Percent_Identity=27.007299270073, Blast_Score=165, Evalue=1e-41,
Organism=Saccharomyces cerevisiae, GI6320251, Length=407, Percent_Identity=26.2899262899263, Blast_Score=161, Evalue=3e-40,
Organism=Saccharomyces cerevisiae, GI6319608, Length=485, Percent_Identity=24.3298969072165, Blast_Score=145, Evalue=1e-35,
Organism=Saccharomyces cerevisiae, GI6320364, Length=500, Percent_Identity=25, Blast_Score=110, Evalue=6e-25,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004841
- InterPro:   IPR002293
- InterPro:   IPR004840 [H]

Pfam domain/function: PF00324 AA_permease [H]

EC number: NA

Molecular weight: Translated: 50045; Mature: 50045

Theoretical pI: Translated: 8.53; Mature: 8.53

Prosite motif: PS00218 AMINO_ACID_PERMEASE_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRAMSTRHLVMISLGGAIGTGLFLGSGDVISQAGPIGAIISYFLGGLIAYTVMLCLGEL
CCCCCCCCCEEEEEECCHHHHCEEECCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH
AVHVPESGSFGEYARRYIGPGTGYMITWLYWLTWTATLGTEFTAAALLVQEWFPSTSVWA
HHCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCHHHH
WTLFFGALVFFLNVSSTRLFAESEFWLALVKVITIICFIGLGLLAIFGFIPYQGHETAPL
HHHHHHHHHHHHHCCCHHEEECHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHH
FSNLTAHGWFPNGLFPIFATMLIVNFAFSGTELIGVAAGEAENPAKTVPKAINAAIWRLL
HHCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHH
IFFVGTIVVISSLLPYHLAGLSANDVSSSPFVTVFNYIGIPYAEDIIRFVIITALLSAAN
HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHC
SGLFAASRMMWSLSAKNQLPKIFAKLTPSGTPIIAIIVTMFGAIPGLLSEQFAPETIFKN
CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHH
LLGVAAFTMVVVWIAICISQFNFRRQWYKSGKTVKDLRFAAPLFPLTPIVGGLFCIVTCI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHH
SMVFDPSMQVGFICCIIFILLCYVSYFIFYRKKDIAQN
HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKRAMSTRHLVMISLGGAIGTGLFLGSGDVISQAGPIGAIISYFLGGLIAYTVMLCLGEL
CCCCCCCCCEEEEEECCHHHHCEEECCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH
AVHVPESGSFGEYARRYIGPGTGYMITWLYWLTWTATLGTEFTAAALLVQEWFPSTSVWA
HHCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCHHHH
WTLFFGALVFFLNVSSTRLFAESEFWLALVKVITIICFIGLGLLAIFGFIPYQGHETAPL
HHHHHHHHHHHHHCCCHHEEECHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHH
FSNLTAHGWFPNGLFPIFATMLIVNFAFSGTELIGVAAGEAENPAKTVPKAINAAIWRLL
HHCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHH
IFFVGTIVVISSLLPYHLAGLSANDVSSSPFVTVFNYIGIPYAEDIIRFVIITALLSAAN
HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHC
SGLFAASRMMWSLSAKNQLPKIFAKLTPSGTPIIAIIVTMFGAIPGLLSEQFAPETIFKN
CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHH
LLGVAAFTMVVVWIAICISQFNFRRQWYKSGKTVKDLRFAAPLFPLTPIVGGLFCIVTCI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHH
SMVFDPSMQVGFICCIIFILLCYVSYFIFYRKKDIAQN
HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]