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The map label for this gene is hpcD

Identifier: 213158479

GI number: 213158479

Start: 2515668

End: 2516027

Strand: Reverse

Name: hpcD

Synonym: AB57_2428

Alternate gene names: NA

Gene position: 2516027-2515668 (Counterclockwise)

Preceding gene: 213158480

Following gene: 213158475

Centisome position: 62.12

GC content: 36.94

Gene sequence:

>360_bases
ATGCCGCACGTTGTAGTTGATTATTCAGATAACTTAACTGGACTAAATGCAAAACAATTACTTGAAGAAATTAATACCAC
GCTCATTGAAACAGAGTTGTTTAGTCCAGAAGACATTAAAAGCCGTGCGCGTAGAGATGAGGTTTTTCTGATTGGCTTAG
GGGTTGATCAAGCCTATATCCATGTAAAAGCCTATATTTTGTCGGGAAGAACTGCTGAACAAAAACAGCTTGTGGGTGAG
CAATTATTAGCGGCGCTCAGCAACAAAAAATATCTACCACAAGAGTTTAATAAAGAAATTCAATTGTGTGTTGAGCTTAT
AGACATGCCAAGAGACGATTATTTTAAGCAAGTTGTATAA

Upstream 100 bases:

>100_bases
ACCAGCCCTCGAATGGGATATGATCAGGTTCGATTAGCTTTATTATTTATTGAATAAAGTTTAATTGGCTTAATGACTTA
TTATATAAATTGAGGTGGCT

Downstream 100 bases:

>100_bases
CTCTAAAAAACGCAATTTCGATCAAGAATAGCAATGAGCACTATGTAAAAGTAGTCTGATCTTATTACCGACATCTACTT
ACTTTTAAAGTGAGTCTAGT

Product: 5-carboxymethyl-2-hydroxymuconate isomerase

Products: 5-carboxy-2-oxohept-3-enedioate

Alternate protein names: 5-Carboxymethyl-2-Hydroxymuconate Delta Isomerase

Number of amino acids: Translated: 119; Mature: 118

Protein sequence:

>119_residues
MPHVVVDYSDNLTGLNAKQLLEEINTTLIETELFSPEDIKSRARRDEVFLIGLGVDQAYIHVKAYILSGRTAEQKQLVGE
QLLAALSNKKYLPQEFNKEIQLCVELIDMPRDDYFKQVV

Sequences:

>Translated_119_residues
MPHVVVDYSDNLTGLNAKQLLEEINTTLIETELFSPEDIKSRARRDEVFLIGLGVDQAYIHVKAYILSGRTAEQKQLVGE
QLLAALSNKKYLPQEFNKEIQLCVELIDMPRDDYFKQVV
>Mature_118_residues
PHVVVDYSDNLTGLNAKQLLEEINTTLIETELFSPEDIKSRARRDEVFLIGLGVDQAYIHVKAYILSGRTAEQKQLVGEQ
LLAALSNKKYLPQEFNKEIQLCVELIDMPRDDYFKQVV

Specific function: Unknown

COG id: COG3232

COG function: function code E; 5-carboxymethyl-2-hydroxymuconate isomerase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 5.3.3.10

Molecular weight: Translated: 13625; Mature: 13494

Theoretical pI: Translated: 4.60; Mature: 4.60

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPHVVVDYSDNLTGLNAKQLLEEINTTLIETELFSPEDIKSRARRDEVFLIGLGVDQAYI
CCCEEEECCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCEEEEEECCCHHHH
HVKAYILSGRTAEQKQLVGEQLLAALSNKKYLPQEFNKEIQLCVELIDMPRDDYFKQVV
EEEEEEECCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHCC
>Mature Secondary Structure 
PHVVVDYSDNLTGLNAKQLLEEINTTLIETELFSPEDIKSRARRDEVFLIGLGVDQAYI
CCEEEECCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCEEEEEECCCHHHH
HVKAYILSGRTAEQKQLVGEQLLAALSNKKYLPQEFNKEIQLCVELIDMPRDDYFKQVV
EEEEEEECCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: 5-carboxymethyl-2-hydroxymuconate

Specific reaction: 5-carboxymethyl-2-hydroxymuconate = 5-carboxy-2-oxohept-3-enedioate

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA