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The map label for this gene is mmgC [H]

Identifier: 213158530

GI number: 213158530

Start: 2576004

End: 2577140

Strand: Reverse

Name: mmgC [H]

Synonym: AB57_2481

Alternate gene names: 213158530

Gene position: 2577140-2576004 (Counterclockwise)

Preceding gene: 213158531

Following gene: 213158529

Centisome position: 63.63

GC content: 44.94

Gene sequence:

>1137_bases
ATGATTCTAAATGCTGAACAAAGTATGGTTCAGGAGATGATGCGTAACTATGCGCAAAATCAGTTAAAACCAACTGCTGC
ACATCGCGATAAGACCCATGAATTTCCGGCTCAGGAATTAAAAGACTTAGGTGCCCTAGGCGCTATGGGGATGACTGTGC
CCGATGAATGGGGCGGTGCCGGAATGGATTATGTATCTTTGGTACTCGCAATTGAGGAAATTGCCGCAGGCGATGGTGCT
ATTTCGACAATCGTAAGCGTACAAAACTCTTTGATTTGCGGTATTACACTGGCATACGGTTCAGAGCAGCAAAAACAAAC
CTATTTGCCAAAATTTGCCTCTGGTGAATGGCTAGGATGCTTTTGTTTAACTGAGCCACATGTCGGTTCCGATGCGAGCG
CGATTTTATGTAAAGCAGAGCGAGATGGCGACCATTGGGTACTCAATGGCGTAAAGCAATTTATTACCAGTGGTAAAAAT
GCCCAAGTAGCTTTGGTATTTGCGGTTACAGATAAACAGGCTGGCAAAAAAGGCATTTCTTGTTTTCTTGTACCTACGAA
TACACAAGGCTACTTGGTGACTCGTATTGAAGACAAAATGGGTCAACATGCTTCGGACACCGCAACCATTACGTTAGAGG
ACTGCCGGATTCCTTTAGAAAATTTGGTGGGACAAGAAGGCGAAGGTTATAAAATTGCATTATCTAATTTAGCGGCCGGT
CGTATTGGTATTGCTGCTCAGTCTGTTGGTATGGCAAGAGCGGCTTTTGATGCTGCTGTCCAATACGCAAATGAACGTAA
GGCCTTCGGTGTAGAGCTGGTTCAGCATCAGGCGGTTGGTTTTCGCTTAGCTGATATGGCAACTCAGATTGAAGCGGCAC
ATCAGCTAGTTTTGCATGCTGCAACTTTAAAAGATGCGGGACTACCTTGTTTAAAAGAGGCCTCAATGGCGAAACTCTTT
GCATCAACTATGGCTGAGCGAGTATGTTCGGATGCAATCCAGATTCATGGCGGTTATGGATACGTCAGTGATTTCCCTGT
TGAGAGAATTTATCGGGATGTTCGTGTAAGCCAGATTTATGAAGGTGCTTCTGATATTCAGCGCTTGGTGATTGCTCGTG
AAGTGGCTCAAGTTTAG

Upstream 100 bases:

>100_bases
GGTTGCCCATATTGCTGAAAACTCTTACTTAAATGGTGAAGTCATCCGTCTAGATGGTGCAATTCGCATGGCAGCAAAAT
AATAAAATAAGGATGTTGAA

Downstream 100 bases:

>100_bases
ATCATAAGGTATTGAGTTTTTAAACTTAAAACTGCAAGAAGCCGCACACTATGTGCGGTTTCTTGCAATTGAAATGATGC
ATTTTTGCTATTAGTTTTGT

Product: acyl-CoA dehydrogenase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 378; Mature: 378

Protein sequence:

>378_residues
MILNAEQSMVQEMMRNYAQNQLKPTAAHRDKTHEFPAQELKDLGALGAMGMTVPDEWGGAGMDYVSLVLAIEEIAAGDGA
ISTIVSVQNSLICGITLAYGSEQQKQTYLPKFASGEWLGCFCLTEPHVGSDASAILCKAERDGDHWVLNGVKQFITSGKN
AQVALVFAVTDKQAGKKGISCFLVPTNTQGYLVTRIEDKMGQHASDTATITLEDCRIPLENLVGQEGEGYKIALSNLAAG
RIGIAAQSVGMARAAFDAAVQYANERKAFGVELVQHQAVGFRLADMATQIEAAHQLVLHAATLKDAGLPCLKEASMAKLF
ASTMAERVCSDAIQIHGGYGYVSDFPVERIYRDVRVSQIYEGASDIQRLVIAREVAQV

Sequences:

>Translated_378_residues
MILNAEQSMVQEMMRNYAQNQLKPTAAHRDKTHEFPAQELKDLGALGAMGMTVPDEWGGAGMDYVSLVLAIEEIAAGDGA
ISTIVSVQNSLICGITLAYGSEQQKQTYLPKFASGEWLGCFCLTEPHVGSDASAILCKAERDGDHWVLNGVKQFITSGKN
AQVALVFAVTDKQAGKKGISCFLVPTNTQGYLVTRIEDKMGQHASDTATITLEDCRIPLENLVGQEGEGYKIALSNLAAG
RIGIAAQSVGMARAAFDAAVQYANERKAFGVELVQHQAVGFRLADMATQIEAAHQLVLHAATLKDAGLPCLKEASMAKLF
ASTMAERVCSDAIQIHGGYGYVSDFPVERIYRDVRVSQIYEGASDIQRLVIAREVAQV
>Mature_378_residues
MILNAEQSMVQEMMRNYAQNQLKPTAAHRDKTHEFPAQELKDLGALGAMGMTVPDEWGGAGMDYVSLVLAIEEIAAGDGA
ISTIVSVQNSLICGITLAYGSEQQKQTYLPKFASGEWLGCFCLTEPHVGSDASAILCKAERDGDHWVLNGVKQFITSGKN
AQVALVFAVTDKQAGKKGISCFLVPTNTQGYLVTRIEDKMGQHASDTATITLEDCRIPLENLVGQEGEGYKIALSNLAAG
RIGIAAQSVGMARAAFDAAVQYANERKAFGVELVQHQAVGFRLADMATQIEAAHQLVLHAATLKDAGLPCLKEASMAKLF
ASTMAERVCSDAIQIHGGYGYVSDFPVERIYRDVRVSQIYEGASDIQRLVIAREVAQV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the acyl-CoA dehydrogenase family [H]

Homologues:

Organism=Homo sapiens, GI4557233, Length=370, Percent_Identity=49.1891891891892, Blast_Score=363, Evalue=1e-101,
Organism=Homo sapiens, GI4501859, Length=370, Percent_Identity=41.3513513513514, Blast_Score=302, Evalue=4e-82,
Organism=Homo sapiens, GI4557231, Length=375, Percent_Identity=38.4, Blast_Score=260, Evalue=2e-69,
Organism=Homo sapiens, GI187960098, Length=375, Percent_Identity=38.4, Blast_Score=259, Evalue=2e-69,
Organism=Homo sapiens, GI226958412, Length=375, Percent_Identity=35.7333333333333, Blast_Score=257, Evalue=1e-68,
Organism=Homo sapiens, GI7656849, Length=383, Percent_Identity=36.0313315926893, Blast_Score=251, Evalue=7e-67,
Organism=Homo sapiens, GI226958414, Length=335, Percent_Identity=36.7164179104478, Blast_Score=241, Evalue=1e-63,
Organism=Homo sapiens, GI21361497, Length=352, Percent_Identity=36.9318181818182, Blast_Score=225, Evalue=6e-59,
Organism=Homo sapiens, GI4501857, Length=381, Percent_Identity=32.0209973753281, Blast_Score=215, Evalue=5e-56,
Organism=Homo sapiens, GI76496475, Length=384, Percent_Identity=33.8541666666667, Blast_Score=196, Evalue=3e-50,
Organism=Homo sapiens, GI4557235, Length=384, Percent_Identity=33.8541666666667, Blast_Score=196, Evalue=3e-50,
Organism=Homo sapiens, GI4503943, Length=379, Percent_Identity=31.3984168865435, Blast_Score=172, Evalue=5e-43,
Organism=Homo sapiens, GI7669494, Length=362, Percent_Identity=31.4917127071823, Blast_Score=160, Evalue=3e-39,
Organism=Homo sapiens, GI38505218, Length=286, Percent_Identity=33.2167832167832, Blast_Score=135, Evalue=4e-32,
Organism=Homo sapiens, GI48976061, Length=295, Percent_Identity=31.5254237288136, Blast_Score=126, Evalue=3e-29,
Organism=Homo sapiens, GI211971008, Length=295, Percent_Identity=31.5254237288136, Blast_Score=126, Evalue=4e-29,
Organism=Homo sapiens, GI218563752, Length=257, Percent_Identity=25.6809338521401, Blast_Score=69, Evalue=8e-12,
Organism=Escherichia coli, GI87081958, Length=349, Percent_Identity=31.8051575931232, Blast_Score=157, Evalue=1e-39,
Organism=Escherichia coli, GI1786223, Length=381, Percent_Identity=26.7716535433071, Blast_Score=137, Evalue=2e-33,
Organism=Escherichia coli, GI87081702, Length=365, Percent_Identity=27.3972602739726, Blast_Score=105, Evalue=7e-24,
Organism=Escherichia coli, GI87082384, Length=265, Percent_Identity=31.3207547169811, Blast_Score=102, Evalue=6e-23,
Organism=Caenorhabditis elegans, GI17508101, Length=373, Percent_Identity=40.4825737265416, Blast_Score=291, Evalue=3e-79,
Organism=Caenorhabditis elegans, GI17506239, Length=372, Percent_Identity=37.6344086021505, Blast_Score=280, Evalue=6e-76,
Organism=Caenorhabditis elegans, GI17570075, Length=376, Percent_Identity=37.5, Blast_Score=259, Evalue=2e-69,
Organism=Caenorhabditis elegans, GI17569725, Length=374, Percent_Identity=36.6310160427808, Blast_Score=258, Evalue=3e-69,
Organism=Caenorhabditis elegans, GI17534899, Length=378, Percent_Identity=36.5079365079365, Blast_Score=250, Evalue=7e-67,
Organism=Caenorhabditis elegans, GI17538396, Length=373, Percent_Identity=35.3887399463807, Blast_Score=248, Evalue=3e-66,
Organism=Caenorhabditis elegans, GI17533517, Length=369, Percent_Identity=34.9593495934959, Blast_Score=238, Evalue=5e-63,
Organism=Caenorhabditis elegans, GI71990804, Length=293, Percent_Identity=39.2491467576792, Blast_Score=227, Evalue=7e-60,
Organism=Caenorhabditis elegans, GI71985184, Length=355, Percent_Identity=36.6197183098592, Blast_Score=216, Evalue=1e-56,
Organism=Caenorhabditis elegans, GI71982178, Length=272, Percent_Identity=36.7647058823529, Blast_Score=192, Evalue=2e-49,
Organism=Caenorhabditis elegans, GI32563615, Length=231, Percent_Identity=39.8268398268398, Blast_Score=189, Evalue=2e-48,
Organism=Caenorhabditis elegans, GI17534353, Length=364, Percent_Identity=32.1428571428571, Blast_Score=181, Evalue=6e-46,
Organism=Caenorhabditis elegans, GI17551932, Length=376, Percent_Identity=29.2553191489362, Blast_Score=169, Evalue=3e-42,
Organism=Caenorhabditis elegans, GI71985192, Length=298, Percent_Identity=33.8926174496644, Blast_Score=157, Evalue=6e-39,
Organism=Caenorhabditis elegans, GI17505929, Length=376, Percent_Identity=27.1276595744681, Blast_Score=153, Evalue=1e-37,
Organism=Caenorhabditis elegans, GI17531909, Length=235, Percent_Identity=36.5957446808511, Blast_Score=148, Evalue=5e-36,
Organism=Caenorhabditis elegans, GI17562446, Length=292, Percent_Identity=30.8219178082192, Blast_Score=119, Evalue=2e-27,
Organism=Caenorhabditis elegans, GI17531913, Length=177, Percent_Identity=36.7231638418079, Blast_Score=105, Evalue=3e-23,
Organism=Caenorhabditis elegans, GI86563381, Length=324, Percent_Identity=27.7777777777778, Blast_Score=84, Evalue=1e-16,
Organism=Caenorhabditis elegans, GI86563383, Length=324, Percent_Identity=27.7777777777778, Blast_Score=84, Evalue=2e-16,
Organism=Caenorhabditis elegans, GI17540912, Length=355, Percent_Identity=24.2253521126761, Blast_Score=66, Evalue=2e-11,
Organism=Drosophila melanogaster, GI21356377, Length=373, Percent_Identity=45.8445040214477, Blast_Score=342, Evalue=2e-94,
Organism=Drosophila melanogaster, GI24646207, Length=373, Percent_Identity=43.6997319034853, Blast_Score=319, Evalue=2e-87,
Organism=Drosophila melanogaster, GI24666513, Length=372, Percent_Identity=39.247311827957, Blast_Score=291, Evalue=4e-79,
Organism=Drosophila melanogaster, GI24660351, Length=376, Percent_Identity=39.6276595744681, Blast_Score=265, Evalue=5e-71,
Organism=Drosophila melanogaster, GI21355753, Length=379, Percent_Identity=34.3007915567282, Blast_Score=229, Evalue=2e-60,
Organism=Drosophila melanogaster, GI281363737, Length=355, Percent_Identity=36.6197183098592, Blast_Score=218, Evalue=5e-57,
Organism=Drosophila melanogaster, GI19920834, Length=377, Percent_Identity=32.0954907161804, Blast_Score=172, Evalue=2e-43,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006089
- InterPro:   IPR006092
- InterPro:   IPR006090
- InterPro:   IPR006091
- InterPro:   IPR009075
- InterPro:   IPR013786
- InterPro:   IPR009100 [H]

Pfam domain/function: PF00441 Acyl-CoA_dh_1; PF02770 Acyl-CoA_dh_M; PF02771 Acyl-CoA_dh_N [H]

EC number: NA

Molecular weight: Translated: 40705; Mature: 40705

Theoretical pI: Translated: 5.24; Mature: 5.24

Prosite motif: PS00073 ACYL_COA_DH_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MILNAEQSMVQEMMRNYAQNQLKPTAAHRDKTHEFPAQELKDLGALGAMGMTVPDEWGGA
CEECCHHHHHHHHHHHHHHHCCCCCHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCC
GMDYVSLVLAIEEIAAGDGAISTIVSVQNSLICGITLAYGSEQQKQTYLPKFASGEWLGC
CHHHHHHHHHHHHHHCCCHHHHHHHHHHCCEEEEEEEECCCCHHHHHCCCCCCCCCEEEE
FCLTEPHVGSDASAILCKAERDGDHWVLNGVKQFITSGKNAQVALVFAVTDKQAGKKGIS
EEECCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCCCCE
CFLVPTNTQGYLVTRIEDKMGQHASDTATITLEDCRIPLENLVGQEGEGYKIALSNLAAG
EEEEECCCCCEEEEEEHHHCCCCCCCCEEEEECCCCCCHHHHCCCCCCCEEEEECCCCCC
RIGIAAQSVGMARAAFDAAVQYANERKAFGVELVQHQAVGFRLADMATQIEAAHQLVLHA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH
ATLKDAGLPCLKEASMAKLFASTMAERVCSDAIQIHGGYGYVSDFPVERIYRDVRVSQIY
HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCHHHHHHHHHHHHHH
EGASDIQRLVIAREVAQV
CCHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MILNAEQSMVQEMMRNYAQNQLKPTAAHRDKTHEFPAQELKDLGALGAMGMTVPDEWGGA
CEECCHHHHHHHHHHHHHHHCCCCCHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCC
GMDYVSLVLAIEEIAAGDGAISTIVSVQNSLICGITLAYGSEQQKQTYLPKFASGEWLGC
CHHHHHHHHHHHHHHCCCHHHHHHHHHHCCEEEEEEEECCCCHHHHHCCCCCCCCCEEEE
FCLTEPHVGSDASAILCKAERDGDHWVLNGVKQFITSGKNAQVALVFAVTDKQAGKKGIS
EEECCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCCCCE
CFLVPTNTQGYLVTRIEDKMGQHASDTATITLEDCRIPLENLVGQEGEGYKIALSNLAAG
EEEEECCCCCEEEEEEHHHCCCCCCCCEEEEECCCCCCHHHHCCCCCCCEEEEECCCCCC
RIGIAAQSVGMARAAFDAAVQYANERKAFGVELVQHQAVGFRLADMATQIEAAHQLVLHA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH
ATLKDAGLPCLKEASMAKLFASTMAERVCSDAIQIHGGYGYVSDFPVERIYRDVRVSQIY
HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCHHHHHHHHHHHHHH
EGASDIQRLVIAREVAQV
CCHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8759838; 8969508; 9384377 [H]