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The map label for this gene is ydjN [H]

Identifier: 213158196

GI number: 213158196

Start: 3006778

End: 3008172

Strand: Reverse

Name: ydjN [H]

Synonym: AB57_2913

Alternate gene names: 213158196

Gene position: 3008172-3006778 (Counterclockwise)

Preceding gene: 213158197

Following gene: 213158195

Centisome position: 74.27

GC content: 41.43

Gene sequence:

>1395_bases
ATGAATATACCCTTAATCATCAATATTGTGGTTTTTGTCGGGTTAATATTTTTACTCGCCCAAACACGTAAAACGGACTG
GAGCTTATCTAAAAAAGTTCTAGCTGGCTTAATTTTAGGTGTAGTGTTTGGTTTAGGACTACATTTGATTTATGGCGGTG
GCCATCCGATTCTTGCTGAATCTATTAGCTGGTTTAATATTGTTGGTAACGGCTATGTAAAACTTTTACAAATGGTCGTG
ATGCCTTTGGTCTTTGTTTCGATTTTAGGTGCGGTAGCGAAGCTACACCAAGCTTCTTCTTTAGGAAAAATCAGCTTCTA
CACCATCGGGACTTTGTTATTTACCACACTCATCGCTGCGCTGGTTGGGGTATTTGTGACGAACTTGTTTGGTTTAACTG
CCAAAGGTTTGGTACAAGGAGCGGCTGAAACAGCTCGACTTACTGCAATTCAGACCGACTATGTGGGTAAAGTAACAGAC
TTAAGTGTACCTCAATTTATTCTTTCTTTTATTCCGAGTAACCCTTTTGCTGAGTTAACGGGTGCAAATCCGACTTCAAT
TATTAGCGTGGTTATCTTTGCTGTCTTTTTAGGAATAGCAGCACTCAACTTAATGAAAGATGACGCAGAAAAAGGTCAAC
GTATTCTGACGGCTATTCAAACATTACAGTCTTGGGTAATGAAGCTTGTTCGTTTAGTGATGACACTTACACCATATGGT
GTTTTTGCCCTCATGACGAAAGTTGTGGCAAGTTCAAATGTCGCAGATATCTTGAACCTAGGTGGTTTCTTGGTGGCGTC
TTATTTAGGTTTAGCGATTATGTTCGTCGTGCATGCCATTATTTTGACTCTGACCGGTGTTTCTCCACTTAAGTTCTTCA
AGAAAGTTGCTCCGGTTCTAACATTCGCGTTTACGAGTCGTTCAAGTGCAGCAAGTATTCCACTGAGCATTGAAGCGCAA
ACTCGTCGTTTGGGTGTGCCTGAGTCTATTGCAAGTTTCTCTGCTTCTTTTGGTGCCACTATTGGACAAAATGGTTGTGC
GGGTTTATATCCAGCCATGCTCGCAGTCATGGTTGCGCCAACTATGGGTATTAACACCCTAGACCCAATGTGGATTGCTT
CGTTAGTGGGTATTGTGACTTTAAGTTCAATTGGTGTAGCAGGTGTTGGTGGTGGTGCAACTTTCGCAGCATTGATCGTA
CTTCCTGCTATGGGCTTACCTGTAACATTGGTTGCTCTTCTTATTTCAATTGAACCACTCATTGATATGGGACGTACTGC
GTTAAACGTAAATGGTTCGATGACTGCTGGTGTAGTTACAAGCCAATTTATGGGGCAGACCGACAAAGCTATAATGAATA
GCGAAGATGAAATTGAATTAACTCAACATCATTAA

Upstream 100 bases:

>100_bases
GCATGCTAGAAAATTGTTGAAAAGGGTAGTTTATATAGGCCGGCTATGGTCAAATATGCCCCCTTAAAAGATGACACAAG
CAATAATTTGGAGTTTGGGA

Downstream 100 bases:

>100_bases
GAGTTAATATTAAACGGCTCTCCACTCTGGATGAGCCGTTTTTTTATATGTGTAACTTGCAACTGTGATGTTAATTTTTA
AAAAACTGTATCTATTTTTC

Product: transport protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 464; Mature: 464

Protein sequence:

>464_residues
MNIPLIINIVVFVGLIFLLAQTRKTDWSLSKKVLAGLILGVVFGLGLHLIYGGGHPILAESISWFNIVGNGYVKLLQMVV
MPLVFVSILGAVAKLHQASSLGKISFYTIGTLLFTTLIAALVGVFVTNLFGLTAKGLVQGAAETARLTAIQTDYVGKVTD
LSVPQFILSFIPSNPFAELTGANPTSIISVVIFAVFLGIAALNLMKDDAEKGQRILTAIQTLQSWVMKLVRLVMTLTPYG
VFALMTKVVASSNVADILNLGGFLVASYLGLAIMFVVHAIILTLTGVSPLKFFKKVAPVLTFAFTSRSSAASIPLSIEAQ
TRRLGVPESIASFSASFGATIGQNGCAGLYPAMLAVMVAPTMGINTLDPMWIASLVGIVTLSSIGVAGVGGGATFAALIV
LPAMGLPVTLVALLISIEPLIDMGRTALNVNGSMTAGVVTSQFMGQTDKAIMNSEDEIELTQHH

Sequences:

>Translated_464_residues
MNIPLIINIVVFVGLIFLLAQTRKTDWSLSKKVLAGLILGVVFGLGLHLIYGGGHPILAESISWFNIVGNGYVKLLQMVV
MPLVFVSILGAVAKLHQASSLGKISFYTIGTLLFTTLIAALVGVFVTNLFGLTAKGLVQGAAETARLTAIQTDYVGKVTD
LSVPQFILSFIPSNPFAELTGANPTSIISVVIFAVFLGIAALNLMKDDAEKGQRILTAIQTLQSWVMKLVRLVMTLTPYG
VFALMTKVVASSNVADILNLGGFLVASYLGLAIMFVVHAIILTLTGVSPLKFFKKVAPVLTFAFTSRSSAASIPLSIEAQ
TRRLGVPESIASFSASFGATIGQNGCAGLYPAMLAVMVAPTMGINTLDPMWIASLVGIVTLSSIGVAGVGGGATFAALIV
LPAMGLPVTLVALLISIEPLIDMGRTALNVNGSMTAGVVTSQFMGQTDKAIMNSEDEIELTQHH
>Mature_464_residues
MNIPLIINIVVFVGLIFLLAQTRKTDWSLSKKVLAGLILGVVFGLGLHLIYGGGHPILAESISWFNIVGNGYVKLLQMVV
MPLVFVSILGAVAKLHQASSLGKISFYTIGTLLFTTLIAALVGVFVTNLFGLTAKGLVQGAAETARLTAIQTDYVGKVTD
LSVPQFILSFIPSNPFAELTGANPTSIISVVIFAVFLGIAALNLMKDDAEKGQRILTAIQTLQSWVMKLVRLVMTLTPYG
VFALMTKVVASSNVADILNLGGFLVASYLGLAIMFVVHAIILTLTGVSPLKFFKKVAPVLTFAFTSRSSAASIPLSIEAQ
TRRLGVPESIASFSASFGATIGQNGCAGLYPAMLAVMVAPTMGINTLDPMWIASLVGIVTLSSIGVAGVGGGATFAALIV
LPAMGLPVTLVALLISIEPLIDMGRTALNVNGSMTAGVVTSQFMGQTDKAIMNSEDEIELTQHH

Specific function: Unknown

COG id: COG1823

COG function: function code R; Predicted Na+/dicarboxylate symporter

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the sodium:dicarboxylate (SDF) symporter (TC 2.A.23) family [H]

Homologues:

Organism=Homo sapiens, GI223468566, Length=289, Percent_Identity=28.0276816608997, Blast_Score=99, Evalue=1e-20,
Organism=Homo sapiens, GI223468564, Length=281, Percent_Identity=27.7580071174377, Blast_Score=99, Evalue=1e-20,
Organism=Homo sapiens, GI5032093, Length=289, Percent_Identity=28.0276816608997, Blast_Score=94, Evalue=2e-19,
Organism=Homo sapiens, GI194239697, Length=439, Percent_Identity=24.1457858769932, Blast_Score=90, Evalue=4e-18,
Organism=Homo sapiens, GI40254478, Length=485, Percent_Identity=23.9175257731959, Blast_Score=89, Evalue=1e-17,
Organism=Homo sapiens, GI21314632, Length=435, Percent_Identity=25.2873563218391, Blast_Score=89, Evalue=1e-17,
Organism=Homo sapiens, GI66773030, Length=254, Percent_Identity=29.9212598425197, Blast_Score=86, Evalue=8e-17,
Organism=Homo sapiens, GI169790839, Length=478, Percent_Identity=23.8493723849372, Blast_Score=84, Evalue=3e-16,
Organism=Homo sapiens, GI4827012, Length=311, Percent_Identity=27.3311897106109, Blast_Score=77, Evalue=4e-14,
Organism=Escherichia coli, GI1788024, Length=463, Percent_Identity=80.1295896328294, Blast_Score=704, Evalue=0.0,
Organism=Escherichia coli, GI1789947, Length=430, Percent_Identity=24.8837209302326, Blast_Score=118, Evalue=1e-27,
Organism=Escherichia coli, GI1790514, Length=448, Percent_Identity=26.3392857142857, Blast_Score=115, Evalue=4e-27,
Organism=Caenorhabditis elegans, GI71996953, Length=481, Percent_Identity=26.8191268191268, Blast_Score=112, Evalue=6e-25,
Organism=Caenorhabditis elegans, GI71983106, Length=451, Percent_Identity=26.3858093126386, Blast_Score=109, Evalue=3e-24,
Organism=Caenorhabditis elegans, GI71983099, Length=451, Percent_Identity=26.3858093126386, Blast_Score=108, Evalue=5e-24,
Organism=Caenorhabditis elegans, GI193206505, Length=453, Percent_Identity=24.9448123620309, Blast_Score=99, Evalue=5e-21,
Organism=Caenorhabditis elegans, GI193206654, Length=434, Percent_Identity=24.8847926267281, Blast_Score=95, Evalue=9e-20,
Organism=Caenorhabditis elegans, GI17541374, Length=452, Percent_Identity=23.8938053097345, Blast_Score=94, Evalue=1e-19,
Organism=Caenorhabditis elegans, GI17537407, Length=479, Percent_Identity=23.7995824634656, Blast_Score=87, Evalue=2e-17,
Organism=Drosophila melanogaster, GI24583025, Length=413, Percent_Identity=25.4237288135593, Blast_Score=89, Evalue=7e-18,
Organism=Drosophila melanogaster, GI17137668, Length=413, Percent_Identity=25.4237288135593, Blast_Score=89, Evalue=7e-18,
Organism=Drosophila melanogaster, GI24583023, Length=413, Percent_Identity=25.4237288135593, Blast_Score=89, Evalue=7e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001991 [H]

Pfam domain/function: PF00375 SDF [H]

EC number: NA

Molecular weight: Translated: 48728; Mature: 48728

Theoretical pI: Translated: 9.51; Mature: 9.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHCCCCEEECCCCCHHHHHHHHHHCCCHHHHHCCCCCEEECCCC
>Mature Secondary Structure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HHCCCCEEECCCCCHHHHHHHHHHCCCHHHHHCCCCCEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9097039; 9278503 [H]